RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 LPIN1Q14693 890 aa22.59■■□□□ 1.21
CHD3-204ENST00000439235 DCAF4L1Q3SXM0 396 aa22.59■■□□□ 1.21
CHD3-204ENST00000439235 TCP11X2Q5H9J9 407 aa22.59■■□□□ 1.21
CHD3-204ENST00000439235 FAM186BQ8IYM0 893 aa22.59■■□□□ 1.21
CHD3-204ENST00000439235 ZBTB45Q96K62 511 aaPredicted RBP22.59■■□□□ 1.21
CHD3-204ENST00000439235 METTL14Q9HCE5 456 aaKnown RBP22.59■■□□□ 1.21
CHD3-204ENST00000439235 ABLIM1O14639 778 aa22.58■■□□□ 1.21
CHD3-204ENST00000439235 OGTO15294 1046 aa22.58■■□□□ 1.21
CHD3-204ENST00000439235 EXTL3O43909 919 aa22.58■■□□□ 1.21
CHD3-204ENST00000439235 AKAP3O75969 853 aa22.58■■□□□ 1.21
CHD3-204ENST00000439235 PARNO95453 639 aaKnown RBP22.58■■□□□ 1.21
CHD3-204ENST00000439235 HARSP12081 509 aaKnown RBP22.58■■□□□ 1.21
CHD3-204ENST00000439235 MARSP56192 900 aaKnown RBP22.58■■□□□ 1.21
CHD3-204ENST00000439235 KYAT1Q16773 422 aa22.58■■□□□ 1.21
CHD3-204ENST00000439235 EEF1DP3Q658K8 133 aa22.58■■□□□ 1.21
CHD3-204ENST00000439235 SLC27A1Q6PCB7 646 aa22.58■■□□□ 1.21
CHD3-204ENST00000439235 ZBTB33Q86T24 672 aa22.58■■□□□ 1.21
CHD3-204ENST00000439235 IRF2BP1Q8IU81 584 aa22.58■■□□□ 1.21
CHD3-204ENST00000439235 SAAL1Q96ER3 474 aa22.58■■□□□ 1.21
CHD3-204ENST00000439235 CDT1Q9H211 546 aa22.58■■□□□ 1.21
CHD3-204ENST00000439235 ERVK-5Q9HDB9 667 aa22.58■■□□□ 1.21
CHD3-204ENST00000439235 CHST12Q9NRB3 414 aa22.58■■□□□ 1.21
CHD3-204ENST00000439235 TMEM39AQ9NV64 488 aa22.58■■□□□ 1.21
CHD3-204ENST00000439235 TBX21Q9UL17 535 aa22.58■■□□□ 1.21
CHD3-204ENST00000439235 ST3GAL5Q9UNP4 418 aa22.58■■□□□ 1.21
CHD3-204ENST00000439235 TPM2P07951 284 aa22.57■■□□□ 1.2
CHD3-204ENST00000439235 ATP1A3P13637 1013 aa22.57■■□□□ 1.2
CHD3-204ENST00000439235 HOXA11P31270 313 aaPredicted RBP22.57■■□□□ 1.2
CHD3-204ENST00000439235 MTIF2P46199 727 aaKnown RBP22.57■■□□□ 1.2
CHD3-204ENST00000439235 CASP4P49662 377 aa22.57■■□□□ 1.2
CHD3-204ENST00000439235 NFX1Q12986 1120 aaKnown RBP22.57■■□□□ 1.2
CHD3-204ENST00000439235 FAM43BQ6ZT52 329 aaPredicted RBP22.57■■□□□ 1.2
CHD3-204ENST00000439235 FRMD5Q7Z6J6 570 aa22.57■■□□□ 1.2
CHD3-204ENST00000439235 CREBRFQ8IUR6 639 aa22.57■■□□□ 1.2
CHD3-204ENST00000439235 FBXL18Q96ME1 805 aa22.57■■□□□ 1.2
CHD3-204ENST00000439235 HAPLN2Q9GZV7 340 aa22.57■■□□□ 1.2
CHD3-204ENST00000439235 ARMCX3Q9UH62 379 aaPredicted RBP22.57■■□□□ 1.2
CHD3-204ENST00000439235 LIMA1Q9UHB6 759 aaKnown RBP22.57■■□□□ 1.2
CHD3-204ENST00000439235 SERPINC1P01008 464 aa22.56■■□□□ 1.2
CHD3-204ENST00000439235 KRT13P13646 458 aa22.56■■□□□ 1.2
CHD3-204ENST00000439235 CD52P31358 61 aa22.56■■□□□ 1.2
CHD3-204ENST00000439235 PLCB2Q00722 1185 aa22.56■■□□□ 1.2
CHD3-204ENST00000439235 SNRNP35Q16560 246 aaKnown RBP22.56■■□□□ 1.2
CHD3-204ENST00000439235 INTS8Q75QN2 995 aaKnown RBP22.56■■□□□ 1.2
CHD3-204ENST00000439235 CDR2LQ86X02 465 aaPredicted RBP22.56■■□□□ 1.2
CHD3-204ENST00000439235 FAM213AQ9BRX8 229 aa22.56■■□□□ 1.2
CHD3-204ENST00000439235 AGO3Q9H9G7 860 aaKnown RBP22.56■■□□□ 1.2
CHD3-204ENST00000439235 PADI3Q9ULW8 664 aa22.56■■□□□ 1.2
CHD3-204ENST00000439235 GOLGA8IPA6NC78 632 aa22.55■■□□□ 1.2
CHD3-204ENST00000439235 ZNF233A6NK53 670 aa22.55■■□□□ 1.2
CHD3-204ENST00000439235 GOLGA8JA6NMD2 632 aa22.55■■□□□ 1.2
CHD3-204ENST00000439235 FANCCQ00597 558 aa22.55■■□□□ 1.2
CHD3-204ENST00000439235 PPP2R3AQ06190 1150 aa22.55■■□□□ 1.2
CHD3-204ENST00000439235 KRT31Q15323 416 aa22.55■■□□□ 1.2
CHD3-204ENST00000439235 SARM1Q6SZW1 724 aa22.55■■□□□ 1.2
CHD3-204ENST00000439235 PPP1R12CQ9BZL4 782 aa22.55■■□□□ 1.2
CHD3-204ENST00000439235 TRIM6Q9C030 488 aaPredicted RBP22.55■■□□□ 1.2
CHD3-204ENST00000439235 NPTXRO95502 500 aa22.54■■□□□ 1.2
CHD3-204ENST00000439235 ZSCAN20P17040 1043 aaPredicted RBP22.54■■□□□ 1.2
CHD3-204ENST00000439235 ENPEPQ07075 957 aa22.54■■□□□ 1.2
CHD3-204ENST00000439235 MBTPS1Q14703 1052 aa22.54■■□□□ 1.2
CHD3-204ENST00000439235 FILIP1LQ4L180 1135 aa22.54■■□□□ 1.2
CHD3-204ENST00000439235 TWF2Q6IBS0 349 aaKnown RBP22.54■■□□□ 1.2
CHD3-204ENST00000439235 USP37Q86T82 979 aa22.54■■□□□ 1.2
CHD3-204ENST00000439235 CBWD2Q8IUF1 395 aa22.54■■□□□ 1.2
CHD3-204ENST00000439235 RDH13Q8NBN7 331 aa22.54■■□□□ 1.2
CHD3-204ENST00000439235 TUBGCP2Q9BSJ2 902 aa22.54■■□□□ 1.2
CHD3-204ENST00000439235 IFIH1Q9BYX4 1025 aaKnown RBP22.54■■□□□ 1.2
CHD3-204ENST00000439235 CENPFP49454 3210 aa22.54■■□□□ 1.2
CHD3-204ENST00000439235 TNRC18O15417 2968 aaPredicted RBP22.53■■□□□ 1.2
CHD3-204ENST00000439235 CBFA2T2O43439 604 aa22.53■■□□□ 1.2
CHD3-204ENST00000439235 FAM189A1O60320 539 aa22.53■■□□□ 1.2
CHD3-204ENST00000439235 COPB1P53618 953 aaKnown RBP22.53■■□□□ 1.2
CHD3-204ENST00000439235 POU5F1Q01860 360 aaKnown RBP22.53■■□□□ 1.2
CHD3-204ENST00000439235 BFSP1Q12934 665 aa22.53■■□□□ 1.2
CHD3-204ENST00000439235 MAN2A1Q16706 1144 aa22.53■■□□□ 1.2
CHD3-204ENST00000439235 TRIM59Q8IWR1 403 aa22.53■■□□□ 1.2
CHD3-204ENST00000439235 THNSL1Q8IYQ7 743 aa22.53■■□□□ 1.2
CHD3-204ENST00000439235 PRDM5Q9NQX1 630 aaPredicted RBP22.53■■□□□ 1.2
CHD3-204ENST00000439235 TAB2Q9NYJ8 693 aa22.53■■□□□ 1.2
CHD3-204ENST00000439235 RBAKQ9NYW8 714 aaPredicted RBP22.53■■□□□ 1.2
CHD3-204ENST00000439235 UTP18Q9Y5J1 556 aaKnown RBP eCLIP22.53■■□□□ 1.2
CHD3-204ENST00000439235 TANC1Q9C0D5 1861 aa22.53■■□□□ 1.2
CHD3-204ENST00000439235 UMODL1Q5DID0 1318 aa22.53■■□□□ 1.2
CHD3-204ENST00000439235 LRRC10BA6NIK2 292 aa22.52■■□□□ 1.2
CHD3-204ENST00000439235 KIAA0355O15063 1070 aa22.52■■□□□ 1.2
CHD3-204ENST00000439235 TPM3P06753 285 aa22.52■■□□□ 1.2
CHD3-204ENST00000439235 ADRB2P07550 413 aa22.52■■□□□ 1.2
CHD3-204ENST00000439235 CLTAP09496 248 aa22.52■■□□□ 1.2
CHD3-204ENST00000439235 PRKCSHP14314 528 aaPredicted RBP22.52■■□□□ 1.2
CHD3-204ENST00000439235 RFC2P35250 354 aa22.52■■□□□ 1.2
CHD3-204ENST00000439235 GRM5P41594 1212 aa22.52■■□□□ 1.2
CHD3-204ENST00000439235 ACOT2P49753 483 aa22.52■■□□□ 1.2
CHD3-204ENST00000439235 CYP24A1Q07973 514 aa22.52■■□□□ 1.2
CHD3-204ENST00000439235 BRSK2Q8IWQ3 736 aa22.52■■□□□ 1.2
CHD3-204ENST00000439235 ZSWIM2Q8NEG5 633 aa22.52■■□□□ 1.2
CHD3-204ENST00000439235 SEPT8Q92599 483 aa22.52■■□□□ 1.2
CHD3-204ENST00000439235 APBB2Q92870 758 aa22.52■■□□□ 1.2
CHD3-204ENST00000439235 BORCS6Q96GS4 357 aa22.52■■□□□ 1.2
CHD3-204ENST00000439235 MFSD14AQ96MC6 490 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms