RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 TBC1D22BQ9NU19 505 aa12.57□□□□□ -0.4
CSTF3-203ENST00000438862 PCDHA10Q9Y5I2 948 aa12.57□□□□□ -0.4
CSTF3-203ENST00000438862 ASPMQ8IZT6 3477 aa12.57□□□□□ -0.4
CSTF3-203ENST00000438862 MEIS3P2A8K0S8 358 aa12.56□□□□□ -0.4
CSTF3-203ENST00000438862 IPO5O00410 1097 aaKnown RBP12.56□□□□□ -0.4
CSTF3-203ENST00000438862 TGM5O43548 720 aa12.56□□□□□ -0.4
CSTF3-203ENST00000438862 GDF9O60383 454 aa12.56□□□□□ -0.4
CSTF3-203ENST00000438862 B4GALT3O60512 393 aa12.56□□□□□ -0.4
CSTF3-203ENST00000438862 MYBP10242 640 aa12.56□□□□□ -0.4
CSTF3-203ENST00000438862 TDGF1P13385 188 aa12.56□□□□□ -0.4
CSTF3-203ENST00000438862 PRSS12P56730 875 aa12.56□□□□□ -0.4
CSTF3-203ENST00000438862 DSG1Q02413 1049 aa12.56□□□□□ -0.4
CSTF3-203ENST00000438862 FZD5Q13467 585 aa12.56□□□□□ -0.4
CSTF3-203ENST00000438862 LILRA6Q6PI73 481 aa12.56□□□□□ -0.4
CSTF3-203ENST00000438862 PRR23BQ6ZRT6 265 aa12.56□□□□□ -0.4
CSTF3-203ENST00000438862 TPRG1Q6ZUI0 275 aa12.56□□□□□ -0.4
CSTF3-203ENST00000438862 TAS1R1Q7RTX1 841 aa12.56□□□□□ -0.4
CSTF3-203ENST00000438862 PALB2Q86YC2 1186 aa12.56□□□□□ -0.4
CSTF3-203ENST00000438862 ZNF654Q8IZM8 581 aa12.56□□□□□ -0.4
CSTF3-203ENST00000438862 SRBD1Q8N5C6 995 aaKnown RBP12.56□□□□□ -0.4
CSTF3-203ENST00000438862 NCOA7Q8NI08 942 aa12.56□□□□□ -0.4
CSTF3-203ENST00000438862 IGDCC4Q8TDY8 1250 aa12.56□□□□□ -0.4
CSTF3-203ENST00000438862 LNPKQ9C0E8 428 aa12.56□□□□□ -0.4
CSTF3-203ENST00000438862 RTN4Q9NQC3 1192 aaKnown RBP12.56□□□□□ -0.4
CSTF3-203ENST00000438862 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.56□□□□□ -0.4
CSTF3-203ENST00000438862 ZMIZ1Q9ULJ6 1067 aa12.56□□□□□ -0.4
CSTF3-203ENST00000438862 CNOT1A5YKK6 2376 aaKnown RBP12.56□□□□□ -0.4
CSTF3-203ENST00000438862 TM4SF5O14894 197 aa12.55□□□□□ -0.4
CSTF3-203ENST00000438862 CSDE1O75534 798 aaKnown RBP12.55□□□□□ -0.4
CSTF3-203ENST00000438862 ZMYND10O75800 440 aa12.55□□□□□ -0.4
CSTF3-203ENST00000438862 EFEMP2O95967 443 aa12.55□□□□□ -0.4
CSTF3-203ENST00000438862 CNR2P34972 360 aa12.55□□□□□ -0.4
CSTF3-203ENST00000438862 SIM2Q14190 667 aaPredicted RBP12.55□□□□□ -0.4
CSTF3-203ENST00000438862 MRPL10Q7Z7H8 261 aaKnown RBP12.55□□□□□ -0.4
CSTF3-203ENST00000438862 PLA2G4DQ86XP0 818 aa12.55□□□□□ -0.4
CSTF3-203ENST00000438862 RNF168Q8IYW5 571 aaPredicted RBP12.55□□□□□ -0.4
CSTF3-203ENST00000438862 KDF1Q8NAX2 398 aaPredicted RBP12.55□□□□□ -0.4
CSTF3-203ENST00000438862 PHF20Q9BVI0 1012 aa12.55□□□□□ -0.4
CSTF3-203ENST00000438862 RSAD1Q9HA92 442 aa12.55□□□□□ -0.4
CSTF3-203ENST00000438862 RIC8AQ9NPQ8 531 aa12.55□□□□□ -0.4
CSTF3-203ENST00000438862 CHST7Q9NS84 486 aa12.55□□□□□ -0.4
CSTF3-203ENST00000438862 FNIP2Q9P278 1114 aa12.55□□□□□ -0.4
CSTF3-203ENST00000438862 GABBR1Q9UBS5 961 aa12.55□□□□□ -0.4
CSTF3-203ENST00000438862 TCEAL9Q9UHQ7 104 aa12.55□□□□□ -0.4
CSTF3-203ENST00000438862 PIN4Q9Y237 131 aaKnown RBP12.55□□□□□ -0.4
CSTF3-203ENST00000438862 CNTNAP2Q9UHC6 1331 aa12.55□□□□□ -0.4
CSTF3-203ENST00000438862 COL4A3Q01955 1670 aa12.54□□□□□ -0.4
CSTF3-203ENST00000438862 MAN2B1O00754 1011 aa12.54□□□□□ -0.4
CSTF3-203ENST00000438862 PLEKHA8P1O95397 391 aa12.54□□□□□ -0.4
CSTF3-203ENST00000438862 SREBF1P36956 1147 aa12.54□□□□□ -0.4
CSTF3-203ENST00000438862 DNM2P50570 870 aa12.54□□□□□ -0.4
CSTF3-203ENST00000438862 CCR3P51677 355 aa12.54□□□□□ -0.4
CSTF3-203ENST00000438862 CREMQ03060 361 aa12.54□□□□□ -0.4
CSTF3-203ENST00000438862 UNQ6494/PRO21346Q6UXR6 183 aa12.54□□□□□ -0.4
CSTF3-203ENST00000438862 AGMOQ6ZNB7 445 aa12.54□□□□□ -0.4
CSTF3-203ENST00000438862 GRASPQ7Z6J2 395 aaPredicted RBP12.54□□□□□ -0.4
CSTF3-203ENST00000438862 TMTC2Q8N394 836 aa12.54□□□□□ -0.4
CSTF3-203ENST00000438862 FGF13Q92913 245 aa12.54□□□□□ -0.4
CSTF3-203ENST00000438862 ANO3Q9BYT9 981 aa12.54□□□□□ -0.4
CSTF3-203ENST00000438862 CHRDQ9H2X0 955 aa12.54□□□□□ -0.4
CSTF3-203ENST00000438862 PCDHB2Q9Y5E7 798 aa12.54□□□□□ -0.4
CSTF3-203ENST00000438862 WDR81Q562E7 1941 aa12.53□□□□□ -0.4
CSTF3-203ENST00000438862 NR1I2O75469 434 aa12.53□□□□□ -0.4
CSTF3-203ENST00000438862 OATP04181 439 aa12.53□□□□□ -0.4
CSTF3-203ENST00000438862 HNRNPA1P09651 372 aaKnown RBP eCLIP12.53□□□□□ -0.4
CSTF3-203ENST00000438862 CALM1P0DP23 149 aa12.53□□□□□ -0.4
CSTF3-203ENST00000438862 CALM2P0DP24 149 aa12.53□□□□□ -0.4
CSTF3-203ENST00000438862 CALM3P0DP25 149 aa12.53□□□□□ -0.4
CSTF3-203ENST00000438862 OR1G1P47890 313 aa12.53□□□□□ -0.4
CSTF3-203ENST00000438862 AP3B2Q13367 1082 aa12.53□□□□□ -0.4
CSTF3-203ENST00000438862 CATSPER4Q7RTX7 472 aa12.53□□□□□ -0.4
CSTF3-203ENST00000438862 HEATR3Q7Z4Q2 680 aa12.53□□□□□ -0.4
CSTF3-203ENST00000438862 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.53□□□□□ -0.4
CSTF3-203ENST00000438862 ZNF410Q86VK4 478 aa12.53□□□□□ -0.4
CSTF3-203ENST00000438862 PLEKHM2Q8IWE5 1019 aa12.53□□□□□ -0.4
CSTF3-203ENST00000438862 CMTR1Q8N1G2 835 aaKnown RBP12.53□□□□□ -0.4
CSTF3-203ENST00000438862 MBOAT7Q96N66 472 aa12.53□□□□□ -0.4
CSTF3-203ENST00000438862 ZNF577Q9BSK1 485 aa12.53□□□□□ -0.4
CSTF3-203ENST00000438862 MTA3Q9BTC8 594 aa12.53□□□□□ -0.4
CSTF3-203ENST00000438862 GLT8D2Q9H1C3 349 aa12.53□□□□□ -0.4
CSTF3-203ENST00000438862 UBN1Q9NPG3 1134 aa12.53□□□□□ -0.4
CSTF3-203ENST00000438862 MARCH5Q9NX47 278 aa12.53□□□□□ -0.4
CSTF3-203ENST00000438862 SAMM50Q9Y512 469 aa12.53□□□□□ -0.4
CSTF3-203ENST00000438862 FRYQ5TBA9 3013 aa12.53□□□□□ -0.4
CSTF3-203ENST00000438862 DOCK6Q96HP0 2047 aa12.52□□□□□ -0.4
CSTF3-203ENST00000438862 A0A087WZ62 844 aa12.52□□□□□ -0.41
CSTF3-203ENST00000438862 TMEM8BA6NDV4 472 aa12.52□□□□□ -0.41
CSTF3-203ENST00000438862 E7EWF7 191 aa12.52□□□□□ -0.41
CSTF3-203ENST00000438862 FAM86B1E9PN63 330 aa12.52□□□□□ -0.41
CSTF3-203ENST00000438862 POMCP01189 267 aa12.52□□□□□ -0.41
CSTF3-203ENST00000438862 CYP21A2P08686 494 aa12.52□□□□□ -0.41
CSTF3-203ENST00000438862 FAM86B2P0C5J1 330 aa12.52□□□□□ -0.41
CSTF3-203ENST00000438862 AFF1P51825 1210 aaKnown RBP12.52□□□□□ -0.41
CSTF3-203ENST00000438862 USP41Q3LFD5 358 aa12.52□□□□□ -0.41
CSTF3-203ENST00000438862 AASDHQ4L235 1098 aaPredicted RBP12.52□□□□□ -0.41
CSTF3-203ENST00000438862 LRSAM1Q6UWE0 723 aa12.52□□□□□ -0.41
CSTF3-203ENST00000438862 COLGALT2Q8IYK4 626 aa12.52□□□□□ -0.41
CSTF3-203ENST00000438862 CNNM3Q8NE01 707 aa12.52□□□□□ -0.41
CSTF3-203ENST00000438862 PGBD1Q96JS3 809 aa12.52□□□□□ -0.41
CSTF3-203ENST00000438862 KXD1Q9BQD3 176 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 188.3 ms