RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 DUSP2Q05923 314 aa4.58□□□□□ -1.68
HMGB3P12-201ENST00000438745 STAT4Q14765 748 aa4.58□□□□□ -1.68
HMGB3P12-201ENST00000438745 CSRP2Q16527 193 aa4.58□□□□□ -1.68
HMGB3P12-201ENST00000438745 FAM214AQ32MH5 1076 aa4.58□□□□□ -1.68
HMGB3P12-201ENST00000438745 CT47A1Q5JQC4 288 aaPredicted RBP4.58□□□□□ -1.68
HMGB3P12-201ENST00000438745 HDGFL2Q7Z4V5 671 aaPredicted RBP4.58□□□□□ -1.68
HMGB3P12-201ENST00000438745 ULK2Q8IYT8 1036 aa4.58□□□□□ -1.68
HMGB3P12-201ENST00000438745 OR52N2Q8NGI0 321 aa4.58□□□□□ -1.68
HMGB3P12-201ENST00000438745 IL17RAQ96F46 866 aa4.58□□□□□ -1.68
HMGB3P12-201ENST00000438745 MRIQ9BWK5 157 aa4.58□□□□□ -1.68
HMGB3P12-201ENST00000438745 GPRC5BQ9NZH0 403 aa4.58□□□□□ -1.68
HMGB3P12-201ENST00000438745 SCOCQ9UIL1 159 aa4.58□□□□□ -1.68
HMGB3P12-201ENST00000438745 ING1Q9UK53 422 aaPredicted RBP4.58□□□□□ -1.68
HMGB3P12-201ENST00000438745 RPTORQ8N122 1335 aa4.57□□□□□ -1.68
HMGB3P12-201ENST00000438745 ABHD18Q0P651 414 aa4.57□□□□□ -1.68
HMGB3P12-201ENST00000438745 LHFPL2Q6ZUX7 228 aa4.57□□□□□ -1.68
HMGB3P12-201ENST00000438745 RHOUQ7L0Q8 258 aa4.57□□□□□ -1.68
HMGB3P12-201ENST00000438745 GLB1L3Q8NCI6 653 aaPredicted RBP4.57□□□□□ -1.68
HMGB3P12-201ENST00000438745 GPATCH3Q96I76 525 aa4.57□□□□□ -1.68
HMGB3P12-201ENST00000438745 FAM126AQ9BYI3 521 aaPredicted RBP4.57□□□□□ -1.68
HMGB3P12-201ENST00000438745 MMRN2Q9H8L6 949 aa4.57□□□□□ -1.68
HMGB3P12-201ENST00000438745 ZMYM3Q14202 1370 aa4.56□□□□□ -1.68
HMGB3P12-201ENST00000438745 GOLGA8AA7E2F4 631 aa4.56□□□□□ -1.68
HMGB3P12-201ENST00000438745 GPR39O43194 453 aa4.56□□□□□ -1.68
HMGB3P12-201ENST00000438745 CPEP16870 476 aa4.56□□□□□ -1.68
HMGB3P12-201ENST00000438745 MAKP20794 623 aa4.56□□□□□ -1.68
HMGB3P12-201ENST00000438745 NR4A1P22736 598 aa4.56□□□□□ -1.68
HMGB3P12-201ENST00000438745 CRHR1P34998 444 aa4.56□□□□□ -1.68
HMGB3P12-201ENST00000438745 GPR3P46089 330 aa4.56□□□□□ -1.68
HMGB3P12-201ENST00000438745 HMGA2P52926 109 aa4.56□□□□□ -1.68
HMGB3P12-201ENST00000438745 PURAQ00577 322 aaKnown RBP4.56□□□□□ -1.68
HMGB3P12-201ENST00000438745 APBA1Q02410 837 aa4.56□□□□□ -1.68
HMGB3P12-201ENST00000438745 DPTQ07507 201 aa4.56□□□□□ -1.68
HMGB3P12-201ENST00000438745 VPS72Q15906 364 aa4.56□□□□□ -1.68
HMGB3P12-201ENST00000438745 PTPROQ16827 1216 aa4.56□□□□□ -1.68
HMGB3P12-201ENST00000438745 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.56□□□□□ -1.68
HMGB3P12-201ENST00000438745 ANO4Q32M45 955 aa4.56□□□□□ -1.68
HMGB3P12-201ENST00000438745 DRICH1Q6PGQ1 229 aaPredicted RBP4.56□□□□□ -1.68
HMGB3P12-201ENST00000438745 Q6ZPA2 131 aa4.56□□□□□ -1.68
HMGB3P12-201ENST00000438745 ZNF483Q8TF39 744 aaPredicted RBP4.56□□□□□ -1.68
HMGB3P12-201ENST00000438745 TSPEARQ8WU66 669 aa4.56□□□□□ -1.68
HMGB3P12-201ENST00000438745 LARP4BQ92615 738 aaKnown RBP4.56□□□□□ -1.68
HMGB3P12-201ENST00000438745 CPPED1Q9BRF8 314 aaPredicted RBP4.56□□□□□ -1.68
HMGB3P12-201ENST00000438745 CPEB1Q9BZB8 566 aaKnown RBP4.56□□□□□ -1.68
HMGB3P12-201ENST00000438745 SLC2A4RGQ9NR83 387 aa4.56□□□□□ -1.68
HMGB3P12-201ENST00000438745 GPRC5DQ9NZD1 345 aa4.56□□□□□ -1.68
HMGB3P12-201ENST00000438745 DPP7Q9UHL4 492 aa4.56□□□□□ -1.68
HMGB3P12-201ENST00000438745 TOP2BQ02880 1626 aa4.56□□□□□ -1.68
HMGB3P12-201ENST00000438745 TBKBP1A7MCY6 615 aa4.55□□□□□ -1.68
HMGB3P12-201ENST00000438745 PHF2O75151 1096 aa4.55□□□□□ -1.68
HMGB3P12-201ENST00000438745 ITGA10O75578 1167 aa4.55□□□□□ -1.68
HMGB3P12-201ENST00000438745 NCLP19338 710 aaKnown RBP4.55□□□□□ -1.68
HMGB3P12-201ENST00000438745 HK1P19367 917 aa4.55□□□□□ -1.68
HMGB3P12-201ENST00000438745 PTTG1IPP53801 180 aa4.55□□□□□ -1.68
HMGB3P12-201ENST00000438745 ERVK-21P61565 698 aa4.55□□□□□ -1.68
HMGB3P12-201ENST00000438745 FHL2Q14192 279 aa4.55□□□□□ -1.68
HMGB3P12-201ENST00000438745 ADRM1Q16186 407 aa4.55□□□□□ -1.68
HMGB3P12-201ENST00000438745 MUM1Q2TAK8 710 aa4.55□□□□□ -1.68
HMGB3P12-201ENST00000438745 RNF219Q5W0B1 726 aaPredicted RBP4.55□□□□□ -1.68
HMGB3P12-201ENST00000438745 IQSEC1Q6DN90 963 aa4.55□□□□□ -1.68
HMGB3P12-201ENST00000438745 BTNL9Q6UXG8 535 aa4.55□□□□□ -1.68
HMGB3P12-201ENST00000438745 MRGPREQ86SM8 312 aa4.55□□□□□ -1.68
HMGB3P12-201ENST00000438745 MB21D1Q8N884 522 aa4.55□□□□□ -1.68
HMGB3P12-201ENST00000438745 GPR156Q8NFN8 814 aa4.55□□□□□ -1.68
HMGB3P12-201ENST00000438745 WDR66Q8TBY9 1149 aa4.55□□□□□ -1.68
HMGB3P12-201ENST00000438745 FATE1Q969F0 183 aa4.55□□□□□ -1.68
HMGB3P12-201ENST00000438745 LENG9Q96B70 501 aa4.55□□□□□ -1.68
HMGB3P12-201ENST00000438745 CLCA2Q9UQC9 943 aa4.55□□□□□ -1.68
HMGB3P12-201ENST00000438745 COL4A3BPQ9Y5P4 624 aa4.55□□□□□ -1.68
HMGB3P12-201ENST00000438745 SNAPC4Q5SXM2 1469 aa4.55□□□□□ -1.68
HMGB3P12-201ENST00000438745 PEG3Q9GZU2 1588 aa4.54□□□□□ -1.68
HMGB3P12-201ENST00000438745 AHRRA9YTQ3 701 aa4.54□□□□□ -1.68
HMGB3P12-201ENST00000438745 OVOL3O00110 214 aa4.54□□□□□ -1.68
HMGB3P12-201ENST00000438745 TRIM24O15164 1050 aa4.54□□□□□ -1.68
HMGB3P12-201ENST00000438745 PRKD3O94806 890 aa4.54□□□□□ -1.68
HMGB3P12-201ENST00000438745 MTHFD2P13995 350 aa4.54□□□□□ -1.68
HMGB3P12-201ENST00000438745 KRT4P19013 534 aa4.54□□□□□ -1.68
HMGB3P12-201ENST00000438745 IBSPP21815 317 aaPredicted RBP4.54□□□□□ -1.68
HMGB3P12-201ENST00000438745 SCAND1P57086 179 aa4.54□□□□□ -1.68
HMGB3P12-201ENST00000438745 EVA1CP58658 441 aa4.54□□□□□ -1.68
HMGB3P12-201ENST00000438745 TGFB2P61812 414 aa4.54□□□□□ -1.68
HMGB3P12-201ENST00000438745 AMPD3Q01432 767 aa4.54□□□□□ -1.68
HMGB3P12-201ENST00000438745 BMT2Q1RMZ1 405 aa4.54□□□□□ -1.68
HMGB3P12-201ENST00000438745 MST1LQ2TV78 715 aa4.54□□□□□ -1.68
HMGB3P12-201ENST00000438745 FAM47AQ5JRC9 791 aa4.54□□□□□ -1.68
HMGB3P12-201ENST00000438745 ANKS6Q68DC2 871 aa4.54□□□□□ -1.68
HMGB3P12-201ENST00000438745 Q6ZVL8 140 aa4.54□□□□□ -1.68
HMGB3P12-201ENST00000438745 ZNF627Q7L945 461 aa4.54□□□□□ -1.68
HMGB3P12-201ENST00000438745 SPATS2Q86XZ4 545 aaKnown RBP4.54□□□□□ -1.68
HMGB3P12-201ENST00000438745 XYLT1Q86Y38 959 aa4.54□□□□□ -1.68
HMGB3P12-201ENST00000438745 SLC25A43Q8WUT9 341 aaPredicted RBP4.54□□□□□ -1.68
HMGB3P12-201ENST00000438745 AUTS2Q8WXX7 1259 aa4.54□□□□□ -1.68
HMGB3P12-201ENST00000438745 RIN2Q8WYP3 895 aaPredicted RBP4.54□□□□□ -1.68
HMGB3P12-201ENST00000438745 HAS1Q92839 578 aa4.54□□□□□ -1.68
HMGB3P12-201ENST00000438745 PGBD4Q96DM1 585 aa4.54□□□□□ -1.68
HMGB3P12-201ENST00000438745 NDC1Q9BTX1 674 aa4.54□□□□□ -1.68
HMGB3P12-201ENST00000438745 TRIM8Q9BZR9 551 aa4.54□□□□□ -1.68
HMGB3P12-201ENST00000438745 KCNH6Q9H252 994 aa4.54□□□□□ -1.68
HMGB3P12-201ENST00000438745 IFT122Q9HBG6 1241 aa4.54□□□□□ -1.68
HMGB3P12-201ENST00000438745 PCDH12Q9NPG4 1184 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms