RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 IFT81Q8WYA0 676 aa15□□□□□ -0.01
PTCHD3-201ENST00000438700 STK33Q9BYT3 514 aa15□□□□□ -0.01
PTCHD3-201ENST00000438700 GPR88Q9GZN0 384 aa15□□□□□ -0.01
PTCHD3-201ENST00000438700 EPB41L5Q9HCM4 733 aa15□□□□□ -0.01
PTCHD3-201ENST00000438700 FARP2O94887 1054 aaPredicted RBP15□□□□□ -0.01
PTCHD3-201ENST00000438700 MAPTP10636 758 aaKnown RBP15□□□□□ -0.01
PTCHD3-201ENST00000438700 CARSP49589 748 aaKnown RBP15□□□□□ -0.01
PTCHD3-201ENST00000438700 GALCP54803 685 aa15□□□□□ -0.01
PTCHD3-201ENST00000438700 SOX10P56693 466 aa15□□□□□ -0.01
PTCHD3-201ENST00000438700 PPP2R5AQ15172 486 aa15□□□□□ -0.01
PTCHD3-201ENST00000438700 TTMPQ5BVD1 217 aa15□□□□□ -0.01
PTCHD3-201ENST00000438700 PHLDB3Q6NSJ2 640 aa15□□□□□ -0.01
PTCHD3-201ENST00000438700 KCNV1Q6PIU1 500 aa15□□□□□ -0.01
PTCHD3-201ENST00000438700 GPRC5AQ8NFJ5 357 aa15□□□□□ -0.01
PTCHD3-201ENST00000438700 MPHOSPH6Q99547 160 aaKnown RBP15□□□□□ -0.01
PTCHD3-201ENST00000438700 OSGEPQ9NPF4 335 aa15□□□□□ -0.01
PTCHD3-201ENST00000438700 ZNF302Q9NR11 478 aa15□□□□□ -0.01
PTCHD3-201ENST00000438700 NENFQ9UMX5 172 aa15□□□□□ -0.01
PTCHD3-201ENST00000438700 EMSYQ7Z589 1322 aa14.99□□□□□ -0.01
PTCHD3-201ENST00000438700 EBAG9O00559 213 aa14.99□□□□□ -0.01
PTCHD3-201ENST00000438700 SLC16A4O15374 487 aa14.99□□□□□ -0.01
PTCHD3-201ENST00000438700 CEP104O60308 925 aa14.99□□□□□ -0.01
PTCHD3-201ENST00000438700 ATG7O95352 703 aa14.99□□□□□ -0.01
PTCHD3-201ENST00000438700 ATP1A2P50993 1020 aa14.99□□□□□ -0.01
PTCHD3-201ENST00000438700 EPHB4P54760 987 aa14.99□□□□□ -0.01
PTCHD3-201ENST00000438700 TRADDQ15628 312 aa14.99□□□□□ -0.01
PTCHD3-201ENST00000438700 IFI16Q16666 785 aaKnown RBP14.99□□□□□ -0.01
PTCHD3-201ENST00000438700 LY6KQ17RY6 165 aa14.99□□□□□ -0.01
PTCHD3-201ENST00000438700 MMS22LQ6ZRQ5 1243 aa14.99□□□□□ -0.01
PTCHD3-201ENST00000438700 PEX26Q7Z412 305 aa14.99□□□□□ -0.01
PTCHD3-201ENST00000438700 DAAM2Q86T65 1068 aa14.99□□□□□ -0.01
PTCHD3-201ENST00000438700 USP38Q8NB14 1042 aa14.99□□□□□ -0.01
PTCHD3-201ENST00000438700 SHCBP1Q8NEM2 672 aa14.99□□□□□ -0.01
PTCHD3-201ENST00000438700 OLIG1Q8TAK6 271 aa14.99□□□□□ -0.01
PTCHD3-201ENST00000438700 GTF3C2Q8WUA4 911 aaPredicted RBP14.99□□□□□ -0.01
PTCHD3-201ENST00000438700 NMRK2Q9NPI5 230 aa14.99□□□□□ -0.01
PTCHD3-201ENST00000438700 NFU1Q9UMS0 254 aa14.99□□□□□ -0.01
PTCHD3-201ENST00000438700 GGPS1O95749 300 aa14.99□□□□□ -0.01
PTCHD3-201ENST00000438700 KRT13P13646 458 aa14.99□□□□□ -0.01
PTCHD3-201ENST00000438700 GCLMP48507 274 aa14.99□□□□□ -0.01
PTCHD3-201ENST00000438700 PDCLQ13371 301 aa14.99□□□□□ -0.01
PTCHD3-201ENST00000438700 ALCAMQ13740 583 aa14.99□□□□□ -0.01
PTCHD3-201ENST00000438700 HAUS6Q7Z4H7 955 aa14.99□□□□□ -0.01
PTCHD3-201ENST00000438700 PALB2Q86YC2 1186 aa14.99□□□□□ -0.01
PTCHD3-201ENST00000438700 CYP26B1Q9NR63 512 aa14.99□□□□□ -0.01
PTCHD3-201ENST00000438700 SLC45A1Q9Y2W3 748 aa14.99□□□□□ -0.01
PTCHD3-201ENST00000438700 PLXNB2O15031 1838 aa14.99□□□□□ -0.01
PTCHD3-201ENST00000438700 ARIH2O95376 493 aa14.98□□□□□ -0.01
PTCHD3-201ENST00000438700 ATP4AP20648 1035 aa14.98□□□□□ -0.01
PTCHD3-201ENST00000438700 PPP3CAQ08209 521 aa14.98□□□□□ -0.01
PTCHD3-201ENST00000438700 NEDD9Q14511 834 aa14.98□□□□□ -0.01
PTCHD3-201ENST00000438700 XKR3Q5GH77 459 aa14.98□□□□□ -0.01
PTCHD3-201ENST00000438700 SPRYD7Q5W111 196 aa14.98□□□□□ -0.01
PTCHD3-201ENST00000438700 SLC9A9Q8IVB4 645 aa14.98□□□□□ -0.01
PTCHD3-201ENST00000438700 RUBCNQ92622 972 aa14.98□□□□□ -0.01
PTCHD3-201ENST00000438700 KIFC3Q9BVG8 833 aa14.98□□□□□ -0.01
PTCHD3-201ENST00000438700 AP1M1Q9BXS5 423 aa14.98□□□□□ -0.01
PTCHD3-201ENST00000438700 TAS2R14Q9NYV8 317 aa14.98□□□□□ -0.01
PTCHD3-201ENST00000438700 MAFBQ9Y5Q3 323 aaPredicted RBP14.98□□□□□ -0.01
PTCHD3-201ENST00000438700 GSTTP1A0A1W2PQM5 241 aa14.98□□□□□ -0.01
PTCHD3-201ENST00000438700 GOLGA8IPA6NC78 632 aa14.98□□□□□ -0.01
PTCHD3-201ENST00000438700 GOLGA8JA6NMD2 632 aa14.98□□□□□ -0.01
PTCHD3-201ENST00000438700 CCDC169A6NNP5 214 aa14.98□□□□□ -0.01
PTCHD3-201ENST00000438700 FOXN3O00409 490 aaPredicted RBP14.98□□□□□ -0.01
PTCHD3-201ENST00000438700 EIF3HO15372 352 aaKnown RBP eCLIP14.98□□□□□ -0.01
PTCHD3-201ENST00000438700 RAD51CO43502 376 aa14.98□□□□□ -0.01
PTCHD3-201ENST00000438700 KRT14P02533 472 aa14.98□□□□□ -0.01
PTCHD3-201ENST00000438700 FAM153BP0C7A2 387 aa14.98□□□□□ -0.01
PTCHD3-201ENST00000438700 TGFB3P10600 412 aa14.98□□□□□ -0.01
PTCHD3-201ENST00000438700 HNRNPH1P31943 449 aaKnown RBP14.98□□□□□ -0.01
PTCHD3-201ENST00000438700 PPFIA1Q13136 1202 aa14.98□□□□□ -0.01
PTCHD3-201ENST00000438700 FAM153CQ494X1 144 aa14.98□□□□□ -0.01
PTCHD3-201ENST00000438700 MTERF2Q49AM1 385 aa14.98□□□□□ -0.01
PTCHD3-201ENST00000438700 GLE1Q53GS7 698 aaKnown RBP14.98□□□□□ -0.01
PTCHD3-201ENST00000438700 ANKRD23Q86SG2 305 aa14.98□□□□□ -0.01
PTCHD3-201ENST00000438700 FBXO16Q8IX29 292 aaPredicted RBP14.98□□□□□ -0.01
PTCHD3-201ENST00000438700 IFT20Q8IY31 132 aa14.98□□□□□ -0.01
PTCHD3-201ENST00000438700 METTL13Q8N6R0 699 aa14.98□□□□□ -0.01
PTCHD3-201ENST00000438700 SLC30A5Q8TAD4 765 aa14.98□□□□□ -0.01
PTCHD3-201ENST00000438700 BSNDQ8WZ55 320 aa14.98□□□□□ -0.01
PTCHD3-201ENST00000438700 ACCSQ96QU6 501 aa14.98□□□□□ -0.01
PTCHD3-201ENST00000438700 FAM153AQ9UHL3 310 aa14.98□□□□□ -0.01
PTCHD3-201ENST00000438700 PLXNA1Q9UIW2 1896 aa14.97□□□□□ -0.01
PTCHD3-201ENST00000438700 DGAT1O75907 488 aa14.97□□□□□ -0.01
PTCHD3-201ENST00000438700 OATP04181 439 aa14.97□□□□□ -0.01
PTCHD3-201ENST00000438700 ANXA13P27216 316 aa14.97□□□□□ -0.01
PTCHD3-201ENST00000438700 NPTX2P47972 431 aa14.97□□□□□ -0.01
PTCHD3-201ENST00000438700 VAMP7P51809 220 aa14.97□□□□□ -0.01
PTCHD3-201ENST00000438700 NCKAP1LP55160 1127 aa14.97□□□□□ -0.01
PTCHD3-201ENST00000438700 CCNA1P78396 465 aa14.97□□□□□ -0.01
PTCHD3-201ENST00000438700 DMP1Q13316 513 aaPredicted RBP14.97□□□□□ -0.01
PTCHD3-201ENST00000438700 METTL7BQ6UX53 244 aa14.97□□□□□ -0.01
PTCHD3-201ENST00000438700 LMO3Q8TAP4 145 aa14.97□□□□□ -0.01
PTCHD3-201ENST00000438700 TMEM206Q9H813 350 aa14.97□□□□□ -0.01
PTCHD3-201ENST00000438700 YY1AP1Q9H869 796 aa14.97□□□□□ -0.01
PTCHD3-201ENST00000438700 UBE2TQ9NPD8 197 aaPredicted RBP14.97□□□□□ -0.01
PTCHD3-201ENST00000438700 XPNPEP1Q9NQW7 623 aa14.97□□□□□ -0.01
PTCHD3-201ENST00000438700 HSPBP1Q9NZL4 362 aa14.97□□□□□ -0.01
PTCHD3-201ENST00000438700 IGKV6D-21A0A0A0MT36 114 aa14.97□□□□□ -0.01
PTCHD3-201ENST00000438700 GUCY2FP51841 1108 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms