RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 MSTO1Q9BUK6 570 aa7.13□□□□□ -1.27
CSDE1-205ENST00000438362 TRIM55Q9BYV6 548 aa7.13□□□□□ -1.27
CSDE1-205ENST00000438362 CXorf56Q9H5V9 222 aa7.13□□□□□ -1.27
CSDE1-205ENST00000438362 GINS2Q9Y248 185 aa7.13□□□□□ -1.27
CSDE1-205ENST00000438362 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.13□□□□□ -1.27
CSDE1-205ENST00000438362 MRC1P22897 1456 aa7.13□□□□□ -1.27
CSDE1-205ENST00000438362 RGPD8O14715 1765 aaPredicted RBP7.13□□□□□ -1.27
CSDE1-205ENST00000438362 TMEM120BA0PK00 339 aa7.12□□□□□ -1.27
CSDE1-205ENST00000438362 F8VZ95 297 aa7.12□□□□□ -1.27
CSDE1-205ENST00000438362 ECE2O60344 883 aa7.12□□□□□ -1.27
CSDE1-205ENST00000438362 CAND2O75155 1236 aa7.12□□□□□ -1.27
CSDE1-205ENST00000438362 SFNP31947 248 aa7.12□□□□□ -1.27
CSDE1-205ENST00000438362 COILP38432 576 aaPredicted RBP7.12□□□□□ -1.27
CSDE1-205ENST00000438362 GPS1Q13098 491 aa7.12□□□□□ -1.27
CSDE1-205ENST00000438362 RCN2Q14257 317 aa7.12□□□□□ -1.27
CSDE1-205ENST00000438362 TRIM72Q6ZMU5 477 aa7.12□□□□□ -1.27
CSDE1-205ENST00000438362 SLC13A5Q86YT5 568 aaPredicted RBP7.12□□□□□ -1.27
CSDE1-205ENST00000438362 EIF1ADQ8N9N8 165 aaKnown RBP7.12□□□□□ -1.27
CSDE1-205ENST00000438362 ZSWIM1Q9BR11 485 aa7.12□□□□□ -1.27
CSDE1-205ENST00000438362 TRIM6Q9C030 488 aaPredicted RBP7.12□□□□□ -1.27
CSDE1-205ENST00000438362 GINM1Q9NU53 330 aa7.12□□□□□ -1.27
CSDE1-205ENST00000438362 FGFR1OP2Q9NVK5 253 aa7.12□□□□□ -1.27
CSDE1-205ENST00000438362 NXF1Q9UBU9 619 aaKnown RBP7.12□□□□□ -1.27
CSDE1-205ENST00000438362 IQANK1A0A1B0GTG1 560 aa7.12□□□□□ -1.27
CSDE1-205ENST00000438362 H0Y3Z8 333 aa7.12□□□□□ -1.27
CSDE1-205ENST00000438362 ATMINO43313 823 aaPredicted RBP7.12□□□□□ -1.27
CSDE1-205ENST00000438362 SKIP12755 728 aa7.12□□□□□ -1.27
CSDE1-205ENST00000438362 ELF1P32519 619 aa7.12□□□□□ -1.27
CSDE1-205ENST00000438362 PSMC6P62333 389 aa7.12□□□□□ -1.27
CSDE1-205ENST00000438362 ZNF844Q08AG5 666 aa7.12□□□□□ -1.27
CSDE1-205ENST00000438362 KCNMA1Q12791 1236 aa7.12□□□□□ -1.27
CSDE1-205ENST00000438362 KYNUQ16719 465 aa7.12□□□□□ -1.27
CSDE1-205ENST00000438362 COBLL1Q53SF7 1204 aa7.12□□□□□ -1.27
CSDE1-205ENST00000438362 DARS2Q6PI48 645 aaKnown RBP7.12□□□□□ -1.27
CSDE1-205ENST00000438362 LRRC34Q8IZ02 419 aa7.12□□□□□ -1.27
CSDE1-205ENST00000438362 KCTD6Q8NC69 237 aa7.12□□□□□ -1.27
CSDE1-205ENST00000438362 C9orf72Q96LT7 481 aa7.12□□□□□ -1.27
CSDE1-205ENST00000438362 MMTAG2Q9BU76 263 aaKnown RBP7.12□□□□□ -1.27
CSDE1-205ENST00000438362 SPATS2LQ9NUQ6 558 aaKnown RBP7.12□□□□□ -1.27
CSDE1-205ENST00000438362 FAM53CQ9NYF3 392 aa7.12□□□□□ -1.27
CSDE1-205ENST00000438362 CHORDC1Q9UHD1 332 aaPredicted RBP7.12□□□□□ -1.27
CSDE1-205ENST00000438362 TRPC5Q9UL62 973 aaPredicted RBP7.12□□□□□ -1.27
CSDE1-205ENST00000438362 A0A0G2JND7 137 aa7.12□□□□□ -1.27
CSDE1-205ENST00000438362 CALB1P05937 261 aa7.12□□□□□ -1.27
CSDE1-205ENST00000438362 SREBF1P36956 1147 aa7.12□□□□□ -1.27
CSDE1-205ENST00000438362 FNTAP49354 379 aa7.12□□□□□ -1.27
CSDE1-205ENST00000438362 MKRN4PQ13434 485 aaPredicted RBP7.12□□□□□ -1.27
CSDE1-205ENST00000438362 ZNF394Q53GI3 561 aa7.12□□□□□ -1.27
CSDE1-205ENST00000438362 HP1BP3Q5SSJ5 553 aaPredicted RBP7.12□□□□□ -1.27
CSDE1-205ENST00000438362 FAM160B1Q5W0V3 765 aa7.12□□□□□ -1.27
CSDE1-205ENST00000438362 CYFIP1Q7L576 1253 aa7.12□□□□□ -1.27
CSDE1-205ENST00000438362 SPATA24Q86W54 205 aa7.12□□□□□ -1.27
CSDE1-205ENST00000438362 PRPF38AQ8NAV1 312 aaKnown RBP7.12□□□□□ -1.27
CSDE1-205ENST00000438362 TTC13Q8NBP0 860 aa7.12□□□□□ -1.27
CSDE1-205ENST00000438362 C18orf8Q96DM3 657 aa7.12□□□□□ -1.27
CSDE1-205ENST00000438362 ANKRD36BP1Q96IX9 119 aa7.12□□□□□ -1.27
CSDE1-205ENST00000438362 RPS6KC1Q96S38 1066 aa7.12□□□□□ -1.27
CSDE1-205ENST00000438362 ATP6V0A4Q9HBG4 840 aa7.12□□□□□ -1.27
CSDE1-205ENST00000438362 CD248Q9HCU0 757 aa7.12□□□□□ -1.27
CSDE1-205ENST00000438362 SENP1Q9P0U3 644 aa7.12□□□□□ -1.27
CSDE1-205ENST00000438362 HESX1Q9UBX0 185 aa7.12□□□□□ -1.27
CSDE1-205ENST00000438362 GTF3C4Q9UKN8 822 aa7.12□□□□□ -1.27
CSDE1-205ENST00000438362 AFDNP55196 1824 aaKnown RBP7.12□□□□□ -1.27
CSDE1-205ENST00000438362 SPATA31A5Q5VU36 1347 aa7.12□□□□□ -1.27
CSDE1-205ENST00000438362 SPATA31A7Q8IWB4 1347 aa7.12□□□□□ -1.27
CSDE1-205ENST00000438362 LOC102724159A0A0B4J2E5 919 aa7.12□□□□□ -1.27
CSDE1-205ENST00000438362 DDX3XO00571 662 aaKnown RBP eCLIP7.12□□□□□ -1.276e-7■■■□□ 18.6
CSDE1-205ENST00000438362 MED7O43513 233 aa7.12□□□□□ -1.27
CSDE1-205ENST00000438362 SMIM24O75264 130 aa7.12□□□□□ -1.27
CSDE1-205ENST00000438362 SPAG7O75391 227 aa7.12□□□□□ -1.27
CSDE1-205ENST00000438362 RARGP13631 454 aa7.12□□□□□ -1.27
CSDE1-205ENST00000438362 PSMA2P25787 234 aa7.12□□□□□ -1.27
CSDE1-205ENST00000438362 GNA15P30679 374 aa7.12□□□□□ -1.27
CSDE1-205ENST00000438362 YWHABP31946 246 aaKnown RBP7.12□□□□□ -1.27
CSDE1-205ENST00000438362 SCTRP47872 440 aa7.12□□□□□ -1.27
CSDE1-205ENST00000438362 YARSP54577 528 aaKnown RBP7.12□□□□□ -1.27
CSDE1-205ENST00000438362 PTENP60484 403 aa7.12□□□□□ -1.27
CSDE1-205ENST00000438362 IRX4P78413 519 aa7.12□□□□□ -1.27
CSDE1-205ENST00000438362 PWP2Q15269 919 aaKnown RBP7.12□□□□□ -1.27
CSDE1-205ENST00000438362 NPY5RQ15761 445 aa7.12□□□□□ -1.27
CSDE1-205ENST00000438362 SNRNP35Q16560 246 aaKnown RBP7.12□□□□□ -1.27
CSDE1-205ENST00000438362 TMC3Q7Z5M5 1100 aa7.12□□□□□ -1.27
CSDE1-205ENST00000438362 PCGF5Q86SE9 256 aa7.12□□□□□ -1.27
CSDE1-205ENST00000438362 CD302Q8IX05 232 aa7.12□□□□□ -1.27
CSDE1-205ENST00000438362 SEPT12Q8IYM1 358 aa7.12□□□□□ -1.27
CSDE1-205ENST00000438362 GPD1LQ8N335 351 aa7.12□□□□□ -1.27
CSDE1-205ENST00000438362 MREGQ8N565 214 aa7.12□□□□□ -1.27
CSDE1-205ENST00000438362 SLC35C1Q96A29 364 aa7.12□□□□□ -1.27
CSDE1-205ENST00000438362 DNAJC19Q96DA6 116 aa7.12□□□□□ -1.27
CSDE1-205ENST00000438362 RIT2Q99578 217 aa7.12□□□□□ -1.27
CSDE1-205ENST00000438362 TIPINQ9BVW5 301 aa7.12□□□□□ -1.27
CSDE1-205ENST00000438362 FAM129AQ9BZQ8 928 aa7.12□□□□□ -1.27
CSDE1-205ENST00000438362 RAVER2Q9HCJ3 691 aaKnown RBP7.12□□□□□ -1.27
CSDE1-205ENST00000438362 OLFML3Q9NRN5 406 aa7.12□□□□□ -1.27
CSDE1-205ENST00000438362 IP6K2Q9UHH9 426 aa7.12□□□□□ -1.27
CSDE1-205ENST00000438362 ZFP69BQ9UJL9 534 aa7.12□□□□□ -1.27
CSDE1-205ENST00000438362 GOLGA8MH3BSY2 632 aa7.11□□□□□ -1.27
CSDE1-205ENST00000438362 INO80B-WBP1J3KQ70 363 aa7.11□□□□□ -1.27
CSDE1-205ENST00000438362 ZNF263O14978 683 aa7.11□□□□□ -1.27
CSDE1-205ENST00000438362 TBXAS1P24557 533 aaPredicted RBP7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms