RNA–Protein interactions for RNA: ENST00000438055.5

TTC3-209, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-209ENST00000438055 ATRNL1Q5VV63 1379 aa17.97■□□□□ 0.47
TTC3-209ENST00000438055 TCRBV7S2A1N4TA0A589 114 aa17.97■□□□□ 0.47
TTC3-209ENST00000438055 ANKRD63C9JTQ0 380 aa17.97■□□□□ 0.47
TTC3-209ENST00000438055 H0YGN5 161 aa17.97■□□□□ 0.47
TTC3-209ENST00000438055 USP37Q86T82 979 aa17.97■□□□□ 0.47
TTC3-209ENST00000438055 PRELID2Q8N945 189 aa17.97■□□□□ 0.47
TTC3-209ENST00000438055 FNBP1Q96RU3 617 aa17.97■□□□□ 0.47
TTC3-209ENST00000438055 FAM213AQ9BRX8 229 aa17.97■□□□□ 0.47
TTC3-209ENST00000438055 NFS1Q9Y697 457 aa17.97■□□□□ 0.47
TTC3-209ENST00000438055 PASKQ96RG2 1323 aa17.97■□□□□ 0.47
TTC3-209ENST00000438055 ATP9AO75110 1047 aa17.97■□□□□ 0.47
TTC3-209ENST00000438055 RPL21P46778 160 aaKnown RBP17.97■□□□□ 0.47
TTC3-209ENST00000438055 RWDD2BP57060 319 aa17.97■□□□□ 0.47
TTC3-209ENST00000438055 AGBL2Q5U5Z8 902 aa17.97■□□□□ 0.47
TTC3-209ENST00000438055 MMS22LQ6ZRQ5 1243 aa17.97■□□□□ 0.47
TTC3-209ENST00000438055 KAT2BQ92831 832 aa17.97■□□□□ 0.47
TTC3-209ENST00000438055 AKT1S1Q96B36 256 aa17.97■□□□□ 0.47
TTC3-209ENST00000438055 AGO4Q9HCK5 861 aaKnown RBP17.97■□□□□ 0.47
TTC3-209ENST00000438055 KCNK9Q9NPC2 374 aa17.97■□□□□ 0.47
TTC3-209ENST00000438055 HGSO14964 777 aaPredicted RBP17.97■□□□□ 0.47
TTC3-209ENST00000438055 PSMC5P62195 406 aa17.97■□□□□ 0.47
TTC3-209ENST00000438055 ADCY1Q08828 1119 aa17.97■□□□□ 0.47
TTC3-209ENST00000438055 CLUL1Q15846 466 aa17.97■□□□□ 0.47
TTC3-209ENST00000438055 SLC9A9Q8IVB4 645 aa17.97■□□□□ 0.47
TTC3-209ENST00000438055 HEMGNQ9BXL5 484 aa17.97■□□□□ 0.47
TTC3-209ENST00000438055 TBC1D22BQ9NU19 505 aa17.97■□□□□ 0.47
TTC3-209ENST00000438055 INTS9Q9NV88 658 aaKnown RBP17.97■□□□□ 0.47
TTC3-209ENST00000438055 PFASO15067 1338 aa17.97■□□□□ 0.47
TTC3-209ENST00000438055 WDR64B1ANS9 1081 aa17.96■□□□□ 0.47
TTC3-209ENST00000438055 ECEL1O95672 775 aa17.96■□□□□ 0.47
TTC3-209ENST00000438055 MUTP22033 750 aa17.96■□□□□ 0.47
TTC3-209ENST00000438055 NFIL3Q16649 462 aa17.96■□□□□ 0.47
TTC3-209ENST00000438055 ICE2Q659A1 982 aa17.96■□□□□ 0.47
TTC3-209ENST00000438055 DUPD1Q68J44 220 aa17.96■□□□□ 0.47
TTC3-209ENST00000438055 RNF207Q6ZRF8 634 aa17.96■□□□□ 0.47
TTC3-209ENST00000438055 NIM1KQ8IY84 436 aa17.96■□□□□ 0.47
TTC3-209ENST00000438055 PLEKHO2Q8TD55 490 aa17.96■□□□□ 0.47
TTC3-209ENST00000438055 SYTL5Q8TDW5 730 aaPredicted RBP17.96■□□□□ 0.47
TTC3-209ENST00000438055 FAM118BQ9BPY3 351 aa17.96■□□□□ 0.47
TTC3-209ENST00000438055 PABPC3Q9H361 631 aaKnown RBP17.96■□□□□ 0.47
TTC3-209ENST00000438055 GABBR1Q9UBS5 961 aa17.96■□□□□ 0.47
TTC3-209ENST00000438055 NENFQ9UMX5 172 aa17.96■□□□□ 0.47
TTC3-209ENST00000438055 HSPA6P17066 643 aa17.96■□□□□ 0.47
TTC3-209ENST00000438055 VCAM1P19320 739 aa17.96■□□□□ 0.47
TTC3-209ENST00000438055 FBXL13Q8NEE6 735 aa17.96■□□□□ 0.47
TTC3-209ENST00000438055 SEMA4DQ92854 862 aa17.96■□□□□ 0.47
TTC3-209ENST00000438055 DBR1Q9UK59 544 aaKnown RBP17.96■□□□□ 0.47
TTC3-209ENST00000438055 C10orf71Q711Q0 1435 aa17.96■□□□□ 0.47
TTC3-209ENST00000438055 ZBED4O75132 1171 aa17.96■□□□□ 0.46
TTC3-209ENST00000438055 CHN1P15882 459 aa17.96■□□□□ 0.46
TTC3-209ENST00000438055 QPCTQ16769 361 aa17.96■□□□□ 0.46
TTC3-209ENST00000438055 PASD1Q8IV76 773 aa17.96■□□□□ 0.46
TTC3-209ENST00000438055 LMO3Q8TAP4 145 aa17.96■□□□□ 0.46
TTC3-209ENST00000438055 ATP8B4Q8TF62 1192 aa17.96■□□□□ 0.46
TTC3-209ENST00000438055 TATDN2Q93075 761 aa17.96■□□□□ 0.46
TTC3-209ENST00000438055 KREMEN1Q96MU8 473 aa17.96■□□□□ 0.46
TTC3-209ENST00000438055 EFCC1Q9HA90 598 aa17.96■□□□□ 0.46
TTC3-209ENST00000438055 MLXIPLQ9NP71 852 aa17.96■□□□□ 0.46
TTC3-209ENST00000438055 C1orf112Q9NSG2 853 aa17.96■□□□□ 0.46
TTC3-209ENST00000438055 PARP2Q9UGN5 583 aa17.96■□□□□ 0.46
TTC3-209ENST00000438055 SEPT9Q9UHD8 586 aaPredicted RBP17.96■□□□□ 0.46
TTC3-209ENST00000438055 ARFGEF1Q9Y6D6 1849 aa17.95■□□□□ 0.46
TTC3-209ENST00000438055 PODXLO00592 558 aa17.95■□□□□ 0.46
TTC3-209ENST00000438055 RASGRF2O14827 1237 aa17.95■□□□□ 0.46
TTC3-209ENST00000438055 KIAA0391O15091 583 aaKnown RBP17.95■□□□□ 0.46
TTC3-209ENST00000438055 CYP11B1P15538 503 aa17.95■□□□□ 0.46
TTC3-209ENST00000438055 NPTX2P47972 431 aa17.95■□□□□ 0.46
TTC3-209ENST00000438055 TTLL6Q8N841 843 aa17.95■□□□□ 0.46
TTC3-209ENST00000438055 ANKRD42Q8N9B4 389 aa17.95■□□□□ 0.46
TTC3-209ENST00000438055 EPS8L3Q8TE67 593 aaKnown RBP17.95■□□□□ 0.46
TTC3-209ENST00000438055 ATG4AQ8WYN0 398 aa17.95■□□□□ 0.46
TTC3-209ENST00000438055 WNT8AQ9H1J5 351 aa17.95■□□□□ 0.46
TTC3-209ENST00000438055 IFI35P80217 286 aaPredicted RBP17.95■□□□□ 0.46
TTC3-209ENST00000438055 MRPS9P82933 396 aaKnown RBP17.95■□□□□ 0.46
TTC3-209ENST00000438055 SLC13A5Q86YT5 568 aaPredicted RBP17.95■□□□□ 0.46
TTC3-209ENST00000438055 CPA5Q8WXQ8 436 aa17.95■□□□□ 0.46
TTC3-209ENST00000438055 SEC16BQ96JE7 1060 aa17.95■□□□□ 0.46
TTC3-209ENST00000438055 DDX20Q9UHI6 824 aaKnown RBP17.95■□□□□ 0.46
TTC3-209ENST00000438055 TBX20Q9UMR3 447 aa17.95■□□□□ 0.46
TTC3-209ENST00000438055 SPDYE2Q495Y8 402 aa17.95■□□□□ 0.46
TTC3-209ENST00000438055 WDR44Q5JSH3 913 aa17.95■□□□□ 0.46
TTC3-209ENST00000438055 RAB20Q9NX57 234 aa17.95■□□□□ 0.46
TTC3-209ENST00000438055 HNRNPH1P31943 449 aaKnown RBP17.94■□□□□ 0.46
TTC3-209ENST00000438055 RDXP35241 583 aaKnown RBP17.94■□□□□ 0.46
TTC3-209ENST00000438055 TTC27Q6P3X3 843 aa17.94■□□□□ 0.46
TTC3-209ENST00000438055 VTI1AQ96AJ9 217 aa17.94■□□□□ 0.46
TTC3-209ENST00000438055 CD2APQ9Y5K6 639 aa17.94■□□□□ 0.46
TTC3-209ENST00000438055 TRAPPC3O43617 180 aa17.94■□□□□ 0.46
TTC3-209ENST00000438055 PPFIA2O75334 1257 aa17.94■□□□□ 0.46
TTC3-209ENST00000438055 MTMR2Q13614 643 aa17.94■□□□□ 0.46
TTC3-209ENST00000438055 LRRC14Q15048 493 aa17.94■□□□□ 0.46
TTC3-209ENST00000438055 SWSAP1Q6NVH7 229 aa17.94■□□□□ 0.46
TTC3-209ENST00000438055 CYFIP1Q7L576 1253 aa17.94■□□□□ 0.46
TTC3-209ENST00000438055 GSTA5Q7RTV2 222 aa17.94■□□□□ 0.46
TTC3-209ENST00000438055 XPO6Q96QU8 1125 aaKnown RBP17.94■□□□□ 0.46
TTC3-209ENST00000438055 TTC7AQ9ULT0 858 aaPredicted RBP17.94■□□□□ 0.46
TTC3-209ENST00000438055 P4HA2O15460 535 aa17.93■□□□□ 0.46
TTC3-209ENST00000438055 RARAP10276 462 aa17.93■□□□□ 0.46
TTC3-209ENST00000438055 COILP38432 576 aaPredicted RBP17.93■□□□□ 0.46
TTC3-209ENST00000438055 ADCY8P40145 1251 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms