RNA–Protein interactions for RNA: ENST00000436461.6

CALD1-209, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 1,614 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-209ENST00000436461 TRAF3IP3Q9Y228 551 aa18.34■□□□□ 0.53
CALD1-209ENST00000436461 TRIP11Q15643 1979 aa18.34■□□□□ 0.53
CALD1-209ENST00000436461 CEP290O15078 2479 aa18.34■□□□□ 0.53
CALD1-209ENST00000436461 A0A0B4J269 797 aa18.34■□□□□ 0.53
CALD1-209ENST00000436461 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.34■□□□□ 0.53
CALD1-209ENST00000436461 MEIS3P2A8K0S8 358 aa18.34■□□□□ 0.53
CALD1-209ENST00000436461 CALUO43852 315 aaPredicted RBP18.34■□□□□ 0.53
CALD1-209ENST00000436461 NR3C1P04150 777 aa18.34■□□□□ 0.53
CALD1-209ENST00000436461 TNFSF9P41273 254 aa18.34■□□□□ 0.53
CALD1-209ENST00000436461 MAGEA10P43363 369 aaPredicted RBP18.34■□□□□ 0.53
CALD1-209ENST00000436461 ACOT2P49753 483 aa18.34■□□□□ 0.53
CALD1-209ENST00000436461 MCL1Q07820 350 aa18.34■□□□□ 0.53
CALD1-209ENST00000436461 LRSAM1Q6UWE0 723 aa18.34■□□□□ 0.53
CALD1-209ENST00000436461 ZNF365Q70YC5 407 aa18.34■□□□□ 0.53
CALD1-209ENST00000436461 LPPQ93052 612 aa18.34■□□□□ 0.53
CALD1-209ENST00000436461 DUSP9Q99956 384 aaKnown RBP18.34■□□□□ 0.53
CALD1-209ENST00000436461 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.34■□□□□ 0.532e-7■□□□□ 11.1
CALD1-209ENST00000436461 FTHL17Q9BXU8 183 aa18.34■□□□□ 0.53
CALD1-209ENST00000436461 RGS18Q9NS28 235 aa18.34■□□□□ 0.53
CALD1-209ENST00000436461 HSPBP1Q9NZL4 362 aa18.34■□□□□ 0.53
CALD1-209ENST00000436461 DACH1Q9UI36 760 aa18.34■□□□□ 0.53
CALD1-209ENST00000436461 STYXL1Q9Y6J8 313 aa18.34■□□□□ 0.53
CALD1-209ENST00000436461 RANBP2P49792 3224 aaKnown RBP18.33■□□□□ 0.53
CALD1-209ENST00000436461 H0YGN5 161 aa18.33■□□□□ 0.52
CALD1-209ENST00000436461 TULP1O00294 542 aaPredicted RBP18.33■□□□□ 0.52
CALD1-209ENST00000436461 ENPP3O14638 875 aa18.33■□□□□ 0.52
CALD1-209ENST00000436461 NR2F2P24468 414 aa18.33■□□□□ 0.52
CALD1-209ENST00000436461 PPP1R2P41236 205 aa18.33■□□□□ 0.52
CALD1-209ENST00000436461 TMCO2Q7Z6W1 182 aaPredicted RBP18.33■□□□□ 0.52
CALD1-209ENST00000436461 RDH13Q8NBN7 331 aa18.33■□□□□ 0.52
CALD1-209ENST00000436461 RNF169Q8NCN4 708 aa18.33■□□□□ 0.52
CALD1-209ENST00000436461 SMG8Q8ND04 991 aaKnown RBP18.33■□□□□ 0.52
CALD1-209ENST00000436461 TSG101Q99816 390 aa18.33■□□□□ 0.52
CALD1-209ENST00000436461 TSPYL2Q9H2G4 693 aaPredicted RBP18.33■□□□□ 0.52
CALD1-209ENST00000436461 RNF39Q9H2S5 420 aa18.33■□□□□ 0.52
CALD1-209ENST00000436461 SNTG2Q9NY99 539 aa18.33■□□□□ 0.52
CALD1-209ENST00000436461 RWDD2AQ9UIY3 292 aa18.33■□□□□ 0.52
CALD1-209ENST00000436461 AGO2Q9UKV8 859 aaKnown RBP18.33■□□□□ 0.52
CALD1-209ENST00000436461 IPPQ9Y573 584 aa18.33■□□□□ 0.52
CALD1-209ENST00000436461 PCDHB2Q9Y5E7 798 aa18.33■□□□□ 0.52
CALD1-209ENST00000436461 CITO14578 2027 aa18.32■□□□□ 0.52
CALD1-209ENST00000436461 FAM189A1O60320 539 aa18.32■□□□□ 0.52
CALD1-209ENST00000436461 ATF7P17544 494 aaPredicted RBP18.32■□□□□ 0.52
CALD1-209ENST00000436461 GARTP22102 1010 aa18.32■□□□□ 0.52
CALD1-209ENST00000436461 AKAP5P24588 427 aa18.32■□□□□ 0.52
CALD1-209ENST00000436461 CASP4P49662 377 aa18.32■□□□□ 0.52
CALD1-209ENST00000436461 IKBKEQ14164 716 aa18.32■□□□□ 0.52
CALD1-209ENST00000436461 TMEM240Q5SV17 173 aa18.32■□□□□ 0.52
CALD1-209ENST00000436461 SLFN12LQ6IEE8 588 aa18.32■□□□□ 0.52
CALD1-209ENST00000436461 CCDC51Q96ER9 411 aa18.32■□□□□ 0.52
CALD1-209ENST00000436461 FAM213AQ9BRX8 229 aa18.32■□□□□ 0.52
CALD1-209ENST00000436461 CXCL16Q9H2A7 254 aa18.32■□□□□ 0.52
CALD1-209ENST00000436461 RNF19AQ9NV58 838 aa18.32■□□□□ 0.52
CALD1-209ENST00000436461 ANK1P16157 1881 aa18.32■□□□□ 0.52
CALD1-209ENST00000436461 TTC3P53804 2025 aa18.31■□□□□ 0.52
CALD1-209ENST00000436461 C9IYK1 514 aa18.31■□□□□ 0.52
CALD1-209ENST00000436461 PFKMP08237 780 aa18.31■□□□□ 0.52
CALD1-209ENST00000436461 MCF2P10911 925 aa18.31■□□□□ 0.52
CALD1-209ENST00000436461 ZNF445P59923 1031 aa18.31■□□□□ 0.52
CALD1-209ENST00000436461 DEFB103AP81534 67 aa18.31■□□□□ 0.52
CALD1-209ENST00000436461 LRRC63Q05C16 580 aa18.31■□□□□ 0.52
CALD1-209ENST00000436461 ADAM9Q13443 819 aa18.31■□□□□ 0.52
CALD1-209ENST00000436461 DCAF4L1Q3SXM0 396 aa18.31■□□□□ 0.52
CALD1-209ENST00000436461 HSP90AA4PQ58FG1 418 aa18.31■□□□□ 0.52
CALD1-209ENST00000436461 CEP135Q66GS9 1140 aa18.31■□□□□ 0.52
CALD1-209ENST00000436461 CRELD2Q6UXH1 353 aaPredicted RBP18.31■□□□□ 0.52
CALD1-209ENST00000436461 CBWD2Q8IUF1 395 aa18.31■□□□□ 0.52
CALD1-209ENST00000436461 GOLGA5Q8TBA6 731 aa18.31■□□□□ 0.52
CALD1-209ENST00000436461 CXXC1Q9P0U4 656 aaPredicted RBP18.31■□□□□ 0.52
CALD1-209ENST00000436461 A0A0U1RQF3 1178 aa18.31■□□□□ 0.52
CALD1-209ENST00000436461 BICDL2A1A5D9 508 aa18.31■□□□□ 0.52
CALD1-209ENST00000436461 ZBBXA8MT70 800 aa18.31■□□□□ 0.52
CALD1-209ENST00000436461 OGTO15294 1046 aa18.31■□□□□ 0.52
CALD1-209ENST00000436461 FGBP02675 491 aa18.31■□□□□ 0.52
CALD1-209ENST00000436461 ERCC5P28715 1186 aaPredicted RBP18.31■□□□□ 0.52
CALD1-209ENST00000436461 LRRC55Q6ZSA7 311 aa18.31■□□□□ 0.52
CALD1-209ENST00000436461 SLC24A5Q71RS6 500 aa18.31■□□□□ 0.52
CALD1-209ENST00000436461 ECHDC2Q86YB7 292 aa18.31■□□□□ 0.52
CALD1-209ENST00000436461 C12orf56Q8IXR9 622 aa18.31■□□□□ 0.52
CALD1-209ENST00000436461 CSGALNACT2Q8N6G5 542 aa18.31■□□□□ 0.52
CALD1-209ENST00000436461 AOPEPQ8N6M6 819 aa18.31■□□□□ 0.52
CALD1-209ENST00000436461 TSPY26PQ9H489 355 aa18.31■□□□□ 0.52
CALD1-209ENST00000436461 DMAC2Q9NW81 257 aa18.31■□□□□ 0.52
CALD1-209ENST00000436461 KLK14Q9P0G3 267 aa18.31■□□□□ 0.52
CALD1-209ENST00000436461 MEFVO15553 781 aaPredicted RBP18.3■□□□□ 0.52
CALD1-209ENST00000436461 EXOC3O60645 756 aa18.3■□□□□ 0.52
CALD1-209ENST00000436461 UPP2O95045 317 aa18.3■□□□□ 0.52
CALD1-209ENST00000436461 ADRB2P07550 413 aa18.3■□□□□ 0.52
CALD1-209ENST00000436461 STAG3L1P0CL83 205 aa18.3■□□□□ 0.52
CALD1-209ENST00000436461 ZNF165P49910 485 aa18.3■□□□□ 0.52
CALD1-209ENST00000436461 WNT7BP56706 349 aa18.3■□□□□ 0.52
CALD1-209ENST00000436461 WDR5P61964 334 aaKnown RBP18.3■□□□□ 0.52
CALD1-209ENST00000436461 SNRPFP62306 86 aaKnown RBP18.3■□□□□ 0.52
CALD1-209ENST00000436461 EDRF1Q3B7T1 1238 aa18.3■□□□□ 0.52
CALD1-209ENST00000436461 C9orf50Q5SZB4 431 aa18.3■□□□□ 0.52
CALD1-209ENST00000436461 GPD1LQ8N335 351 aa18.3■□□□□ 0.52
CALD1-209ENST00000436461 XXYLT1Q8NBI6 393 aa18.3■□□□□ 0.52
CALD1-209ENST00000436461 SRRTQ9BXP5 876 aaKnown RBP18.3■□□□□ 0.52
CALD1-209ENST00000436461 CGNQ9P2M7 1197 aaKnown RBP18.3■□□□□ 0.52
CALD1-209ENST00000436461 PDE4DIPQ5VU43 2346 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms