RNA–Protein interactions for RNA: ENST00000435997.2

SPTLC1P4-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 4, humanhuman

BASIC

Gene SPTLC1P4, Length 260 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P4-201ENST00000435997 TDGQ13569 410 aa12.18□□□□□ -0.46
SPTLC1P4-201ENST00000435997 TFDP1Q14186 410 aa12.18□□□□□ -0.46
SPTLC1P4-201ENST00000435997 TPH2Q8IWU9 490 aa12.18□□□□□ -0.46
SPTLC1P4-201ENST00000435997 HDAC7Q8WUI4 952 aa12.18□□□□□ -0.46
SPTLC1P4-201ENST00000435997 MTMR9Q96QG7 549 aa12.18□□□□□ -0.46
SPTLC1P4-201ENST00000435997 IGSF9Q9P2J2 1179 aa12.18□□□□□ -0.46
SPTLC1P4-201ENST00000435997 EPS15L1Q9UBC2 864 aa12.18□□□□□ -0.46
SPTLC1P4-201ENST00000435997 ARID2Q68CP9 1835 aa12.18□□□□□ -0.46
SPTLC1P4-201ENST00000435997 A0A1B0GUA9 196 aa12.17□□□□□ -0.46
SPTLC1P4-201ENST00000435997 PRR23AA6NEV1 266 aa12.17□□□□□ -0.46
SPTLC1P4-201ENST00000435997 INO80B-WBP1J3KQ70 363 aa12.17□□□□□ -0.46
SPTLC1P4-201ENST00000435997 C2CD2LO14523 706 aa12.17□□□□□ -0.46
SPTLC1P4-201ENST00000435997 RFPL2O75678 378 aa12.17□□□□□ -0.46
SPTLC1P4-201ENST00000435997 LARGE1O95461 756 aa12.17□□□□□ -0.46
SPTLC1P4-201ENST00000435997 AOC1P19801 751 aa12.17□□□□□ -0.46
SPTLC1P4-201ENST00000435997 OR1G1P47890 313 aa12.17□□□□□ -0.46
SPTLC1P4-201ENST00000435997 GRIK3Q13003 919 aa12.17□□□□□ -0.46
SPTLC1P4-201ENST00000435997 ME3Q16798 604 aa12.17□□□□□ -0.46
SPTLC1P4-201ENST00000435997 CDCA2Q69YH5 1023 aaPredicted RBP12.17□□□□□ -0.46
SPTLC1P4-201ENST00000435997 FUT10Q6P4F1 479 aa12.17□□□□□ -0.46
SPTLC1P4-201ENST00000435997 ASCL5Q7RTU5 278 aa12.17□□□□□ -0.46
SPTLC1P4-201ENST00000435997 CCDC105Q8IYK2 499 aa12.17□□□□□ -0.46
SPTLC1P4-201ENST00000435997 NSUN7Q8NE18 718 aaKnown RBP12.17□□□□□ -0.46
SPTLC1P4-201ENST00000435997 WASF1Q92558 559 aa12.17□□□□□ -0.46
SPTLC1P4-201ENST00000435997 GTF3C6Q969F1 213 aa12.17□□□□□ -0.46
SPTLC1P4-201ENST00000435997 GPR62Q9BZJ7 368 aa12.17□□□□□ -0.46
SPTLC1P4-201ENST00000435997 PCDHA12Q9UN75 941 aa12.17□□□□□ -0.46
SPTLC1P4-201ENST00000435997 ZFHX2Q9C0A1 2572 aaPredicted RBP12.16□□□□□ -0.46
SPTLC1P4-201ENST00000435997 NEMFO60524 1076 aa12.16□□□□□ -0.46
SPTLC1P4-201ENST00000435997 BAG4O95429 457 aaKnown RBP12.16□□□□□ -0.46
SPTLC1P4-201ENST00000435997 SPATA31C1P0DKV0 1188 aa12.16□□□□□ -0.46
SPTLC1P4-201ENST00000435997 ST3GAL1Q11201 340 aa12.16□□□□□ -0.46
SPTLC1P4-201ENST00000435997 ANKRD1Q15327 319 aa12.16□□□□□ -0.46
SPTLC1P4-201ENST00000435997 CALCRLQ16602 461 aa12.16□□□□□ -0.46
SPTLC1P4-201ENST00000435997 LILRA6Q6PI73 481 aa12.16□□□□□ -0.46
SPTLC1P4-201ENST00000435997 POTEGQ6S5H5 508 aa12.16□□□□□ -0.46
SPTLC1P4-201ENST00000435997 STAMQ92783 540 aa12.16□□□□□ -0.46
SPTLC1P4-201ENST00000435997 B3GALT6Q96L58 329 aa12.16□□□□□ -0.46
SPTLC1P4-201ENST00000435997 SNX27Q96L92 541 aa12.16□□□□□ -0.46
SPTLC1P4-201ENST00000435997 PRIMPOLQ96LW4 560 aa12.16□□□□□ -0.46
SPTLC1P4-201ENST00000435997 MYADMQ96S97 322 aa12.16□□□□□ -0.46
SPTLC1P4-201ENST00000435997 POLR3FQ9H1D9 316 aaPredicted RBP12.16□□□□□ -0.46
SPTLC1P4-201ENST00000435997 MFSD1Q9H3U5 465 aa12.16□□□□□ -0.46
SPTLC1P4-201ENST00000435997 PLEKHA4Q9H4M7 779 aa12.16□□□□□ -0.46
SPTLC1P4-201ENST00000435997 TTC12Q9H892 705 aaPredicted RBP12.16□□□□□ -0.46
SPTLC1P4-201ENST00000435997 BRMS1Q9HCU9 246 aa12.16□□□□□ -0.46
SPTLC1P4-201ENST00000435997 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.16□□□□□ -0.46
SPTLC1P4-201ENST00000435997 ZDHHC7Q9NXF8 308 aa12.16□□□□□ -0.46
SPTLC1P4-201ENST00000435997 FNIP2Q9P278 1114 aa12.16□□□□□ -0.46
SPTLC1P4-201ENST00000435997 DPP7Q9UHL4 492 aa12.16□□□□□ -0.46
SPTLC1P4-201ENST00000435997 VPS13AQ96RL7 3174 aa12.16□□□□□ -0.46
SPTLC1P4-201ENST00000435997 DCHS1Q96JQ0 3298 aa12.15□□□□□ -0.46
SPTLC1P4-201ENST00000435997 CCDC195A0A1B0GUA6 201 aa12.15□□□□□ -0.46
SPTLC1P4-201ENST00000435997 POTEMA6NI47 508 aa12.15□□□□□ -0.46
SPTLC1P4-201ENST00000435997 SPDYE4A6NLX3 237 aa12.15□□□□□ -0.46
SPTLC1P4-201ENST00000435997 BTBD18B2RXH4 712 aa12.15□□□□□ -0.46
SPTLC1P4-201ENST00000435997 TGM5O43548 720 aa12.15□□□□□ -0.46
SPTLC1P4-201ENST00000435997 PI15O43692 258 aa12.15□□□□□ -0.46
SPTLC1P4-201ENST00000435997 NARSO43776 548 aaKnown RBP12.15□□□□□ -0.46
SPTLC1P4-201ENST00000435997 MARCH6O60337 910 aa12.15□□□□□ -0.46
SPTLC1P4-201ENST00000435997 XRCC6P12956 609 aaKnown RBP eCLIP12.15□□□□□ -0.46
SPTLC1P4-201ENST00000435997 AKAP5P24588 427 aa12.15□□□□□ -0.46
SPTLC1P4-201ENST00000435997 FAM187BQ17R55 369 aa12.15□□□□□ -0.46
SPTLC1P4-201ENST00000435997 SLC27A1Q6PCB7 646 aa12.15□□□□□ -0.46
SPTLC1P4-201ENST00000435997 ELMSAN1Q6PJG2 1045 aa12.15□□□□□ -0.46
SPTLC1P4-201ENST00000435997 HACE1Q8IYU2 909 aa12.15□□□□□ -0.46
SPTLC1P4-201ENST00000435997 SIX5Q8N196 739 aa12.15□□□□□ -0.46
SPTLC1P4-201ENST00000435997 PIGOQ8TEQ8 1089 aa12.15□□□□□ -0.46
SPTLC1P4-201ENST00000435997 COLEC11Q9BWP8 271 aa12.15□□□□□ -0.46
SPTLC1P4-201ENST00000435997 TRIM6Q9C030 488 aaPredicted RBP12.15□□□□□ -0.46
SPTLC1P4-201ENST00000435997 TMEM60Q9H2L4 133 aa12.15□□□□□ -0.46
SPTLC1P4-201ENST00000435997 GPRC5CQ9NQ84 441 aa12.15□□□□□ -0.46
SPTLC1P4-201ENST00000435997 ADAM28Q9UKQ2 775 aa12.15□□□□□ -0.46
SPTLC1P4-201ENST00000435997 C2orf16Q68DN1 1984 aa12.15□□□□□ -0.46
SPTLC1P4-201ENST00000435997 GVINP1Q7Z2Y8 2422 aa12.15□□□□□ -0.47
SPTLC1P4-201ENST00000435997 KRBA1A5PL33 1030 aa12.14□□□□□ -0.47
SPTLC1P4-201ENST00000435997 ANHXE9PGG2 379 aa12.14□□□□□ -0.47
SPTLC1P4-201ENST00000435997 PTGESO14684 152 aa12.14□□□□□ -0.47
SPTLC1P4-201ENST00000435997 USO1O60763 962 aaKnown RBP12.14□□□□□ -0.47
SPTLC1P4-201ENST00000435997 NR1I2O75469 434 aa12.14□□□□□ -0.47
SPTLC1P4-201ENST00000435997 NPTXRO95502 500 aa12.14□□□□□ -0.47
SPTLC1P4-201ENST00000435997 CREMQ03060 361 aa12.14□□□□□ -0.47
SPTLC1P4-201ENST00000435997 NCBP1Q09161 790 aaKnown RBP12.14□□□□□ -0.47
SPTLC1P4-201ENST00000435997 NAB2Q15742 525 aa12.14□□□□□ -0.47
SPTLC1P4-201ENST00000435997 USP41Q3LFD5 358 aa12.14□□□□□ -0.47
SPTLC1P4-201ENST00000435997 RTP2Q5QGT7 225 aa12.14□□□□□ -0.47
SPTLC1P4-201ENST00000435997 CDR2LQ86X02 465 aaPredicted RBP12.14□□□□□ -0.47
SPTLC1P4-201ENST00000435997 DIS3L2Q8IYB7 885 aaKnown RBP12.14□□□□□ -0.47
SPTLC1P4-201ENST00000435997 NECAB1Q8N987 351 aa12.14□□□□□ -0.47
SPTLC1P4-201ENST00000435997 FLCNQ8NFG4 579 aa12.14□□□□□ -0.47
SPTLC1P4-201ENST00000435997 RSAD2Q8WXG1 361 aa12.14□□□□□ -0.47
SPTLC1P4-201ENST00000435997 SMG7Q92540 1137 aaKnown RBP12.14□□□□□ -0.47
SPTLC1P4-201ENST00000435997 NXPE3Q969Y0 559 aa12.14□□□□□ -0.47
SPTLC1P4-201ENST00000435997 RTP3Q9BQQ7 232 aa12.14□□□□□ -0.47
SPTLC1P4-201ENST00000435997 PAAF1Q9BRP4 392 aa12.14□□□□□ -0.47
SPTLC1P4-201ENST00000435997 APOL6Q9BWW8 343 aa12.14□□□□□ -0.47
SPTLC1P4-201ENST00000435997 CCDC113Q9H0I3 377 aa12.14□□□□□ -0.47
SPTLC1P4-201ENST00000435997 NT5C3AQ9H0P0 336 aa12.14□□□□□ -0.47
SPTLC1P4-201ENST00000435997 FZD8Q9H461 694 aa12.14□□□□□ -0.47
SPTLC1P4-201ENST00000435997 CACNG4Q9UBN1 327 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms