RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 ATP5DP30049 168 aa7.96□□□□□ -1.14
CPSF6-202ENST00000435070 PSMC4P43686 418 aa7.96□□□□□ -1.14
CPSF6-202ENST00000435070 SLFN11Q7Z7L1 901 aa7.96□□□□□ -1.14
CPSF6-202ENST00000435070 ZBTB38Q8NAP3 1195 aaPredicted RBP7.96□□□□□ -1.14
CPSF6-202ENST00000435070 VTI1AQ96AJ9 217 aa7.96□□□□□ -1.14
CPSF6-202ENST00000435070 CLMNQ96JQ2 1002 aa7.96□□□□□ -1.14
CPSF6-202ENST00000435070 CENPKQ9BS16 269 aa7.96□□□□□ -1.14
CPSF6-202ENST00000435070 MAGEF1Q9HAY2 307 aa7.96□□□□□ -1.14
CPSF6-202ENST00000435070 MKNK2Q9HBH9 465 aa7.96□□□□□ -1.14
CPSF6-202ENST00000435070 KRT82Q9NSB4 513 aa7.96□□□□□ -1.14
CPSF6-202ENST00000435070 C2orf71A6NGG8 1288 aa7.96□□□□□ -1.14
CPSF6-202ENST00000435070 TDP2O95551 362 aa7.96□□□□□ -1.14
CPSF6-202ENST00000435070 CSF1RP07333 972 aa7.96□□□□□ -1.14
CPSF6-202ENST00000435070 CA4P22748 312 aa7.96□□□□□ -1.14
CPSF6-202ENST00000435070 AMPD1P23109 780 aa7.96□□□□□ -1.14
CPSF6-202ENST00000435070 GALK1P51570 392 aa7.96□□□□□ -1.14
CPSF6-202ENST00000435070 CTSWP56202 376 aa7.96□□□□□ -1.14
CPSF6-202ENST00000435070 TFAP4Q01664 338 aa7.96□□□□□ -1.14
CPSF6-202ENST00000435070 CALCRLQ16602 461 aa7.96□□□□□ -1.14
CPSF6-202ENST00000435070 C10orf76Q5T2E6 689 aa7.96□□□□□ -1.14
CPSF6-202ENST00000435070 VGLL2Q8N8G2 317 aa7.96□□□□□ -1.14
CPSF6-202ENST00000435070 LNX1Q8TBB1 728 aaPredicted RBP7.96□□□□□ -1.14
CPSF6-202ENST00000435070 ATG4AQ8WYN0 398 aa7.96□□□□□ -1.14
CPSF6-202ENST00000435070 INPP5DQ92835 1189 aa7.96□□□□□ -1.14
CPSF6-202ENST00000435070 PRR11Q96HE9 360 aaPredicted RBP7.96□□□□□ -1.14
CPSF6-202ENST00000435070 BTBD6Q96KE9 485 aa7.96□□□□□ -1.14
CPSF6-202ENST00000435070 AK8Q96MA6 479 aa7.96□□□□□ -1.14
CPSF6-202ENST00000435070 ARL8BQ9NVJ2 186 aa7.96□□□□□ -1.14
CPSF6-202ENST00000435070 PVALEFA0A1B0GWK0 134 aa7.95□□□□□ -1.14
CPSF6-202ENST00000435070 E9PMD0 336 aa7.95□□□□□ -1.14
CPSF6-202ENST00000435070 ATMINO43313 823 aaPredicted RBP7.95□□□□□ -1.14
CPSF6-202ENST00000435070 DLATP10515 647 aaKnown RBP7.95□□□□□ -1.14
CPSF6-202ENST00000435070 CHRNB2P17787 502 aa7.95□□□□□ -1.14
CPSF6-202ENST00000435070 PON1P27169 355 aa7.95□□□□□ -1.14
CPSF6-202ENST00000435070 STAT1P42224 750 aa7.95□□□□□ -1.14
CPSF6-202ENST00000435070 MTA1Q13330 715 aa7.95□□□□□ -1.14
CPSF6-202ENST00000435070 MTMR2Q13614 643 aa7.95□□□□□ -1.14
CPSF6-202ENST00000435070 NEK8Q86SG6 692 aa7.95□□□□□ -1.14
CPSF6-202ENST00000435070 KCNQ5Q9NR82 932 aa7.95□□□□□ -1.14
CPSF6-202ENST00000435070 TMOD3Q9NYL9 352 aa7.95□□□□□ -1.14
CPSF6-202ENST00000435070 ZBED4O75132 1171 aa7.95□□□□□ -1.14
CPSF6-202ENST00000435070 LMNAP02545 664 aaKnown RBP7.95□□□□□ -1.14
CPSF6-202ENST00000435070 CETN2P41208 172 aa7.95□□□□□ -1.14
CPSF6-202ENST00000435070 YARSP54577 528 aaKnown RBP7.95□□□□□ -1.14
CPSF6-202ENST00000435070 KCNQ4P56696 695 aa7.95□□□□□ -1.14
CPSF6-202ENST00000435070 OCRLQ01968 901 aa7.95□□□□□ -1.14
CPSF6-202ENST00000435070 MAP7Q14244 749 aa7.95□□□□□ -1.14
CPSF6-202ENST00000435070 CAVIN4Q5BKX8 364 aa7.95□□□□□ -1.14
CPSF6-202ENST00000435070 MFSD5Q6N075 450 aa7.95□□□□□ -1.14
CPSF6-202ENST00000435070 THEMISQ8N1K5 641 aaPredicted RBP7.95□□□□□ -1.14
CPSF6-202ENST00000435070 CABLES1Q8TDN4 633 aa7.95□□□□□ -1.14
CPSF6-202ENST00000435070 SH3TC2Q8TF17 1288 aa7.95□□□□□ -1.14
CPSF6-202ENST00000435070 FNBP1Q96RU3 617 aa7.95□□□□□ -1.14
CPSF6-202ENST00000435070 FBXO6Q9NRD1 293 aaPredicted RBP7.95□□□□□ -1.14
CPSF6-202ENST00000435070 HOMER2Q9NSB8 354 aa7.95□□□□□ -1.14
CPSF6-202ENST00000435070 GCNT4Q9P109 453 aa7.95□□□□□ -1.14
CPSF6-202ENST00000435070 PARP2Q9UGN5 583 aa7.95□□□□□ -1.14
CPSF6-202ENST00000435070 TDRKHQ9Y2W6 561 aaKnown RBP7.95□□□□□ -1.14
CPSF6-202ENST00000435070 NUMBLQ9Y6R0 609 aa7.95□□□□□ -1.14
CPSF6-202ENST00000435070 USP17L3A6NCW0 530 aa7.95□□□□□ -1.14
CPSF6-202ENST00000435070 USP17L4A6NCW7 530 aa7.95□□□□□ -1.14
CPSF6-202ENST00000435070 GYG1P46976 350 aa7.95□□□□□ -1.14
CPSF6-202ENST00000435070 USP17L1Q7RTZ2 530 aa7.95□□□□□ -1.14
CPSF6-202ENST00000435070 RFFLQ8WZ73 363 aa7.95□□□□□ -1.14
CPSF6-202ENST00000435070 SERPINB12Q96P63 405 aa7.95□□□□□ -1.14
CPSF6-202ENST00000435070 FAM192AQ9GZU8 254 aa7.95□□□□□ -1.14
CPSF6-202ENST00000435070 IKZF4Q9H2S9 585 aa7.95□□□□□ -1.14
CPSF6-202ENST00000435070 TMCO1Q9UM00 188 aa7.95□□□□□ -1.14
CPSF6-202ENST00000435070 ZNF652Q9Y2D9 606 aa7.95□□□□□ -1.14
CPSF6-202ENST00000435070 DIP2BQ9P265 1576 aa7.95□□□□□ -1.14
CPSF6-202ENST00000435070 CYTH3O43739 400 aa7.95□□□□□ -1.14
CPSF6-202ENST00000435070 STARD3NLO95772 234 aa7.95□□□□□ -1.14
CPSF6-202ENST00000435070 VAV1P15498 845 aa7.95□□□□□ -1.14
CPSF6-202ENST00000435070 TNFAIP3P21580 790 aa7.95□□□□□ -1.14
CPSF6-202ENST00000435070 CHRNA3P32297 505 aa7.95□□□□□ -1.14
CPSF6-202ENST00000435070 PIK3CAP42336 1068 aa7.95□□□□□ -1.14
CPSF6-202ENST00000435070 MFSD4BQ5TF39 518 aa7.95□□□□□ -1.14
CPSF6-202ENST00000435070 ROPN1BQ9BZX4 212 aaPredicted RBP7.95□□□□□ -1.14
CPSF6-202ENST00000435070 ROPN1Q9HAT0 212 aaPredicted RBP7.95□□□□□ -1.14
CPSF6-202ENST00000435070 EMILIN3Q9NT22 766 aa7.95□□□□□ -1.14
CPSF6-202ENST00000435070 ARMCX1Q9P291 453 aa7.95□□□□□ -1.14
CPSF6-202ENST00000435070 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.95□□□□□ -1.14
CPSF6-202ENST00000435070 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.95□□□□□ -1.14
CPSF6-202ENST00000435070 ATRNO75882 1429 aa7.95□□□□□ -1.14
CPSF6-202ENST00000435070 TNRQ92752 1358 aa7.95□□□□□ -1.14
CPSF6-202ENST00000435070 FAM47DPA6NHR8 397 aa7.95□□□□□ -1.14
CPSF6-202ENST00000435070 PODXLO00592 558 aa7.95□□□□□ -1.14
CPSF6-202ENST00000435070 ITGA2BP08514 1039 aa7.95□□□□□ -1.14
CPSF6-202ENST00000435070 PYGMP11217 842 aa7.95□□□□□ -1.14
CPSF6-202ENST00000435070 MKRN3Q13064 507 aaKnown RBP7.95□□□□□ -1.14
CPSF6-202ENST00000435070 ECM1Q16610 540 aa7.95□□□□□ -1.14
CPSF6-202ENST00000435070 SPDYCQ5MJ68 293 aa7.95□□□□□ -1.14
CPSF6-202ENST00000435070 SEL1L2Q5TEA6 688 aa7.95□□□□□ -1.14
CPSF6-202ENST00000435070 SATL1Q86VE3 508 aa7.95□□□□□ -1.14
CPSF6-202ENST00000435070 RNF168Q8IYW5 571 aaPredicted RBP7.95□□□□□ -1.14
CPSF6-202ENST00000435070 GRAMD1AQ96CP6 724 aa7.95□□□□□ -1.14
CPSF6-202ENST00000435070 HAUS1Q96CS2 278 aa7.95□□□□□ -1.14
CPSF6-202ENST00000435070 ATP8A2Q9NTI2 1148 aa7.95□□□□□ -1.14
CPSF6-202ENST00000435070 ANAPC4Q9UJX5 808 aa7.95□□□□□ -1.14
CPSF6-202ENST00000435070 ZNF510Q9Y2H8 683 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms