RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 LY6KQ17RY6 165 aa16.76■□□□□ 0.27
SCARF1-203ENST00000434376 TTMPQ5BVD1 217 aa16.76■□□□□ 0.27
SCARF1-203ENST00000434376 PRUNE1Q86TP1 453 aa16.76■□□□□ 0.27
SCARF1-203ENST00000434376 THNSL1Q8IYQ7 743 aa16.76■□□□□ 0.27
SCARF1-203ENST00000434376 GIMAP7Q8NHV1 300 aa16.76■□□□□ 0.27
SCARF1-203ENST00000434376 KIAA1683Q9H0B3 1180 aa16.76■□□□□ 0.27
SCARF1-203ENST00000434376 TBX20Q9UMR3 447 aa16.76■□□□□ 0.27
SCARF1-203ENST00000434376 PIK3R2O00459 728 aa16.75■□□□□ 0.27
SCARF1-203ENST00000434376 PJA2O43164 708 aa16.75■□□□□ 0.27
SCARF1-203ENST00000434376 SEMA3FQ13275 785 aa16.75■□□□□ 0.27
SCARF1-203ENST00000434376 KAZNQ674X7 775 aa16.75■□□□□ 0.27
SCARF1-203ENST00000434376 C1orf54Q8WWF1 131 aa16.75■□□□□ 0.27
SCARF1-203ENST00000434376 RPGRIP1Q96KN7 1286 aa16.75■□□□□ 0.27
SCARF1-203ENST00000434376 RNPC3Q96LT9 517 aaKnown RBP16.75■□□□□ 0.27
SCARF1-203ENST00000434376 SCLT1Q96NL6 688 aa16.75■□□□□ 0.27
SCARF1-203ENST00000434376 INPP4AQ96PE3 977 aaPredicted RBP16.75■□□□□ 0.27
SCARF1-203ENST00000434376 CCND2P30279 289 aa16.75■□□□□ 0.27
SCARF1-203ENST00000434376 WNT7BP56706 349 aa16.75■□□□□ 0.27
SCARF1-203ENST00000434376 EP400NLQ6ZTU2 488 aa16.75■□□□□ 0.27
SCARF1-203ENST00000434376 ATG4AQ8WYN0 398 aa16.75■□□□□ 0.27
SCARF1-203ENST00000434376 HAUS1Q96CS2 278 aa16.75■□□□□ 0.27
SCARF1-203ENST00000434376 C18orf8Q96DM3 657 aa16.75■□□□□ 0.27
SCARF1-203ENST00000434376 NLRP4Q96MN2 994 aa16.75■□□□□ 0.27
SCARF1-203ENST00000434376 PLAAQ9Y263 795 aa16.75■□□□□ 0.27
SCARF1-203ENST00000434376 CTNNA1P35221 906 aaKnown RBP16.75■□□□□ 0.27
SCARF1-203ENST00000434376 PCNX4Q63HM2 1172 aa16.75■□□□□ 0.27
SCARF1-203ENST00000434376 INTS8Q75QN2 995 aaKnown RBP16.75■□□□□ 0.27
SCARF1-203ENST00000434376 SV2AQ7L0J3 742 aa16.75■□□□□ 0.27
SCARF1-203ENST00000434376 NSUN6Q8TEA1 469 aaKnown RBP16.75■□□□□ 0.27
SCARF1-203ENST00000434376 COPS5Q92905 334 aa16.75■□□□□ 0.27
SCARF1-203ENST00000434376 IQCDQ96DY2 449 aa16.75■□□□□ 0.27
SCARF1-203ENST00000434376 IFT74Q96LB3 600 aa16.75■□□□□ 0.27
SCARF1-203ENST00000434376 KREMEN1Q96MU8 473 aa16.75■□□□□ 0.27
SCARF1-203ENST00000434376 EDEM3Q9BZQ6 932 aa16.75■□□□□ 0.27
SCARF1-203ENST00000434376 TBC1D22BQ9NU19 505 aa16.75■□□□□ 0.27
SCARF1-203ENST00000434376 SLC9A2Q9UBY0 812 aa16.75■□□□□ 0.27
SCARF1-203ENST00000434376 ODF2LQ9ULJ1 636 aa16.75■□□□□ 0.27
SCARF1-203ENST00000434376 UBIAD1Q9Y5Z9 338 aa16.75■□□□□ 0.27
SCARF1-203ENST00000434376 TARSL2A2RTX5 802 aaKnown RBP16.74■□□□□ 0.27
SCARF1-203ENST00000434376 TTLL13PA6NNM8 815 aa16.74■□□□□ 0.27
SCARF1-203ENST00000434376 GOLGA8KD6RF30 607 aa16.74■□□□□ 0.27
SCARF1-203ENST00000434376 NPM3O75607 178 aaKnown RBP16.74■□□□□ 0.27
SCARF1-203ENST00000434376 CFHP08603 1231 aa16.74■□□□□ 0.27
SCARF1-203ENST00000434376 KRT19P08727 400 aa16.74■□□□□ 0.27
SCARF1-203ENST00000434376 TMOD1P28289 359 aa16.74■□□□□ 0.27
SCARF1-203ENST00000434376 PSMC4P43686 418 aa16.74■□□□□ 0.27
SCARF1-203ENST00000434376 TAX1BP1Q86VP1 789 aa16.74■□□□□ 0.27
SCARF1-203ENST00000434376 MMGT1Q8N4V1 131 aa16.74■□□□□ 0.27
SCARF1-203ENST00000434376 DEPTORQ8TB45 409 aa16.74■□□□□ 0.27
SCARF1-203ENST00000434376 C11orf70Q9BRQ4 267 aa16.74■□□□□ 0.27
SCARF1-203ENST00000434376 MOV10L1Q9BXT6 1211 aaKnown RBP16.74■□□□□ 0.27
SCARF1-203ENST00000434376 CD2APQ9Y5K6 639 aa16.74■□□□□ 0.27
SCARF1-203ENST00000434376 RGS20O76081 388 aa16.74■□□□□ 0.27
SCARF1-203ENST00000434376 COMTP21964 271 aa16.74■□□□□ 0.27
SCARF1-203ENST00000434376 HIRAP54198 1017 aaPredicted RBP16.74■□□□□ 0.27
SCARF1-203ENST00000434376 EPHB4P54760 987 aa16.74■□□□□ 0.27
SCARF1-203ENST00000434376 NLRP11P59045 1033 aaKnown RBP16.74■□□□□ 0.27
SCARF1-203ENST00000434376 PPATQ06203 517 aa16.74■□□□□ 0.27
SCARF1-203ENST00000434376 PAK2Q13177 524 aa16.74■□□□□ 0.27
SCARF1-203ENST00000434376 IFI16Q16666 785 aaKnown RBP16.74■□□□□ 0.27
SCARF1-203ENST00000434376 CCDC105Q8IYK2 499 aa16.74■□□□□ 0.27
SCARF1-203ENST00000434376 SCYL3Q8IZE3 742 aa16.74■□□□□ 0.27
SCARF1-203ENST00000434376 LPAR1Q92633 364 aa16.74■□□□□ 0.27
SCARF1-203ENST00000434376 MAGOHBQ96A72 148 aaKnown RBP16.74■□□□□ 0.27
SCARF1-203ENST00000434376 LRRC4CQ9HCJ2 640 aa16.74■□□□□ 0.27
SCARF1-203ENST00000434376 GEMIN8Q9NWZ8 242 aaKnown RBP16.74■□□□□ 0.27
SCARF1-203ENST00000434376 ZC3H4Q9UPT8 1303 aaKnown RBP16.74■□□□□ 0.27
SCARF1-203ENST00000434376 EIF3DO15371 548 aaKnown RBP eCLIP16.73■□□□□ 0.27
SCARF1-203ENST00000434376 SLC16A3O15427 465 aaKnown RBP16.73■□□□□ 0.27
SCARF1-203ENST00000434376 MARSP56192 900 aaKnown RBP16.73■□□□□ 0.27
SCARF1-203ENST00000434376 DCAF15Q66K64 600 aa16.73■□□□□ 0.27
SCARF1-203ENST00000434376 TMEM270Q6UE05 265 aa16.73■□□□□ 0.27
SCARF1-203ENST00000434376 NUP85Q9BW27 656 aa16.73■□□□□ 0.27
SCARF1-203ENST00000434376 CXorf56Q9H5V9 222 aa16.73■□□□□ 0.27
SCARF1-203ENST00000434376 PCDHGC5Q9Y5F6 944 aa16.73■□□□□ 0.27
SCARF1-203ENST00000434376 BZW2Q9Y6E2 419 aaKnown RBP16.73■□□□□ 0.27
SCARF1-203ENST00000434376 GOLGA6L10A6NI86 522 aa16.73■□□□□ 0.27
SCARF1-203ENST00000434376 LCA5LO95447 670 aa16.73■□□□□ 0.27
SCARF1-203ENST00000434376 LMNB1P20700 586 aa16.73■□□□□ 0.27
SCARF1-203ENST00000434376 KCNV1Q6PIU1 500 aa16.73■□□□□ 0.27
SCARF1-203ENST00000434376 TMEM206Q9H813 350 aa16.73■□□□□ 0.27
SCARF1-203ENST00000434376 FBXO40Q9UH90 709 aa16.73■□□□□ 0.27
SCARF1-203ENST00000434376 FBXL5Q9UKA1 691 aa16.73■□□□□ 0.27
SCARF1-203ENST00000434376 GOLGA6L7A0A1B0GV03 622 aa16.73■□□□□ 0.27
SCARF1-203ENST00000434376 FOXO6A8MYZ6 492 aa16.73■□□□□ 0.27
SCARF1-203ENST00000434376 PI4K2BG5E9Z4 385 aa16.73■□□□□ 0.27
SCARF1-203ENST00000434376 NT5DC3Q86UY8 548 aa16.73■□□□□ 0.27
SCARF1-203ENST00000434376 TMEM161BQ8NDZ6 487 aa16.73■□□□□ 0.27
SCARF1-203ENST00000434376 AENQ8WTP8 325 aaKnown RBP16.73■□□□□ 0.27
SCARF1-203ENST00000434376 BORCS6Q96GS4 357 aa16.73■□□□□ 0.27
SCARF1-203ENST00000434376 CCDC114Q96M63 670 aa16.73■□□□□ 0.27
SCARF1-203ENST00000434376 NT5C1BQ96P26 610 aa16.73■□□□□ 0.27
SCARF1-203ENST00000434376 NXF1Q9UBU9 619 aaKnown RBP16.73■□□□□ 0.27
SCARF1-203ENST00000434376 ARFGEF1Q9Y6D6 1849 aa16.72■□□□□ 0.27
SCARF1-203ENST00000434376 K7ERI5 159 aa16.72■□□□□ 0.27
SCARF1-203ENST00000434376 HMGB2P26583 209 aaKnown RBP16.72■□□□□ 0.27
SCARF1-203ENST00000434376 PIK3CAP42336 1068 aa16.72■□□□□ 0.27
SCARF1-203ENST00000434376 E2F5Q15329 346 aa16.72■□□□□ 0.27
SCARF1-203ENST00000434376 CCDC38Q502W7 563 aa16.72■□□□□ 0.27
SCARF1-203ENST00000434376 UBAP2Q5T6F2 1119 aaKnown RBP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms