RNA–Protein interactions for RNA: ENST00000433972.1

RPUSD3-208, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-208ENST00000433972 C2CD2LO14523 706 aa16.48■□□□□ 0.23
RPUSD3-208ENST00000433972 B4GALT3O60512 393 aa16.48■□□□□ 0.23
RPUSD3-208ENST00000433972 USO1O60763 962 aaKnown RBP16.48■□□□□ 0.23
RPUSD3-208ENST00000433972 WEE2P0C1S8 567 aa16.48■□□□□ 0.23
RPUSD3-208ENST00000433972 ARF4P18085 180 aaPredicted RBP16.48■□□□□ 0.23
RPUSD3-208ENST00000433972 GLRA2P23416 452 aa16.48■□□□□ 0.23
RPUSD3-208ENST00000433972 SCNN1GP51170 649 aa16.48■□□□□ 0.23
RPUSD3-208ENST00000433972 AFF1P51825 1210 aaKnown RBP16.48■□□□□ 0.23
RPUSD3-208ENST00000433972 GRIK3Q13003 919 aa16.48■□□□□ 0.23
RPUSD3-208ENST00000433972 ASAP3Q8TDY4 903 aa16.48■□□□□ 0.23
RPUSD3-208ENST00000433972 PIGOQ8TEQ8 1089 aa16.48■□□□□ 0.23
RPUSD3-208ENST00000433972 NACC1Q96RE7 527 aa16.48■□□□□ 0.23
RPUSD3-208ENST00000433972 APOL6Q9BWW8 343 aa16.48■□□□□ 0.23
RPUSD3-208ENST00000433972 MFSD1Q9H3U5 465 aa16.48■□□□□ 0.23
RPUSD3-208ENST00000433972 MAN1C1Q9NR34 630 aa16.48■□□□□ 0.23
RPUSD3-208ENST00000433972 MARCH5Q9NX47 278 aa16.48■□□□□ 0.23
RPUSD3-208ENST00000433972 LIMD1Q9UGP4 676 aa16.48■□□□□ 0.23
RPUSD3-208ENST00000433972 CDH22Q9UJ99 828 aa16.48■□□□□ 0.23
RPUSD3-208ENST00000433972 A0A1B0GUA9 196 aa16.47■□□□□ 0.23
RPUSD3-208ENST00000433972 DTNBO60941 627 aa16.47■□□□□ 0.23
RPUSD3-208ENST00000433972 BRD1O95696 1058 aa16.47■□□□□ 0.23
RPUSD3-208ENST00000433972 ATP2B1P20020 1258 aa16.47■□□□□ 0.23
RPUSD3-208ENST00000433972 MUTP22033 750 aa16.47■□□□□ 0.23
RPUSD3-208ENST00000433972 DSG1Q02413 1049 aa16.47■□□□□ 0.23
RPUSD3-208ENST00000433972 GNL2Q13823 731 aaKnown RBP16.47■□□□□ 0.23
RPUSD3-208ENST00000433972 AMHR2Q16671 573 aa16.47■□□□□ 0.23
RPUSD3-208ENST00000433972 HAUS3Q68CZ6 603 aa16.47■□□□□ 0.23
RPUSD3-208ENST00000433972 PPP4R3CPQ6ZMV5 832 aa16.47■□□□□ 0.23
RPUSD3-208ENST00000433972 ADPGKQ9BRR6 497 aa16.47■□□□□ 0.23
RPUSD3-208ENST00000433972 POLR3CQ9BUI4 534 aaPredicted RBP16.47■□□□□ 0.23
RPUSD3-208ENST00000433972 NXF3Q9H4D5 531 aaKnown RBP16.47■□□□□ 0.23
RPUSD3-208ENST00000433972 PLEKHA4Q9H4M7 779 aa16.47■□□□□ 0.23
RPUSD3-208ENST00000433972 RXFP1Q9HBX9 757 aa16.47■□□□□ 0.23
RPUSD3-208ENST00000433972 HES2Q9Y543 173 aa16.47■□□□□ 0.23
RPUSD3-208ENST00000433972 STK24Q9Y6E0 443 aa16.47■□□□□ 0.23
RPUSD3-208ENST00000433972 ZNF318Q5VUA4 2279 aa16.46■□□□□ 0.23
RPUSD3-208ENST00000433972 POTEMA6NI47 508 aa16.46■□□□□ 0.23
RPUSD3-208ENST00000433972 N4BP3O15049 544 aa16.46■□□□□ 0.23
RPUSD3-208ENST00000433972 TEX28O15482 410 aa16.46■□□□□ 0.23
RPUSD3-208ENST00000433972 NPTXRO95502 500 aa16.46■□□□□ 0.23
RPUSD3-208ENST00000433972 MCM7P33993 719 aa16.46■□□□□ 0.23
RPUSD3-208ENST00000433972 FOSBP53539 338 aa16.46■□□□□ 0.23
RPUSD3-208ENST00000433972 VCPP55072 806 aaKnown RBP16.46■□□□□ 0.23
RPUSD3-208ENST00000433972 ST3GAL1Q11201 340 aa16.46■□□□□ 0.23
RPUSD3-208ENST00000433972 TCF15Q12870 199 aa16.46■□□□□ 0.23
RPUSD3-208ENST00000433972 PPP2R5AQ15172 486 aa16.46■□□□□ 0.23
RPUSD3-208ENST00000433972 MAPK6Q16659 721 aa16.46■□□□□ 0.23
RPUSD3-208ENST00000433972 TMEM132AQ24JP5 1023 aa16.46■□□□□ 0.23
RPUSD3-208ENST00000433972 USP41Q3LFD5 358 aa16.46■□□□□ 0.23
RPUSD3-208ENST00000433972 RNF168Q8IYW5 571 aaPredicted RBP16.46■□□□□ 0.23
RPUSD3-208ENST00000433972 ZFP42Q96MM3 310 aa16.46■□□□□ 0.23
RPUSD3-208ENST00000433972 RNF39Q9H2S5 420 aa16.46■□□□□ 0.23
RPUSD3-208ENST00000433972 IGSF9Q9P2J2 1179 aa16.46■□□□□ 0.23
RPUSD3-208ENST00000433972 PARP2Q9UGN5 583 aa16.46■□□□□ 0.23
RPUSD3-208ENST00000433972 ADAM28Q9UKQ2 775 aa16.46■□□□□ 0.23
RPUSD3-208ENST00000433972 SMC3Q9UQE7 1217 aa16.46■□□□□ 0.23
RPUSD3-208ENST00000433972 SF3B1O75533 1304 aaKnown RBP eCLIP16.45■□□□□ 0.221e-6■■■■■ 66.8
RPUSD3-208ENST00000433972 ARHGEF35A5YM69 484 aa16.45■□□□□ 0.22
RPUSD3-208ENST00000433972 TADA2AO75478 443 aa16.45■□□□□ 0.22
RPUSD3-208ENST00000433972 ASGR2P07307 311 aa16.45■□□□□ 0.22
RPUSD3-208ENST00000433972 RPA1P27694 616 aa16.45■□□□□ 0.22
RPUSD3-208ENST00000433972 TDGQ13569 410 aa16.45■□□□□ 0.22
RPUSD3-208ENST00000433972 FAM187BQ17R55 369 aa16.45■□□□□ 0.22
RPUSD3-208ENST00000433972 KIAA0319Q5VV43 1072 aa16.45■□□□□ 0.22
RPUSD3-208ENST00000433972 CDCA2Q69YH5 1023 aaPredicted RBP16.45■□□□□ 0.22
RPUSD3-208ENST00000433972 FUT10Q6P4F1 479 aa16.45■□□□□ 0.22
RPUSD3-208ENST00000433972 APBB1IPQ7Z5R6 666 aaPredicted RBP16.45■□□□□ 0.22
RPUSD3-208ENST00000433972 CATSPER3Q86XQ3 398 aa16.45■□□□□ 0.22
RPUSD3-208ENST00000433972 ATOH1Q92858 354 aaPredicted RBP16.45■□□□□ 0.22
RPUSD3-208ENST00000433972 NXPE3Q969Y0 559 aa16.45■□□□□ 0.22
RPUSD3-208ENST00000433972 FOXP1Q9H334 677 aaPredicted RBP16.45■□□□□ 0.22
RPUSD3-208ENST00000433972 CHST7Q9NS84 486 aa16.45■□□□□ 0.22
RPUSD3-208ENST00000433972 ZDHHC7Q9NXF8 308 aa16.45■□□□□ 0.22
RPUSD3-208ENST00000433972 FNIP2Q9P278 1114 aa16.45■□□□□ 0.22
RPUSD3-208ENST00000433972 CCDC195A0A1B0GUA6 201 aa16.44■□□□□ 0.22
RPUSD3-208ENST00000433972 GALR2O43603 387 aaPredicted RBP16.44■□□□□ 0.22
RPUSD3-208ENST00000433972 EFEMP2O95967 443 aa16.44■□□□□ 0.22
RPUSD3-208ENST00000433972 OR52Z1P0C646 297 aa16.44■□□□□ 0.22
RPUSD3-208ENST00000433972 SPATA31C1P0DKV0 1188 aa16.44■□□□□ 0.22
RPUSD3-208ENST00000433972 AKAP5P24588 427 aa16.44■□□□□ 0.22
RPUSD3-208ENST00000433972 NAMPTP43490 491 aa16.44■□□□□ 0.22
RPUSD3-208ENST00000433972 TRAPPC10P48553 1259 aa16.44■□□□□ 0.22
RPUSD3-208ENST00000433972 CLCN5P51795 746 aa16.44■□□□□ 0.22
RPUSD3-208ENST00000433972 ASTLQ6HA08 431 aaPredicted RBP16.44■□□□□ 0.22
RPUSD3-208ENST00000433972 KANK3Q6NY19 840 aa16.44■□□□□ 0.22
RPUSD3-208ENST00000433972 PDXDC1Q6P996 788 aa16.44■□□□□ 0.22
RPUSD3-208ENST00000433972 FBXO18Q8NFZ0 1043 aa16.44■□□□□ 0.22
RPUSD3-208ENST00000433972 RAB34Q9BZG1 259 aa16.44■□□□□ 0.22
RPUSD3-208ENST00000433972 FZD8Q9H461 694 aa16.44■□□□□ 0.22
RPUSD3-208ENST00000433972 WDR6Q9NNW5 1121 aaKnown RBP16.44■□□□□ 0.22
RPUSD3-208ENST00000433972 NOL7Q9UMY1 257 aaKnown RBP16.44■□□□□ 0.22
RPUSD3-208ENST00000433972 DUSP12Q9UNI6 340 aa16.44■□□□□ 0.22
RPUSD3-208ENST00000433972 B4GALT5O43286 388 aa16.43■□□□□ 0.22
RPUSD3-208ENST00000433972 CD2BP2O95400 341 aaKnown RBP16.43■□□□□ 0.22
RPUSD3-208ENST00000433972 EFNA5P52803 228 aa16.43■□□□□ 0.22
RPUSD3-208ENST00000433972 ELAVL2Q12926 359 aaKnown RBP16.43■□□□□ 0.22
RPUSD3-208ENST00000433972 TUSC3Q13454 348 aa16.43■□□□□ 0.22
RPUSD3-208ENST00000433972 PRPF4BQ13523 1007 aaKnown RBP16.43■□□□□ 0.22
RPUSD3-208ENST00000433972 HSP90AA2PQ14568 343 aaPredicted RBP16.43■□□□□ 0.22
RPUSD3-208ENST00000433972 MAEAQ7L5Y9 396 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms