RNA–Protein interactions for RNA: ENST00000433655.5

CTSD-204, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 2,006 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-204ENST00000433655 GOLGA6CA6NDK9 693 aa18.33■□□□□ 0.53
CTSD-204ENST00000433655 GOLGA8KD6RF30 607 aa18.33■□□□□ 0.53
CTSD-204ENST00000433655 FGGP02679 453 aa18.33■□□□□ 0.53
CTSD-204ENST00000433655 GOLGA6DP0CG33 693 aa18.33■□□□□ 0.53
CTSD-204ENST00000433655 ATP4AP20648 1035 aa18.33■□□□□ 0.53
CTSD-204ENST00000433655 USP8P40818 1118 aa18.33■□□□□ 0.53
CTSD-204ENST00000433655 HIRAP54198 1017 aaPredicted RBP18.33■□□□□ 0.53
CTSD-204ENST00000433655 FMO1Q01740 532 aa18.33■□□□□ 0.53
CTSD-204ENST00000433655 PRPF4BQ13523 1007 aaKnown RBP18.33■□□□□ 0.53
CTSD-204ENST00000433655 TAF3Q5VWG9 929 aa18.33■□□□□ 0.53
CTSD-204ENST00000433655 C11orf63Q6NUN7 778 aa18.33■□□□□ 0.53
CTSD-204ENST00000433655 DDX42Q86XP3 938 aaKnown RBP eCLIP18.33■□□□□ 0.53
CTSD-204ENST00000433655 MCPH1Q8NEM0 835 aa18.33■□□□□ 0.53
CTSD-204ENST00000433655 CARD9Q9H257 536 aa18.33■□□□□ 0.53
CTSD-204ENST00000433655 SLITRK6Q9H5Y7 841 aa18.33■□□□□ 0.53
CTSD-204ENST00000433655 GOLGA6AQ9NYA3 693 aa18.33■□□□□ 0.53
CTSD-204ENST00000433655 CALCOCO1Q9P1Z2 691 aa18.33■□□□□ 0.53
CTSD-204ENST00000433655 AMACRQ9UHK6 382 aa18.33■□□□□ 0.53
CTSD-204ENST00000433655 OTOFQ9HC10 1997 aa18.33■□□□□ 0.53
CTSD-204ENST00000433655 OPA1O60313 960 aa18.33■□□□□ 0.52
CTSD-204ENST00000433655 DKC1O60832 514 aaKnown RBP eCLIP18.33■□□□□ 0.521e-14■□□□□ 9.7
CTSD-204ENST00000433655 RTN2O75298 545 aa18.33■□□□□ 0.52
CTSD-204ENST00000433655 STAM2O75886 525 aa18.33■□□□□ 0.52
CTSD-204ENST00000433655 MMEP08473 750 aa18.33■□□□□ 0.52
CTSD-204ENST00000433655 SUPT20HL2P0C7V6 817 aa18.33■□□□□ 0.52
CTSD-204ENST00000433655 HSPA9P38646 679 aaKnown RBP18.33■□□□□ 0.52
CTSD-204ENST00000433655 MFAP3P55082 362 aa18.33■□□□□ 0.52
CTSD-204ENST00000433655 SUPT20HL1Q3ZLR7 823 aa18.33■□□□□ 0.52
CTSD-204ENST00000433655 POMGNT1Q8WZA1 660 aa18.33■□□□□ 0.52
CTSD-204ENST00000433655 CDHR1Q96JP9 859 aa18.33■□□□□ 0.52
CTSD-204ENST00000433655 FAM84AQ96KN4 292 aa18.33■□□□□ 0.52
CTSD-204ENST00000433655 RNPC3Q96LT9 517 aaKnown RBP18.33■□□□□ 0.52
CTSD-204ENST00000433655 POLR3FQ9H1D9 316 aaPredicted RBP18.33■□□□□ 0.52
CTSD-204ENST00000433655 ATP6V0A4Q9HBG4 840 aa18.33■□□□□ 0.52
CTSD-204ENST00000433655 GPRC5DQ9NZD1 345 aa18.33■□□□□ 0.52
CTSD-204ENST00000433655 DIS3Q9Y2L1 958 aaKnown RBP18.33■□□□□ 0.52
CTSD-204ENST00000433655 CD2APQ9Y5K6 639 aa18.33■□□□□ 0.52
CTSD-204ENST00000433655 ZNF233A6NK53 670 aa18.32■□□□□ 0.52
CTSD-204ENST00000433655 SHOX2O60902 331 aaPredicted RBP18.32■□□□□ 0.52
CTSD-204ENST00000433655 MTA2O94776 668 aa18.32■□□□□ 0.52
CTSD-204ENST00000433655 GPC5P78333 572 aa18.32■□□□□ 0.52
CTSD-204ENST00000433655 CUL1Q13616 776 aa18.32■□□□□ 0.52
CTSD-204ENST00000433655 SV2AQ7L0J3 742 aa18.32■□□□□ 0.52
CTSD-204ENST00000433655 GPD1LQ8N335 351 aa18.32■□□□□ 0.52
CTSD-204ENST00000433655 FBXL13Q8NEE6 735 aa18.32■□□□□ 0.52
CTSD-204ENST00000433655 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.32■□□□□ 0.521e-19■■■□□ 18.6
CTSD-204ENST00000433655 FAM76AQ8TAV0 307 aa18.32■□□□□ 0.52
CTSD-204ENST00000433655 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.32■□□□□ 0.525e-8■■■■■ 65.3
CTSD-204ENST00000433655 SEC14L1Q92503 715 aa18.32■□□□□ 0.52
CTSD-204ENST00000433655 PKNOX2Q96KN3 472 aa18.32■□□□□ 0.52
CTSD-204ENST00000433655 RAB20Q9NX57 234 aa18.32■□□□□ 0.52
CTSD-204ENST00000433655 TMOD4Q9NZQ9 345 aa18.32■□□□□ 0.52
CTSD-204ENST00000433655 CHORDC1Q9UHD1 332 aaPredicted RBP18.32■□□□□ 0.52
CTSD-204ENST00000433655 ALG6Q9Y672 507 aa18.32■□□□□ 0.52
CTSD-204ENST00000433655 LRRC37A2A6NM11 1700 aa18.32■□□□□ 0.52
CTSD-204ENST00000433655 MYPNQ86TC9 1320 aa18.32■□□□□ 0.52
CTSD-204ENST00000433655 HNRNPDLO14979 420 aaKnown RBP18.32■□□□□ 0.52
CTSD-204ENST00000433655 ATMINO43313 823 aaPredicted RBP18.32■□□□□ 0.52
CTSD-204ENST00000433655 PEX10O60683 326 aa18.32■□□□□ 0.52
CTSD-204ENST00000433655 GZMAP12544 262 aa18.32■□□□□ 0.52
CTSD-204ENST00000433655 GARTP22102 1010 aa18.32■□□□□ 0.52
CTSD-204ENST00000433655 GTF2H1P32780 548 aa18.32■□□□□ 0.52
CTSD-204ENST00000433655 ZNF211Q13398 564 aaPredicted RBP18.32■□□□□ 0.52
CTSD-204ENST00000433655 BRDTQ58F21 947 aaPredicted RBP18.32■□□□□ 0.52
CTSD-204ENST00000433655 LRRC31Q6UY01 552 aa18.32■□□□□ 0.52
CTSD-204ENST00000433655 GOLGA6L1Q8N7Z2 621 aa18.32■□□□□ 0.52
CTSD-204ENST00000433655 DDX1Q92499 740 aaKnown RBP18.32■□□□□ 0.52
CTSD-204ENST00000433655 DHX38Q92620 1227 aaKnown RBP18.32■□□□□ 0.52
CTSD-204ENST00000433655 TATDN2Q93075 761 aa18.32■□□□□ 0.52
CTSD-204ENST00000433655 CELF4Q9BZC1 486 aaKnown RBP18.32■□□□□ 0.52
CTSD-204ENST00000433655 ERVK-5Q9HDB9 667 aa18.32■□□□□ 0.52
CTSD-204ENST00000433655 CTTNBP2NLQ9P2B4 639 aa18.32■□□□□ 0.52
CTSD-204ENST00000433655 DICER1Q9UPY3 1922 aaKnown RBP18.31■□□□□ 0.52
CTSD-204ENST00000433655 TTI1O43156 1089 aa18.31■□□□□ 0.52
CTSD-204ENST00000433655 KRT14P02533 472 aa18.31■□□□□ 0.52
CTSD-204ENST00000433655 CYP11B1P15538 503 aa18.31■□□□□ 0.52
CTSD-204ENST00000433655 MARCKSL1P49006 195 aa18.31■□□□□ 0.52
CTSD-204ENST00000433655 PPFIA1Q13136 1202 aa18.31■□□□□ 0.52
CTSD-204ENST00000433655 GNPTABQ3T906 1256 aa18.31■□□□□ 0.52
CTSD-204ENST00000433655 MTERF2Q49AM1 385 aa18.31■□□□□ 0.52
CTSD-204ENST00000433655 SH3D19Q5HYK7 790 aa18.31■□□□□ 0.52
CTSD-204ENST00000433655 CFAP58Q5T655 872 aa18.31■□□□□ 0.52
CTSD-204ENST00000433655 NAA35Q5VZE5 725 aa18.31■□□□□ 0.52
CTSD-204ENST00000433655 MIS18BP1Q6P0N0 1132 aa18.31■□□□□ 0.52
CTSD-204ENST00000433655 C15orf39Q6ZRI6 1047 aa18.31■□□□□ 0.52
CTSD-204ENST00000433655 KRT35Q92764 455 aa18.31■□□□□ 0.52
CTSD-204ENST00000433655 NT5C1BQ96P26 610 aa18.31■□□□□ 0.52
CTSD-204ENST00000433655 SYNGAP1Q96PV0 1343 aa18.31■□□□□ 0.52
CTSD-204ENST00000433655 ATG7O95352 703 aa18.3■□□□□ 0.52
CTSD-204ENST00000433655 ICAM3P32942 547 aa18.3■□□□□ 0.52
CTSD-204ENST00000433655 WNT7BP56706 349 aa18.3■□□□□ 0.52
CTSD-204ENST00000433655 CNTN2Q02246 1040 aa18.3■□□□□ 0.52
CTSD-204ENST00000433655 ENPEPQ07075 957 aa18.3■□□□□ 0.52
CTSD-204ENST00000433655 EMC2Q15006 297 aa18.3■□□□□ 0.52
CTSD-204ENST00000433655 XKR3Q5GH77 459 aa18.3■□□□□ 0.52
CTSD-204ENST00000433655 AADACL2Q6P093 401 aa18.3■□□□□ 0.52
CTSD-204ENST00000433655 CD302Q8IX05 232 aa18.3■□□□□ 0.52
CTSD-204ENST00000433655 ZNF516Q92618 1163 aa18.3■□□□□ 0.52
CTSD-204ENST00000433655 FAM213AQ9BRX8 229 aa18.3■□□□□ 0.52
CTSD-204ENST00000433655 MAF1Q9H063 256 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms