RNA–Protein interactions for RNA: ENST00000432340.1

NUP50-209, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-209ENST00000432340 ITFG1Q8TB96 612 aa17.7■□□□□ 0.42
NUP50-209ENST00000432340 ZCCHC14Q8WYQ9 949 aaKnown RBP17.7■□□□□ 0.42
NUP50-209ENST00000432340 TRMT61BQ9BVS5 477 aaKnown RBP17.7■□□□□ 0.42
NUP50-209ENST00000432340 SUCLA2Q9P2R7 463 aaPredicted RBP17.7■□□□□ 0.42
NUP50-209ENST00000432340 FAM86B1E9PN63 330 aa17.69■□□□□ 0.42
NUP50-209ENST00000432340 FAM86B2P0C5J1 330 aa17.69■□□□□ 0.42
NUP50-209ENST00000432340 NTHL1P78549 312 aa17.69■□□□□ 0.42
NUP50-209ENST00000432340 SATB1Q01826 763 aa17.69■□□□□ 0.42
NUP50-209ENST00000432340 DSC1Q08554 894 aa17.69■□□□□ 0.42
NUP50-209ENST00000432340 NCBP1Q09161 790 aaKnown RBP17.69■□□□□ 0.42
NUP50-209ENST00000432340 FOXC1Q12948 553 aa17.69■□□□□ 0.42
NUP50-209ENST00000432340 DAB2IPQ5VWQ8 1189 aa17.69■□□□□ 0.42
NUP50-209ENST00000432340 RNF43Q68DV7 783 aa17.69■□□□□ 0.42
NUP50-209ENST00000432340 PGBD1Q96JS3 809 aa17.69■□□□□ 0.42
NUP50-209ENST00000432340 DISC1Q9NRI5 854 aa17.69■□□□□ 0.42
NUP50-209ENST00000432340 ADAM28Q9UKQ2 775 aa17.69■□□□□ 0.42
NUP50-209ENST00000432340 SF3B1O75533 1304 aaKnown RBP eCLIP17.69■□□□□ 0.42
NUP50-209ENST00000432340 DOCK8Q8NF50 2099 aa17.68■□□□□ 0.42
NUP50-209ENST00000432340 PATJQ8NI35 1801 aa17.68■□□□□ 0.42
NUP50-209ENST00000432340 CCL16O15467 120 aa17.68■□□□□ 0.42
NUP50-209ENST00000432340 CYP3A4P08684 503 aa17.68■□□□□ 0.42
NUP50-209ENST00000432340 JAK3P52333 1124 aa17.68■□□□□ 0.42
NUP50-209ENST00000432340 MLLT6P55198 1093 aaPredicted RBP17.68■□□□□ 0.42
NUP50-209ENST00000432340 PCBP1Q15365 356 aaKnown RBP eCLIP17.68■□□□□ 0.42
NUP50-209ENST00000432340 SF3A2Q15428 464 aaKnown RBP17.68■□□□□ 0.42
NUP50-209ENST00000432340 CACNA2D4Q7Z3S7 1137 aa17.68■□□□□ 0.42
NUP50-209ENST00000432340 EXOC8Q8IYI6 725 aa17.68■□□□□ 0.42
NUP50-209ENST00000432340 ZNF687Q8N1G0 1237 aa17.68■□□□□ 0.42
NUP50-209ENST00000432340 NLRP4Q96MN2 994 aa17.68■□□□□ 0.42
NUP50-209ENST00000432340 ARRDC1-AS1Q9H2J1 176 aa17.68■□□□□ 0.42
NUP50-209ENST00000432340 ZFP14Q9HCL3 533 aa17.68■□□□□ 0.42
NUP50-209ENST00000432340 ANKFY1Q9P2R3 1169 aa17.68■□□□□ 0.42
NUP50-209ENST00000432340 IGLV3-22A0A075B6J6 115 aa17.67■□□□□ 0.42
NUP50-209ENST00000432340 TAF4O00268 1085 aa17.67■□□□□ 0.42
NUP50-209ENST00000432340 TADA2AO75478 443 aa17.67■□□□□ 0.42
NUP50-209ENST00000432340 EPN2O95208 641 aa17.67■□□□□ 0.42
NUP50-209ENST00000432340 CYP21A2P08686 494 aa17.67■□□□□ 0.42
NUP50-209ENST00000432340 RBM25P49756 843 aaKnown RBP17.67■□□□□ 0.42
NUP50-209ENST00000432340 ZNF252P-AS1Q0IIN9 211 aa17.67■□□□□ 0.42
NUP50-209ENST00000432340 XKR3Q5GH77 459 aa17.67■□□□□ 0.42
NUP50-209ENST00000432340 SRGAP1Q7Z6B7 1085 aa17.67■□□□□ 0.42
NUP50-209ENST00000432340 CMTR1Q8N1G2 835 aaKnown RBP17.67■□□□□ 0.42
NUP50-209ENST00000432340 CCDC51Q96ER9 411 aa17.67■□□□□ 0.42
NUP50-209ENST00000432340 NIFKQ9BYG3 293 aaKnown RBP17.67■□□□□ 0.42
NUP50-209ENST00000432340 VPS45Q9NRW7 570 aa17.67■□□□□ 0.42
NUP50-209ENST00000432340 SEPT9Q9UHD8 586 aaPredicted RBP17.67■□□□□ 0.42
NUP50-209ENST00000432340 SLC12A7Q9Y666 1083 aa17.67■□□□□ 0.42
NUP50-209ENST00000432340 PIAS3Q9Y6X2 628 aa17.67■□□□□ 0.42
NUP50-209ENST00000432340 IGKV6-21A0A0C4DH24 114 aa17.66■□□□□ 0.42
NUP50-209ENST00000432340 SMCO2A6NFE2 343 aa17.66■□□□□ 0.42
NUP50-209ENST00000432340 ARL5CA6NH57 179 aa17.66■□□□□ 0.42
NUP50-209ENST00000432340 E7EWF7 191 aa17.66■□□□□ 0.42
NUP50-209ENST00000432340 AXIN1O15169 862 aa17.66■□□□□ 0.42
NUP50-209ENST00000432340 ZNF862O60290 1169 aa17.66■□□□□ 0.42
NUP50-209ENST00000432340 RPL17P18621 184 aaKnown RBP17.66■□□□□ 0.42
NUP50-209ENST00000432340 AFF1P51825 1210 aaKnown RBP17.66■□□□□ 0.42
NUP50-209ENST00000432340 ELAVL2Q12926 359 aaKnown RBP17.66■□□□□ 0.42
NUP50-209ENST00000432340 TARBP2Q15633 366 aaKnown RBP17.66■□□□□ 0.42
NUP50-209ENST00000432340 TMTC3Q6ZXV5 915 aa17.66■□□□□ 0.42
NUP50-209ENST00000432340 WDR5BQ86VZ2 330 aa17.66■□□□□ 0.42
NUP50-209ENST00000432340 CCDC82Q8N4S0 544 aa17.66■□□□□ 0.42
NUP50-209ENST00000432340 RDM1Q8NG50 284 aa17.66■□□□□ 0.42
NUP50-209ENST00000432340 SLC7A14Q8TBB6 771 aa17.66■□□□□ 0.42
NUP50-209ENST00000432340 TMEM87BQ96K49 555 aa17.66■□□□□ 0.42
NUP50-209ENST00000432340 GAD1Q99259 594 aa17.66■□□□□ 0.42
NUP50-209ENST00000432340 TTPALQ9BTX7 342 aa17.66■□□□□ 0.42
NUP50-209ENST00000432340 APOL6Q9BWW8 343 aa17.66■□□□□ 0.42
NUP50-209ENST00000432340 GPR62Q9BZJ7 368 aa17.66■□□□□ 0.42
NUP50-209ENST00000432340 AVENQ9NQS1 362 aaPredicted RBP17.66■□□□□ 0.42
NUP50-209ENST00000432340 hCG_1642624A0A1W2PR95 340 aa17.65■□□□□ 0.42
NUP50-209ENST00000432340 DRP2Q13474 957 aa17.65■□□□□ 0.42
NUP50-209ENST00000432340 MTERF2Q49AM1 385 aa17.65■□□□□ 0.42
NUP50-209ENST00000432340 DGKKQ5KSL6 1271 aa17.65■□□□□ 0.42
NUP50-209ENST00000432340 HEATR6Q6AI08 1181 aaKnown RBP17.65■□□□□ 0.42
NUP50-209ENST00000432340 WWC2Q6AWC2 1192 aa17.65■□□□□ 0.42
NUP50-209ENST00000432340 SYNE3Q6ZMZ3 975 aa17.65■□□□□ 0.42
NUP50-209ENST00000432340 PIK3R5Q8WYR1 880 aa17.65■□□□□ 0.42
NUP50-209ENST00000432340 GATA6Q92908 595 aa17.65■□□□□ 0.42
NUP50-209ENST00000432340 MCRS1Q96EZ8 462 aa17.65■□□□□ 0.42
NUP50-209ENST00000432340 B3GALT6Q96L58 329 aa17.65■□□□□ 0.42
NUP50-209ENST00000432340 GIT1Q9Y2X7 761 aa17.65■□□□□ 0.42
NUP50-209ENST00000432340 ERLIN2O94905 339 aa17.64■□□□□ 0.41
NUP50-209ENST00000432340 CHRNB1P11230 501 aa17.64■□□□□ 0.41
NUP50-209ENST00000432340 CEACAM1P13688 526 aa17.64■□□□□ 0.41
NUP50-209ENST00000432340 PSMC3P17980 439 aa17.64■□□□□ 0.41
NUP50-209ENST00000432340 AXLP30530 894 aa17.64■□□□□ 0.41
NUP50-209ENST00000432340 MLH1P40692 756 aa17.64■□□□□ 0.41
NUP50-209ENST00000432340 SRSF5Q13243 272 aaKnown RBP17.64■□□□□ 0.41
NUP50-209ENST00000432340 PTGDRQ13258 359 aa17.64■□□□□ 0.41
NUP50-209ENST00000432340 PSMD5Q16401 504 aa17.64■□□□□ 0.41
NUP50-209ENST00000432340 PRR16Q569H4 304 aa17.64■□□□□ 0.41
NUP50-209ENST00000432340 AXDND1Q5T1B0 1012 aaPredicted RBP17.64■□□□□ 0.41
NUP50-209ENST00000432340 FANCBQ8NB91 859 aa17.64■□□□□ 0.41
NUP50-209ENST00000432340 FAM200AQ8TCP9 573 aa17.64■□□□□ 0.41
NUP50-209ENST00000432340 DEPDC1BQ8WUY9 529 aa17.64■□□□□ 0.41
NUP50-209ENST00000432340 RUFY2Q8WXA3 655 aa17.64■□□□□ 0.41
NUP50-209ENST00000432340 ING5Q8WYH8 240 aa17.64■□□□□ 0.41
NUP50-209ENST00000432340 RIT2Q99578 217 aa17.64■□□□□ 0.41
NUP50-209ENST00000432340 TMEM121BQ9BXQ6 578 aaPredicted RBP17.64■□□□□ 0.41
NUP50-209ENST00000432340 LNPKQ9C0E8 428 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms