RNA–Protein interactions for RNA: ENST00000430982.1

PTCD1-204, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-204ENST00000430982 ARF4P18085 180 aaPredicted RBP16.76■□□□□ 0.27
PTCD1-204ENST00000430982 GUCY2CP25092 1073 aa16.76■□□□□ 0.27
PTCD1-204ENST00000430982 PEX3P56589 373 aa16.76■□□□□ 0.27
PTCD1-204ENST00000430982 CACNB1Q02641 598 aaPredicted RBP16.76■□□□□ 0.27
PTCD1-204ENST00000430982 DNM1Q05193 864 aaKnown RBP16.76■□□□□ 0.27
PTCD1-204ENST00000430982 MAPK7Q13164 816 aa16.76■□□□□ 0.27
PTCD1-204ENST00000430982 DMP1Q13316 513 aaPredicted RBP16.76■□□□□ 0.27
PTCD1-204ENST00000430982 UBXN11Q5T124 520 aa16.76■□□□□ 0.27
PTCD1-204ENST00000430982 RRAGBQ5VZM2 374 aa16.76■□□□□ 0.27
PTCD1-204ENST00000430982 ASCL5Q7RTU5 278 aa16.76■□□□□ 0.27
PTCD1-204ENST00000430982 DAW1Q8N136 415 aa16.76■□□□□ 0.27
PTCD1-204ENST00000430982 VN1R2Q8NFZ6 395 aa16.76■□□□□ 0.27
PTCD1-204ENST00000430982 HELQQ8TDG4 1101 aa16.76■□□□□ 0.27
PTCD1-204ENST00000430982 CCDC51Q96ER9 411 aa16.76■□□□□ 0.27
PTCD1-204ENST00000430982 TRAIPQ9BWF2 469 aa16.76■□□□□ 0.27
PTCD1-204ENST00000430982 ZDHHC9Q9Y397 364 aa16.76■□□□□ 0.27
PTCD1-204ENST00000430982 GVINP1Q7Z2Y8 2422 aa16.76■□□□□ 0.27
PTCD1-204ENST00000430982 SFI1A8K8P3 1242 aa16.75■□□□□ 0.27
PTCD1-204ENST00000430982 GALR2O43603 387 aaPredicted RBP16.75■□□□□ 0.27
PTCD1-204ENST00000430982 PPP6R2O75170 966 aa16.75■□□□□ 0.27
PTCD1-204ENST00000430982 KRT18P05783 430 aaKnown RBP16.75■□□□□ 0.27
PTCD1-204ENST00000430982 NBL1P41271 181 aa16.75■□□□□ 0.27
PTCD1-204ENST00000430982 NPTX2P47972 431 aa16.75■□□□□ 0.27
PTCD1-204ENST00000430982 KCNC3Q14003 757 aa16.75■□□□□ 0.27
PTCD1-204ENST00000430982 MAPK6Q16659 721 aa16.75■□□□□ 0.27
PTCD1-204ENST00000430982 CLLU1OSQ5K130 101 aa16.75■□□□□ 0.27
PTCD1-204ENST00000430982 ATL3Q6DD88 541 aa16.75■□□□□ 0.27
PTCD1-204ENST00000430982 PPP4R3CPQ6ZMV5 832 aa16.75■□□□□ 0.27
PTCD1-204ENST00000430982 CDR2LQ86X02 465 aaPredicted RBP16.75■□□□□ 0.27
PTCD1-204ENST00000430982 LARP4BQ92615 738 aaKnown RBP16.75■□□□□ 0.27
PTCD1-204ENST00000430982 PGBD4Q96DM1 585 aa16.75■□□□□ 0.27
PTCD1-204ENST00000430982 RPGRIP1Q96KN7 1286 aa16.75■□□□□ 0.27
PTCD1-204ENST00000430982 CASD1Q96PB1 797 aa16.75■□□□□ 0.27
PTCD1-204ENST00000430982 EIF2AQ9BY44 585 aaKnown RBP16.75■□□□□ 0.27
PTCD1-204ENST00000430982 PANK2Q9BZ23 570 aa16.75■□□□□ 0.27
PTCD1-204ENST00000430982 FZD8Q9H461 694 aa16.75■□□□□ 0.27
PTCD1-204ENST00000430982 KMT5AQ9NQR1 393 aa16.75■□□□□ 0.27
PTCD1-204ENST00000430982 KCND2Q9NZV8 630 aa16.75■□□□□ 0.27
PTCD1-204ENST00000430982 HCSTQ9UBK5 93 aa16.75■□□□□ 0.27
PTCD1-204ENST00000430982 CFAP45Q9UL16 551 aa16.75■□□□□ 0.27
PTCD1-204ENST00000430982 PRR23AA6NEV1 266 aa16.74■□□□□ 0.27
PTCD1-204ENST00000430982 H0Y858 1186 aa16.74■□□□□ 0.27
PTCD1-204ENST00000430982 CUTAO60888 179 aa16.74■□□□□ 0.27
PTCD1-204ENST00000430982 ZNF623O75123 536 aa16.74■□□□□ 0.27
PTCD1-204ENST00000430982 NCLP19338 710 aaKnown RBP16.74■□□□□ 0.27
PTCD1-204ENST00000430982 EFNA5P52803 228 aa16.74■□□□□ 0.27
PTCD1-204ENST00000430982 PRPF4BQ13523 1007 aaKnown RBP16.74■□□□□ 0.27
PTCD1-204ENST00000430982 FAM187BQ17R55 369 aa16.74■□□□□ 0.27
PTCD1-204ENST00000430982 ARSHQ5FYA8 562 aa16.74■□□□□ 0.27
PTCD1-204ENST00000430982 TMEM184AQ6ZMB5 413 aa16.74■□□□□ 0.27
PTCD1-204ENST00000430982 ERMP1Q7Z2K6 904 aa16.74■□□□□ 0.27
PTCD1-204ENST00000430982 LRRC43Q8N309 656 aa16.74■□□□□ 0.27
PTCD1-204ENST00000430982 KCNG4Q8TDN1 519 aa16.74■□□□□ 0.27
PTCD1-204ENST00000430982 PRIMPOLQ96LW4 560 aa16.74■□□□□ 0.27
PTCD1-204ENST00000430982 RIPOR3Q96MK2 946 aa16.74■□□□□ 0.27
PTCD1-204ENST00000430982 TRIM6Q9C030 488 aaPredicted RBP16.74■□□□□ 0.27
PTCD1-204ENST00000430982 CCDC113Q9H0I3 377 aa16.74■□□□□ 0.27
PTCD1-204ENST00000430982 TLR9Q9NR96 1032 aa16.74■□□□□ 0.27
PTCD1-204ENST00000430982 TYW1Q9NV66 732 aaKnown RBP16.74■□□□□ 0.27
PTCD1-204ENST00000430982 STK17AQ9UEE5 414 aa16.74■□□□□ 0.27
PTCD1-204ENST00000430982 INPP5FQ9Y2H2 1132 aa16.74■□□□□ 0.27
PTCD1-204ENST00000430982 USP20Q9Y2K6 914 aa16.74■□□□□ 0.27
PTCD1-204ENST00000430982 PCDHGC5Q9Y5F6 944 aa16.74■□□□□ 0.27
PTCD1-204ENST00000430982 CNTNAP2Q9UHC6 1331 aa16.73■□□□□ 0.27
PTCD1-204ENST00000430982 FSD2A1L4K1 749 aa16.73■□□□□ 0.27
PTCD1-204ENST00000430982 MEIS3P2A8K0S8 358 aa16.73■□□□□ 0.27
PTCD1-204ENST00000430982 ACKR2O00590 384 aa16.73■□□□□ 0.27
PTCD1-204ENST00000430982 FAM13AO94988 1023 aa16.73■□□□□ 0.27
PTCD1-204ENST00000430982 NPTXRO95502 500 aa16.73■□□□□ 0.27
PTCD1-204ENST00000430982 PDGFBP01127 241 aaPredicted RBP16.73■□□□□ 0.27
PTCD1-204ENST00000430982 ITGA4P13612 1032 aa16.73■□□□□ 0.27
PTCD1-204ENST00000430982 PLS3P13797 630 aa16.73■□□□□ 0.27
PTCD1-204ENST00000430982 DDIT3P35638 169 aa16.73■□□□□ 0.27
PTCD1-204ENST00000430982 STAT6P42226 847 aa16.73■□□□□ 0.27
PTCD1-204ENST00000430982 ME1P48163 572 aa16.73■□□□□ 0.27
PTCD1-204ENST00000430982 UBE3AQ05086 875 aa16.73■□□□□ 0.27
PTCD1-204ENST00000430982 DUSP6Q16828 381 aa16.73■□□□□ 0.27
PTCD1-204ENST00000430982 GLB1LQ6UWU2 654 aa16.73■□□□□ 0.27
PTCD1-204ENST00000430982 CCDC73Q6ZRK6 1079 aa16.73■□□□□ 0.27
PTCD1-204ENST00000430982 MRPL10Q7Z7H8 261 aaKnown RBP16.73■□□□□ 0.27
PTCD1-204ENST00000430982 RBM23Q86U06 439 aaKnown RBP16.73■□□□□ 0.27
PTCD1-204ENST00000430982 PDILTQ8N807 584 aa16.73■□□□□ 0.27
PTCD1-204ENST00000430982 CNNM3Q8NE01 707 aa16.73■□□□□ 0.27
PTCD1-204ENST00000430982 CDCA3Q99618 268 aaPredicted RBP16.73■□□□□ 0.27
PTCD1-204ENST00000430982 REEP2Q9BRK0 252 aa16.73■□□□□ 0.27
PTCD1-204ENST00000430982 APOL6Q9BWW8 343 aa16.73■□□□□ 0.27
PTCD1-204ENST00000430982 S1PR5Q9H228 398 aa16.73■□□□□ 0.27
PTCD1-204ENST00000430982 ZHX3Q9H4I2 956 aa16.73■□□□□ 0.27
PTCD1-204ENST00000430982 C17orf75Q9HAS0 396 aa16.73■□□□□ 0.27
PTCD1-204ENST00000430982 AAASQ9NRG9 546 aa16.73■□□□□ 0.27
PTCD1-204ENST00000430982 IPPQ9Y573 584 aa16.73■□□□□ 0.27
PTCD1-204ENST00000430982 TTLL13PA6NNM8 815 aa16.72■□□□□ 0.27
PTCD1-204ENST00000430982 K7ERI5 159 aa16.72■□□□□ 0.27
PTCD1-204ENST00000430982 N4BP3O15049 544 aa16.72■□□□□ 0.27
PTCD1-204ENST00000430982 SLC16A4O15374 487 aa16.72■□□□□ 0.27
PTCD1-204ENST00000430982 SMTNP53814 917 aa16.72■□□□□ 0.27
PTCD1-204ENST00000430982 RBM10P98175 930 aaKnown RBP16.72■□□□□ 0.27
PTCD1-204ENST00000430982 SLC27A1Q6PCB7 646 aa16.72■□□□□ 0.27
PTCD1-204ENST00000430982 AGMOQ6ZNB7 445 aa16.72■□□□□ 0.27
PTCD1-204ENST00000430982 LRRC55Q6ZSA7 311 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms