RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 ANKRD40Q6AI12 368 aa13.85□□□□□ -0.19
PTCH1-207ENST00000429896 TMEM270Q6UE05 265 aa13.85□□□□□ -0.19
PTCH1-207ENST00000429896 CXCL17Q6UXB2 119 aa13.85□□□□□ -0.19
PTCH1-207ENST00000429896 APPL2Q8NEU8 664 aa13.85□□□□□ -0.19
PTCH1-207ENST00000429896 ZNF653Q96CK0 615 aa13.85□□□□□ -0.19
PTCH1-207ENST00000429896 SPATA31C2B4DYI2 1134 aa13.85□□□□□ -0.19
PTCH1-207ENST00000429896 OR1G1P47890 313 aa13.85□□□□□ -0.19
PTCH1-207ENST00000429896 CCDC14Q49A88 953 aa13.85□□□□□ -0.19
PTCH1-207ENST00000429896 ABRAQ8N0Z2 381 aa13.85□□□□□ -0.19
PTCH1-207ENST00000429896 FBXL13Q8NEE6 735 aa13.85□□□□□ -0.19
PTCH1-207ENST00000429896 TARS2Q9BW92 718 aaKnown RBP13.85□□□□□ -0.19
PTCH1-207ENST00000429896 RIPK3Q9Y572 518 aa13.85□□□□□ -0.19
PTCH1-207ENST00000429896 CDC25BP30305 580 aa13.85□□□□□ -0.19
PTCH1-207ENST00000429896 KRT17Q04695 432 aa13.85□□□□□ -0.19
PTCH1-207ENST00000429896 DNAJC24Q6P3W2 148 aa13.85□□□□□ -0.19
PTCH1-207ENST00000429896 MAIP1Q8WWC4 291 aa13.85□□□□□ -0.19
PTCH1-207ENST00000429896 MAP2K2P36507 400 aa13.85□□□□□ -0.19
PTCH1-207ENST00000429896 EARS2Q5JPH6 523 aaKnown RBP13.85□□□□□ -0.19
PTCH1-207ENST00000429896 TOGARAM1Q9Y4F4 1720 aa13.84□□□□□ -0.19
PTCH1-207ENST00000429896 GTF2A1P52655 376 aaPredicted RBP13.84□□□□□ -0.19
PTCH1-207ENST00000429896 CEP85LQ5SZL2 805 aa13.84□□□□□ -0.19
PTCH1-207ENST00000429896 C4orf50Q6ZRC1 276 aa13.84□□□□□ -0.19
PTCH1-207ENST00000429896 UBE2Q2Q8WVN8 375 aa13.84□□□□□ -0.19
PTCH1-207ENST00000429896 HTATIP2Q9BUP3 242 aa13.84□□□□□ -0.19
PTCH1-207ENST00000429896 A0A087WZ62 844 aa13.84□□□□□ -0.19
PTCH1-207ENST00000429896 ZBED6P86452 979 aa13.84□□□□□ -0.19
PTCH1-207ENST00000429896 OSMRQ99650 979 aa13.84□□□□□ -0.19
PTCH1-207ENST00000429896 FDXACB1Q9BRP7 624 aaPredicted RBP13.84□□□□□ -0.19
PTCH1-207ENST00000429896 LOC102724159A0A0B4J2E5 919 aa13.84□□□□□ -0.19
PTCH1-207ENST00000429896 RSPH10B2B2RC85 870 aa13.84□□□□□ -0.19
PTCH1-207ENST00000429896 RSPH10BP0C881 870 aa13.84□□□□□ -0.19
PTCH1-207ENST00000429896 PWP2Q15269 919 aaKnown RBP13.84□□□□□ -0.19
PTCH1-207ENST00000429896 C17orf53Q8N3J3 647 aaPredicted RBP13.84□□□□□ -0.19
PTCH1-207ENST00000429896 TRPV2Q9Y5S1 764 aa13.84□□□□□ -0.19
PTCH1-207ENST00000429896 SERPING1P05155 500 aa13.84□□□□□ -0.19
PTCH1-207ENST00000429896 NPTX2P47972 431 aa13.84□□□□□ -0.19
PTCH1-207ENST00000429896 KIF11P52732 1056 aa13.84□□□□□ -0.19
PTCH1-207ENST00000429896 CYP27A1Q02318 531 aa13.84□□□□□ -0.19
PTCH1-207ENST00000429896 VPS52Q8N1B4 723 aa13.84□□□□□ -0.19
PTCH1-207ENST00000429896 PEX10O60683 326 aa13.84□□□□□ -0.19
PTCH1-207ENST00000429896 ALDH7A1P49419 539 aaKnown RBP13.84□□□□□ -0.19
PTCH1-207ENST00000429896 PRKCZQ05513 592 aa13.84□□□□□ -0.19
PTCH1-207ENST00000429896 CALCOCO2Q13137 446 aa13.84□□□□□ -0.19
PTCH1-207ENST00000429896 KLHL7Q8IXQ5 586 aa13.84□□□□□ -0.19
PTCH1-207ENST00000429896 ADSSL1Q8N142 457 aa13.84□□□□□ -0.19
PTCH1-207ENST00000429896 RBPJLQ9UBG7 517 aa13.84□□□□□ -0.19
PTCH1-207ENST00000429896 TJP1Q07157 1748 aa13.84□□□□□ -0.19
PTCH1-207ENST00000429896 LGALS16A8MUM7 142 aa13.83□□□□□ -0.19
PTCH1-207ENST00000429896 FOXP2O15409 715 aa13.83□□□□□ -0.19
PTCH1-207ENST00000429896 GMNNO75496 209 aa13.83□□□□□ -0.19
PTCH1-207ENST00000429896 SLITRK3O94933 977 aa13.83□□□□□ -0.19
PTCH1-207ENST00000429896 SV2CQ496J9 727 aa13.83□□□□□ -0.19
PTCH1-207ENST00000429896 ERICH1Q86X53 443 aa13.83□□□□□ -0.19
PTCH1-207ENST00000429896 CCDC26Q8TAB7 109 aa13.83□□□□□ -0.19
PTCH1-207ENST00000429896 MGARPQ8TDB4 240 aa13.83□□□□□ -0.19
PTCH1-207ENST00000429896 CEP72Q9P209 647 aa13.83□□□□□ -0.19
PTCH1-207ENST00000429896 NRCAMQ92823 1304 aa13.83□□□□□ -0.2
PTCH1-207ENST00000429896 CYP3A7-CYP3A51PA0A087WV96 503 aa13.83□□□□□ -0.2
PTCH1-207ENST00000429896 CEP104O60308 925 aa13.83□□□□□ -0.2
PTCH1-207ENST00000429896 CYP3A7P24462 503 aa13.83□□□□□ -0.2
PTCH1-207ENST00000429896 RRP1BQ14684 758 aaKnown RBP13.83□□□□□ -0.2
PTCH1-207ENST00000429896 VEPH1Q14D04 833 aa13.83□□□□□ -0.2
PTCH1-207ENST00000429896 MPZL3Q6UWV2 235 aa13.83□□□□□ -0.2
PTCH1-207ENST00000429896 ENOSF1Q7L5Y1 443 aa13.83□□□□□ -0.2
PTCH1-207ENST00000429896 IL31RAQ8NI17 732 aa13.83□□□□□ -0.2
PTCH1-207ENST00000429896 TNIP3Q96KP6 325 aa13.83□□□□□ -0.2
PTCH1-207ENST00000429896 YME1L1Q96TA2 773 aa13.83□□□□□ -0.2
PTCH1-207ENST00000429896 COLEC11Q9BWP8 271 aa13.83□□□□□ -0.2
PTCH1-207ENST00000429896 STMN4Q9H169 189 aaPredicted RBP13.83□□□□□ -0.2
PTCH1-207ENST00000429896 MRPL47Q9HD33 250 aaKnown RBP13.83□□□□□ -0.2
PTCH1-207ENST00000429896 PHF20L1A8MW92 1017 aa13.83□□□□□ -0.2
PTCH1-207ENST00000429896 MYO1FO00160 1098 aa13.83□□□□□ -0.2
PTCH1-207ENST00000429896 DPYSL4O14531 572 aa13.83□□□□□ -0.2
PTCH1-207ENST00000429896 SMIM10L2AP0DMW4 78 aa13.83□□□□□ -0.2
PTCH1-207ENST00000429896 SMIM10L2BP0DMW5 78 aa13.83□□□□□ -0.2
PTCH1-207ENST00000429896 ST3GAL1Q11201 340 aa13.83□□□□□ -0.2
PTCH1-207ENST00000429896 STK4Q13043 487 aa13.83□□□□□ -0.2
PTCH1-207ENST00000429896 TEPSINQ96N21 525 aa13.83□□□□□ -0.2
PTCH1-207ENST00000429896 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.83□□□□□ -0.2
PTCH1-207ENST00000429896 MROH7Q68CQ1 1323 aa13.83□□□□□ -0.2
PTCH1-207ENST00000429896 RIOK3O14730 519 aaKnown RBP13.83□□□□□ -0.2
PTCH1-207ENST00000429896 GUCY2CP25092 1073 aa13.83□□□□□ -0.2
PTCH1-207ENST00000429896 MAP7D3Q8IWC1 876 aa13.83□□□□□ -0.2
PTCH1-207ENST00000429896 CCDC110Q8TBZ0 833 aa13.83□□□□□ -0.2
PTCH1-207ENST00000429896 CTCFP49711 727 aaPredicted RBP13.83□□□□□ -0.2
PTCH1-207ENST00000429896 ITIH3Q06033 890 aa13.83□□□□□ -0.2
PTCH1-207ENST00000429896 ZNF410Q86VK4 478 aa13.83□□□□□ -0.2
PTCH1-207ENST00000429896 MTRF1LQ9UGC7 380 aaKnown RBP13.83□□□□□ -0.2
PTCH1-207ENST00000429896 ADORA2BP29275 332 aa13.82□□□□□ -0.2
PTCH1-207ENST00000429896 RAB27AP51159 221 aa13.82□□□□□ -0.2
PTCH1-207ENST00000429896 GIT2Q14161 759 aa13.82□□□□□ -0.2
PTCH1-207ENST00000429896 PTPN21Q16825 1174 aa13.82□□□□□ -0.2
PTCH1-207ENST00000429896 DUSP28Q4G0W2 176 aa13.82□□□□□ -0.2
PTCH1-207ENST00000429896 ZNF365Q70YC5 407 aa13.82□□□□□ -0.2
PTCH1-207ENST00000429896 TRAPPC12Q8WVT3 735 aa13.82□□□□□ -0.2
PTCH1-207ENST00000429896 CPB2Q96IY4 423 aa13.82□□□□□ -0.2
PTCH1-207ENST00000429896 MAML3Q96JK9 1138 aa13.82□□□□□ -0.2
PTCH1-207ENST00000429896 NUP98P52948 1817 aa13.82□□□□□ -0.2
PTCH1-207ENST00000429896 SPEF2Q9C093 1822 aa13.82□□□□□ -0.2
PTCH1-207ENST00000429896 GPR25O00155 361 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms