RNA–Protein interactions for RNA: ENST00000428966.1

PABPC1P11-201, Transcript of poly(A) binding protein cytoplasmic 1 pseudogene 11, humanhuman

BASIC

Gene PABPC1P11, Length 2,007 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1P11-201ENST00000428966 PEX3P56589 373 aa12.74□□□□□ -0.37
PABPC1P11-201ENST00000428966 FANCCQ00597 558 aa12.74□□□□□ -0.37
PABPC1P11-201ENST00000428966 GRIN2CQ14957 1233 aa12.74□□□□□ -0.37
PABPC1P11-201ENST00000428966 RRAGBQ5VZM2 374 aa12.74□□□□□ -0.37
PABPC1P11-201ENST00000428966 RESP18Q5W5W9 173 aa12.74□□□□□ -0.37
PABPC1P11-201ENST00000428966 TWF2Q6IBS0 349 aaKnown RBP12.74□□□□□ -0.37
PABPC1P11-201ENST00000428966 ZNF397Q8NF99 534 aaPredicted RBP12.74□□□□□ -0.37
PABPC1P11-201ENST00000428966 DRC1Q96MC2 740 aa12.74□□□□□ -0.37
PABPC1P11-201ENST00000428966 GUCD1Q96NT3 240 aa12.74□□□□□ -0.37
PABPC1P11-201ENST00000428966 TRAIPQ9BWF2 469 aa12.74□□□□□ -0.37
PABPC1P11-201ENST00000428966 CCDC113Q9H0I3 377 aa12.74□□□□□ -0.37
PABPC1P11-201ENST00000428966 FZD8Q9H461 694 aa12.74□□□□□ -0.37
PABPC1P11-201ENST00000428966 CERS4Q9HA82 394 aa12.74□□□□□ -0.37
PABPC1P11-201ENST00000428966 SPTBN5Q9NRC6 3674 aaKnown RBP12.74□□□□□ -0.37
PABPC1P11-201ENST00000428966 STK17AQ9UEE5 414 aa12.74□□□□□ -0.37
PABPC1P11-201ENST00000428966 PRDM4Q9UKN5 801 aa12.74□□□□□ -0.37
PABPC1P11-201ENST00000428966 USP20Q9Y2K6 914 aa12.74□□□□□ -0.37
PABPC1P11-201ENST00000428966 BIN1O00499 593 aa12.73□□□□□ -0.37
PABPC1P11-201ENST00000428966 FGFR1P11362 822 aa12.73□□□□□ -0.37
PABPC1P11-201ENST00000428966 ARF4P18085 180 aaPredicted RBP12.73□□□□□ -0.37
PABPC1P11-201ENST00000428966 MYL5Q02045 173 aa12.73□□□□□ -0.37
PABPC1P11-201ENST00000428966 PPP2R5AQ15172 486 aa12.73□□□□□ -0.37
PABPC1P11-201ENST00000428966 PCBP1Q15365 356 aaKnown RBP eCLIP12.73□□□□□ -0.37
PABPC1P11-201ENST00000428966 E2F4Q16254 413 aa12.73□□□□□ -0.37
PABPC1P11-201ENST00000428966 ZNF598Q86UK7 904 aaKnown RBP12.73□□□□□ -0.37
PABPC1P11-201ENST00000428966 ECHDC2Q86YB7 292 aa12.73□□□□□ -0.37
PABPC1P11-201ENST00000428966 CPB2Q96IY4 423 aa12.73□□□□□ -0.37
PABPC1P11-201ENST00000428966 IFT74Q96LB3 600 aa12.73□□□□□ -0.37
PABPC1P11-201ENST00000428966 TIPINQ9BVW5 301 aa12.73□□□□□ -0.37
PABPC1P11-201ENST00000428966 TMEM161AQ9NX61 479 aa12.73□□□□□ -0.37
PABPC1P11-201ENST00000428966 PCDHB7Q9Y5E2 793 aa12.73□□□□□ -0.37
PABPC1P11-201ENST00000428966 GBF1Q92538 1859 aa12.73□□□□□ -0.37
PABPC1P11-201ENST00000428966 CCDC169A6NNP5 214 aa12.72□□□□□ -0.37
PABPC1P11-201ENST00000428966 MEIS3P2A8K0S8 358 aa12.72□□□□□ -0.37
PABPC1P11-201ENST00000428966 GTPBP6O43824 516 aaPredicted RBP12.72□□□□□ -0.37
PABPC1P11-201ENST00000428966 LINC00271P0C7V0 271 aa12.72□□□□□ -0.37
PABPC1P11-201ENST00000428966 STAT6P42226 847 aa12.72□□□□□ -0.37
PABPC1P11-201ENST00000428966 DMP1Q13316 513 aaPredicted RBP12.72□□□□□ -0.37
PABPC1P11-201ENST00000428966 GIT2Q14161 759 aa12.72□□□□□ -0.37
PABPC1P11-201ENST00000428966 UBXN11Q5T124 520 aa12.72□□□□□ -0.37
PABPC1P11-201ENST00000428966 CDR2LQ86X02 465 aaPredicted RBP12.72□□□□□ -0.37
PABPC1P11-201ENST00000428966 DEPTORQ8TB45 409 aa12.72□□□□□ -0.37
PABPC1P11-201ENST00000428966 ELAC1Q9H777 363 aaKnown RBP12.72□□□□□ -0.37
PABPC1P11-201ENST00000428966 FAM105AQ9NUU6 356 aa12.72□□□□□ -0.37
PABPC1P11-201ENST00000428966 ARHGAP28Q9P2N2 729 aa12.72□□□□□ -0.37
PABPC1P11-201ENST00000428966 MTUS1Q9ULD2 1270 aa12.72□□□□□ -0.37
PABPC1P11-201ENST00000428966 LRFN2Q9ULH4 789 aa12.72□□□□□ -0.37
PABPC1P11-201ENST00000428966 FARP1Q9Y4F1 1045 aaPredicted RBP12.72□□□□□ -0.37
PABPC1P11-201ENST00000428966 UNC80Q8N2C7 3258 aa12.72□□□□□ -0.37
PABPC1P11-201ENST00000428966 EPOPA6NHQ4 379 aa12.72□□□□□ -0.37
PABPC1P11-201ENST00000428966 STAG3L1P0CL83 205 aa12.72□□□□□ -0.37
PABPC1P11-201ENST00000428966 PLS3P13797 630 aa12.72□□□□□ -0.37
PABPC1P11-201ENST00000428966 LONRF3Q496Y0 759 aa12.72□□□□□ -0.37
PABPC1P11-201ENST00000428966 ARMCX5Q6P1M9 558 aa12.72□□□□□ -0.37
PABPC1P11-201ENST00000428966 TAS1R3Q7RTX0 852 aa12.72□□□□□ -0.37
PABPC1P11-201ENST00000428966 ZBTB8OSQ8IWT0 167 aa12.72□□□□□ -0.37
PABPC1P11-201ENST00000428966 RNF169Q8NCN4 708 aa12.72□□□□□ -0.37
PABPC1P11-201ENST00000428966 PPP1R13BQ96KQ4 1090 aa12.72□□□□□ -0.37
PABPC1P11-201ENST00000428966 NTPCRQ9BSD7 190 aaKnown RBP12.72□□□□□ -0.37
PABPC1P11-201ENST00000428966 C2orf40Q9H1Z8 148 aa12.72□□□□□ -0.37
PABPC1P11-201ENST00000428966 C17orf75Q9HAS0 396 aa12.72□□□□□ -0.37
PABPC1P11-201ENST00000428966 RNF19AQ9NV58 838 aa12.72□□□□□ -0.37
PABPC1P11-201ENST00000428966 ODF2LQ9ULJ1 636 aa12.72□□□□□ -0.37
PABPC1P11-201ENST00000428966 VCANP13611 3396 aa12.71□□□□□ -0.37
PABPC1P11-201ENST00000428966 A0A1B0GUA9 196 aa12.71□□□□□ -0.37
PABPC1P11-201ENST00000428966 MYMKA6NI61 221 aa12.71□□□□□ -0.37
PABPC1P11-201ENST00000428966 SLC16A4O15374 487 aa12.71□□□□□ -0.37
PABPC1P11-201ENST00000428966 SERPINC1P01008 464 aa12.71□□□□□ -0.37
PABPC1P11-201ENST00000428966 ZNF131P52739 623 aa12.71□□□□□ -0.37
PABPC1P11-201ENST00000428966 UBASH3AP57075 661 aa12.71□□□□□ -0.37
PABPC1P11-201ENST00000428966 MAPK6Q16659 721 aa12.71□□□□□ -0.37
PABPC1P11-201ENST00000428966 FAM187BQ17R55 369 aa12.71□□□□□ -0.37
PABPC1P11-201ENST00000428966 PAN2Q504Q3 1202 aaKnown RBP12.71□□□□□ -0.37
PABPC1P11-201ENST00000428966 E4F1Q66K89 784 aaPredicted RBP12.71□□□□□ -0.37
PABPC1P11-201ENST00000428966 NOTUMQ6P988 496 aa12.71□□□□□ -0.37
PABPC1P11-201ENST00000428966 DYMQ7RTS9 669 aa12.71□□□□□ -0.37
PABPC1P11-201ENST00000428966 STAMQ92783 540 aa12.71□□□□□ -0.37
PABPC1P11-201ENST00000428966 LPPQ93052 612 aa12.71□□□□□ -0.37
PABPC1P11-201ENST00000428966 CDX2Q99626 313 aaPredicted RBP12.71□□□□□ -0.37
PABPC1P11-201ENST00000428966 C17orf80Q9BSJ5 609 aa12.71□□□□□ -0.37
PABPC1P11-201ENST00000428966 EIF2AQ9BY44 585 aaKnown RBP12.71□□□□□ -0.37
PABPC1P11-201ENST00000428966 PRDM12Q9H4Q4 367 aa12.71□□□□□ -0.37
PABPC1P11-201ENST00000428966 L2HGDHQ9H9P8 463 aa12.71□□□□□ -0.37
PABPC1P11-201ENST00000428966 KMT5AQ9NQR1 393 aa12.71□□□□□ -0.37
PABPC1P11-201ENST00000428966 PRMT7Q9NVM4 692 aaPredicted RBP12.71□□□□□ -0.37
PABPC1P11-201ENST00000428966 HCSTQ9UBK5 93 aa12.71□□□□□ -0.37
PABPC1P11-201ENST00000428966 DACH1Q9UI36 760 aa12.71□□□□□ -0.37
PABPC1P11-201ENST00000428966 PCDHB2Q9Y5E7 798 aa12.71□□□□□ -0.37
PABPC1P11-201ENST00000428966 CNTNAP2Q9UHC6 1331 aa12.71□□□□□ -0.37
PABPC1P11-201ENST00000428966 ACKR2O00590 384 aa12.71□□□□□ -0.38
PABPC1P11-201ENST00000428966 POLR2DO15514 142 aaKnown RBP12.71□□□□□ -0.38
PABPC1P11-201ENST00000428966 ZNF623O75123 536 aa12.71□□□□□ -0.38
PABPC1P11-201ENST00000428966 PRKCBP05771 671 aa12.71□□□□□ -0.38
PABPC1P11-201ENST00000428966 AXLP30530 894 aa12.71□□□□□ -0.38
PABPC1P11-201ENST00000428966 EFNA5P52803 228 aa12.71□□□□□ -0.38
PABPC1P11-201ENST00000428966 BTG3Q14201 252 aaPredicted RBP12.71□□□□□ -0.38
PABPC1P11-201ENST00000428966 CLLU1OSQ5K130 101 aa12.71□□□□□ -0.38
PABPC1P11-201ENST00000428966 KRBA2Q6ZNG9 492 aa12.71□□□□□ -0.38
PABPC1P11-201ENST00000428966 SV2BQ7L1I2 683 aa12.71□□□□□ -0.38
PABPC1P11-201ENST00000428966 TMEM161BQ8NDZ6 487 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms