RNA–Protein interactions for RNA: ENST00000428021.1

VRK2-204, Transcript of vaccinia related kinase 2, humanhuman

TSL 4

Gene VRK2, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-204ENST00000428021 COG5Q9UP83 839 aa18.36■□□□□ 0.53
VRK2-204ENST00000428021 TNFSF13BQ9Y275 285 aa18.36■□□□□ 0.53
VRK2-204ENST00000428021 ZMYM2Q9UBW7 1377 aa18.35■□□□□ 0.53
VRK2-204ENST00000428021 ABLIM1O14639 778 aa18.35■□□□□ 0.53
VRK2-204ENST00000428021 CUTAO60888 179 aa18.35■□□□□ 0.53
VRK2-204ENST00000428021 GTF2F1P35269 517 aaKnown RBP eCLIP18.35■□□□□ 0.53
VRK2-204ENST00000428021 SLC11A1P49279 550 aa18.35■□□□□ 0.53
VRK2-204ENST00000428021 SCNN1GP51170 649 aa18.35■□□□□ 0.53
VRK2-204ENST00000428021 SMTNP53814 917 aa18.35■□□□□ 0.53
VRK2-204ENST00000428021 NCKAP1LP55160 1127 aa18.35■□□□□ 0.53
VRK2-204ENST00000428021 HYAL1Q12794 435 aa18.35■□□□□ 0.53
VRK2-204ENST00000428021 SHC4Q6S5L8 630 aa18.35■□□□□ 0.53
VRK2-204ENST00000428021 FIZ1Q96SL8 496 aa18.35■□□□□ 0.53
VRK2-204ENST00000428021 ADPGKQ9BRR6 497 aa18.35■□□□□ 0.53
VRK2-204ENST00000428021 TARS2Q9BW92 718 aaKnown RBP18.35■□□□□ 0.53
VRK2-204ENST00000428021 MRPL4Q9BYD3 311 aaKnown RBP18.35■□□□□ 0.53
VRK2-204ENST00000428021 CXCL16Q9H2A7 254 aa18.35■□□□□ 0.53
VRK2-204ENST00000428021 TLR9Q9NR96 1032 aa18.35■□□□□ 0.53
VRK2-204ENST00000428021 SNTG2Q9NY99 539 aa18.35■□□□□ 0.53
VRK2-204ENST00000428021 KLK14Q9P0G3 267 aa18.35■□□□□ 0.53
VRK2-204ENST00000428021 LARSQ9P2J5 1176 aaKnown RBP18.35■□□□□ 0.53
VRK2-204ENST00000428021 PARP2Q9UGN5 583 aa18.35■□□□□ 0.53
VRK2-204ENST00000428021 RCOR1Q9UKL0 485 aa18.35■□□□□ 0.53
VRK2-204ENST00000428021 TDRD15B5MCY1 1934 aaKnown RBP18.35■□□□□ 0.53
VRK2-204ENST00000428021 MYMKA6NI61 221 aa18.34■□□□□ 0.53
VRK2-204ENST00000428021 FAM13AO94988 1023 aa18.34■□□□□ 0.53
VRK2-204ENST00000428021 PROZP22891 400 aa18.34■□□□□ 0.53
VRK2-204ENST00000428021 MRPS5P82675 430 aaKnown RBP18.34■□□□□ 0.53
VRK2-204ENST00000428021 DSC1Q08554 894 aa18.34■□□□□ 0.53
VRK2-204ENST00000428021 BECN1Q14457 450 aa18.34■□□□□ 0.53
VRK2-204ENST00000428021 DCAF4L1Q3SXM0 396 aa18.34■□□□□ 0.53
VRK2-204ENST00000428021 CCDC73Q6ZRK6 1079 aa18.34■□□□□ 0.53
VRK2-204ENST00000428021 COLGALT2Q8IYK4 626 aa18.34■□□□□ 0.53
VRK2-204ENST00000428021 KCNG4Q8TDN1 519 aa18.34■□□□□ 0.53
VRK2-204ENST00000428021 IGSF21Q96ID5 467 aa18.34■□□□□ 0.53
VRK2-204ENST00000428021 CHAMP1Q96JM3 812 aa18.34■□□□□ 0.53
VRK2-204ENST00000428021 ASB2Q96Q27 587 aa18.34■□□□□ 0.53
VRK2-204ENST00000428021 TMEM175Q9BSA9 504 aa18.34■□□□□ 0.53
VRK2-204ENST00000428021 UBE2ZQ9H832 354 aaPredicted RBP18.34■□□□□ 0.53
VRK2-204ENST00000428021 PARVGQ9HBI0 331 aa18.34■□□□□ 0.53
VRK2-204ENST00000428021 PUF60Q9UHX1 559 aaKnown RBP18.34■□□□□ 0.53
VRK2-204ENST00000428021 PCDHA7Q9UN72 937 aa18.34■□□□□ 0.53
VRK2-204ENST00000428021 RECQL4O94761 1208 aa18.33■□□□□ 0.52
VRK2-204ENST00000428021 KRT18P05783 430 aaKnown RBP18.33■□□□□ 0.52
VRK2-204ENST00000428021 KRT17Q04695 432 aa18.33■□□□□ 0.52
VRK2-204ENST00000428021 CTC1Q2NKJ3 1217 aa18.33■□□□□ 0.52
VRK2-204ENST00000428021 SV2BQ7L1I2 683 aa18.33■□□□□ 0.52
VRK2-204ENST00000428021 HAUS6Q7Z4H7 955 aa18.33■□□□□ 0.52
VRK2-204ENST00000428021 MYCT1Q8N699 235 aa18.33■□□□□ 0.52
VRK2-204ENST00000428021 PDILTQ8N807 584 aa18.33■□□□□ 0.52
VRK2-204ENST00000428021 DNAJC19Q96DA6 116 aa18.33■□□□□ 0.52
VRK2-204ENST00000428021 PABPC5Q96DU9 382 aaKnown RBP18.33■□□□□ 0.52
VRK2-204ENST00000428021 ZBTB45Q96K62 511 aaPredicted RBP18.33■□□□□ 0.52
VRK2-204ENST00000428021 VN1R3Q9BXE9 311 aa18.33■□□□□ 0.52
VRK2-204ENST00000428021 CDT1Q9H211 546 aa18.33■□□□□ 0.52
VRK2-204ENST00000428021 CFAP45Q9UL16 551 aa18.33■□□□□ 0.52
VRK2-204ENST00000428021 CARNS1A5YM72 827 aa18.32■□□□□ 0.52
VRK2-204ENST00000428021 PTGESO14684 152 aa18.32■□□□□ 0.52
VRK2-204ENST00000428021 NRP1O14786 923 aa18.32■□□□□ 0.52
VRK2-204ENST00000428021 TRAK2O60296 914 aa18.32■□□□□ 0.52
VRK2-204ENST00000428021 ALDH2P05091 517 aa18.32■□□□□ 0.52
VRK2-204ENST00000428021 LTBRP36941 435 aa18.32■□□□□ 0.52
VRK2-204ENST00000428021 STAT6P42226 847 aa18.32■□□□□ 0.52
VRK2-204ENST00000428021 STRN3Q13033 797 aa18.32■□□□□ 0.52
VRK2-204ENST00000428021 E2F4Q16254 413 aa18.32■□□□□ 0.52
VRK2-204ENST00000428021 PDE12Q6L8Q7 609 aaKnown RBP18.32■□□□□ 0.52
VRK2-204ENST00000428021 DYMQ7RTS9 669 aa18.32■□□□□ 0.52
VRK2-204ENST00000428021 CEP120Q8N960 986 aa18.32■□□□□ 0.52
VRK2-204ENST00000428021 MICAL1Q8TDZ2 1067 aa18.32■□□□□ 0.52
VRK2-204ENST00000428021 DDX12PQ92771 950 aa18.32■□□□□ 0.52
VRK2-204ENST00000428021 TMEM169Q96HH4 297 aa18.32■□□□□ 0.52
VRK2-204ENST00000428021 FAM193BQ96PV7 902 aaPredicted RBP18.32■□□□□ 0.52
VRK2-204ENST00000428021 GDAQ9Y2T3 454 aa18.32■□□□□ 0.52
VRK2-204ENST00000428021 TRIP11Q15643 1979 aa18.31■□□□□ 0.52
VRK2-204ENST00000428021 HIDE1A8MVS5 230 aa18.31■□□□□ 0.52
VRK2-204ENST00000428021 H0YCG3 227 aa18.31■□□□□ 0.52
VRK2-204ENST00000428021 TBCAO75347 108 aaKnown RBP18.31■□□□□ 0.52
VRK2-204ENST00000428021 KCNQ1P51787 676 aa18.31■□□□□ 0.52
VRK2-204ENST00000428021 GRIK3Q13003 919 aa18.31■□□□□ 0.52
VRK2-204ENST00000428021 ZNF568Q3ZCX4 644 aa18.31■□□□□ 0.52
VRK2-204ENST00000428021 TJAP1Q5JTD0 557 aa18.31■□□□□ 0.52
VRK2-204ENST00000428021 PLPP4Q5VZY2 271 aa18.31■□□□□ 0.52
VRK2-204ENST00000428021 MPZL3Q6UWV2 235 aa18.31■□□□□ 0.52
VRK2-204ENST00000428021 ZPBP2Q6X784 338 aa18.31■□□□□ 0.52
VRK2-204ENST00000428021 DDX53Q86TM3 631 aaKnown RBP18.31■□□□□ 0.52
VRK2-204ENST00000428021 TCF25Q9BQ70 676 aa18.31■□□□□ 0.52
VRK2-204ENST00000428021 ZHX3Q9H4I2 956 aa18.31■□□□□ 0.52
VRK2-204ENST00000428021 IGFLR1Q9H665 355 aa18.31■□□□□ 0.52
VRK2-204ENST00000428021 NGRNQ9NPE2 291 aaKnown RBP18.31■□□□□ 0.52
VRK2-204ENST00000428021 MARCH5Q9NX47 278 aa18.31■□□□□ 0.52
VRK2-204ENST00000428021 FAN1Q9Y2M0 1017 aa18.31■□□□□ 0.52
VRK2-204ENST00000428021 TCHHQ07283 1943 aa18.31■□□□□ 0.52
VRK2-204ENST00000428021 PER2O15055 1255 aa18.3■□□□□ 0.52
VRK2-204ENST00000428021 LINC01565O15544 149 aa18.3■□□□□ 0.52
VRK2-204ENST00000428021 NCK2O43639 380 aa18.3■□□□□ 0.52
VRK2-204ENST00000428021 TOM1L1O75674 476 aa18.3■□□□□ 0.52
VRK2-204ENST00000428021 EFEMP2O95967 443 aa18.3■□□□□ 0.52
VRK2-204ENST00000428021 MCF2P10911 925 aa18.3■□□□□ 0.52
VRK2-204ENST00000428021 BMP1P13497 986 aa18.3■□□□□ 0.52
VRK2-204ENST00000428021 KCNA5P22460 613 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms