RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 KRT12Q99456 494 aa11.4□□□□□ -0.58
TCOF1-204ENST00000427724 AGAP1Q9UPQ3 857 aa11.4□□□□□ -0.58
TCOF1-204ENST00000427724 LTBP3Q9NS15 1303 aa11.4□□□□□ -0.58
TCOF1-204ENST00000427724 CABYRO75952 493 aa11.4□□□□□ -0.58
TCOF1-204ENST00000427724 SP100P23497 879 aaPredicted RBP11.4□□□□□ -0.58
TCOF1-204ENST00000427724 NMT1P30419 496 aaKnown RBP11.4□□□□□ -0.58
TCOF1-204ENST00000427724 OAZ1P54368 228 aa11.4□□□□□ -0.58
TCOF1-204ENST00000427724 MDM2Q00987 491 aaPredicted RBP11.4□□□□□ -0.58
TCOF1-204ENST00000427724 ACTN3Q08043 901 aaPredicted RBP11.4□□□□□ -0.58
TCOF1-204ENST00000427724 MAN2A1Q16706 1144 aa11.4□□□□□ -0.58
TCOF1-204ENST00000427724 ZNF512Q96ME7 567 aaPredicted RBP11.4□□□□□ -0.58
TCOF1-204ENST00000427724 IL17RBQ9NRM6 502 aa11.4□□□□□ -0.58
TCOF1-204ENST00000427724 TXNDC16Q9P2K2 825 aa11.4□□□□□ -0.58
TCOF1-204ENST00000427724 FNDC3AQ9Y2H6 1198 aaKnown RBP11.4□□□□□ -0.58
TCOF1-204ENST00000427724 BPIFB4P59827 614 aa11.4□□□□□ -0.59
TCOF1-204ENST00000427724 SLC20A2Q08357 652 aa11.4□□□□□ -0.59
TCOF1-204ENST00000427724 PDCLQ13371 301 aa11.4□□□□□ -0.59
TCOF1-204ENST00000427724 DAAM2Q86T65 1068 aa11.4□□□□□ -0.59
TCOF1-204ENST00000427724 CCDC170Q8IYT3 715 aa11.4□□□□□ -0.59
TCOF1-204ENST00000427724 TARS2Q9BW92 718 aaKnown RBP11.4□□□□□ -0.59
TCOF1-204ENST00000427724 EPB41L5Q9HCM4 733 aa11.4□□□□□ -0.59
TCOF1-204ENST00000427724 HAUS2Q9NVX0 235 aa11.4□□□□□ -0.59
TCOF1-204ENST00000427724 PCDHA13Q9Y5I0 950 aa11.4□□□□□ -0.59
TCOF1-204ENST00000427724 SNCAIPQ9Y6H5 919 aa11.4□□□□□ -0.59
TCOF1-204ENST00000427724 ABCC6O95255 1503 aa11.4□□□□□ -0.59
TCOF1-204ENST00000427724 TCRBV5S4A2TA0A5A2 114 aa11.39□□□□□ -0.59
TCOF1-204ENST00000427724 AMHP03971 560 aa11.39□□□□□ -0.59
TCOF1-204ENST00000427724 ZNF18P17022 549 aa11.39□□□□□ -0.59
TCOF1-204ENST00000427724 WDR72Q3MJ13 1102 aa11.39□□□□□ -0.59
TCOF1-204ENST00000427724 PPP1R21Q6ZMI0 780 aa11.39□□□□□ -0.59
TCOF1-204ENST00000427724 SAPCD2Q86UD0 394 aa11.39□□□□□ -0.59
TCOF1-204ENST00000427724 COLEC11Q9BWP8 271 aa11.39□□□□□ -0.59
TCOF1-204ENST00000427724 UBE2TQ9NPD8 197 aaPredicted RBP11.39□□□□□ -0.59
TCOF1-204ENST00000427724 RASAL2Q9UJF2 1139 aa11.39□□□□□ -0.59
TCOF1-204ENST00000427724 PPP1R3GB7ZBB8 358 aa11.39□□□□□ -0.59
TCOF1-204ENST00000427724 H3BQF6 201 aa11.39□□□□□ -0.59
TCOF1-204ENST00000427724 URODP06132 367 aa11.39□□□□□ -0.59
TCOF1-204ENST00000427724 GRIK4Q16099 956 aa11.39□□□□□ -0.59
TCOF1-204ENST00000427724 FBXL16Q8N461 479 aa11.39□□□□□ -0.59
TCOF1-204ENST00000427724 ZNF296Q8WUU4 475 aaPredicted RBP11.39□□□□□ -0.59
TCOF1-204ENST00000427724 FUT8Q9BYC5 575 aa11.39□□□□□ -0.59
TCOF1-204ENST00000427724 CERS4Q9HA82 394 aa11.39□□□□□ -0.59
TCOF1-204ENST00000427724 AGPAT5Q9NUQ2 364 aa11.39□□□□□ -0.59
TCOF1-204ENST00000427724 PRMT7Q9NVM4 692 aaPredicted RBP11.39□□□□□ -0.59
TCOF1-204ENST00000427724 LIMA1Q9UHB6 759 aaKnown RBP11.39□□□□□ -0.59
TCOF1-204ENST00000427724 SUFUQ9UMX1 484 aa11.39□□□□□ -0.59
TCOF1-204ENST00000427724 ZNF185O15231 689 aa11.39□□□□□ -0.59
TCOF1-204ENST00000427724 HOXA2O43364 376 aa11.39□□□□□ -0.59
TCOF1-204ENST00000427724 STK10O94804 968 aaKnown RBP11.39□□□□□ -0.59
TCOF1-204ENST00000427724 HEXIM1O94992 359 aaKnown RBP11.39□□□□□ -0.59
TCOF1-204ENST00000427724 EYA4O95677 639 aa11.39□□□□□ -0.59
TCOF1-204ENST00000427724 RECQLP46063 649 aaPredicted RBP11.39□□□□□ -0.59
TCOF1-204ENST00000427724 PPP1R7Q15435 360 aa11.39□□□□□ -0.59
TCOF1-204ENST00000427724 ZNF484Q5JVG2 852 aa11.39□□□□□ -0.59
TCOF1-204ENST00000427724 ZNF746Q6NUN9 644 aaPredicted RBP11.39□□□□□ -0.59
TCOF1-204ENST00000427724 CCDC26Q8TAB7 109 aa11.39□□□□□ -0.59
TCOF1-204ENST00000427724 HASPINQ8TF76 798 aa11.39□□□□□ -0.59
TCOF1-204ENST00000427724 IQCDQ96DY2 449 aa11.39□□□□□ -0.59
TCOF1-204ENST00000427724 ZNF560Q96MR9 790 aa11.39□□□□□ -0.59
TCOF1-204ENST00000427724 PAIP2Q9BPZ3 127 aaKnown RBP11.39□□□□□ -0.59
TCOF1-204ENST00000427724 ZMYND12Q9H0C1 365 aa11.39□□□□□ -0.59
TCOF1-204ENST00000427724 HIPK3Q9H422 1215 aa11.39□□□□□ -0.59
TCOF1-204ENST00000427724 GEMIN8Q9NWZ8 242 aaKnown RBP11.39□□□□□ -0.59
TCOF1-204ENST00000427724 MOSPD1Q9UJG1 213 aa11.39□□□□□ -0.59
TCOF1-204ENST00000427724 SLC4A7Q9Y6M7 1214 aa11.39□□□□□ -0.59
TCOF1-204ENST00000427724 CEP290O15078 2479 aa11.39□□□□□ -0.59
TCOF1-204ENST00000427724 URB1O60287 2271 aaKnown RBP11.39□□□□□ -0.59
TCOF1-204ENST00000427724 SASH3O75995 380 aa11.38□□□□□ -0.59
TCOF1-204ENST00000427724 BMP6P22004 513 aa11.38□□□□□ -0.59
TCOF1-204ENST00000427724 ADORA2BP29275 332 aa11.38□□□□□ -0.59
TCOF1-204ENST00000427724 GGCXP38435 758 aa11.38□□□□□ -0.59
TCOF1-204ENST00000427724 PSMC6P62333 389 aa11.38□□□□□ -0.59
TCOF1-204ENST00000427724 NAA35Q5VZE5 725 aa11.38□□□□□ -0.59
TCOF1-204ENST00000427724 TAF2Q6P1X5 1199 aa11.38□□□□□ -0.59
TCOF1-204ENST00000427724 NUCKS1Q9H1E3 243 aaKnown RBP11.38□□□□□ -0.59
TCOF1-204ENST00000427724 SRRDQ9UH36 339 aa11.38□□□□□ -0.59
TCOF1-204ENST00000427724 AHDC1Q5TGY3 1603 aaPredicted RBP11.38□□□□□ -0.59
TCOF1-204ENST00000427724 CNTNAP5Q8WYK1 1306 aa11.38□□□□□ -0.59
TCOF1-204ENST00000427724 A0A087WZ62 844 aa11.38□□□□□ -0.59
TCOF1-204ENST00000427724 NEMP1O14524 444 aa11.38□□□□□ -0.59
TCOF1-204ENST00000427724 MSH4O15457 936 aa11.38□□□□□ -0.59
TCOF1-204ENST00000427724 SLC4A1P02730 911 aa11.38□□□□□ -0.59
TCOF1-204ENST00000427724 LRG1P02750 347 aa11.38□□□□□ -0.59
TCOF1-204ENST00000427724 VIMP08670 466 aaKnown RBP11.38□□□□□ -0.59
TCOF1-204ENST00000427724 PDGFRBP09619 1106 aa11.38□□□□□ -0.59
TCOF1-204ENST00000427724 FGFR4P22455 802 aa11.38□□□□□ -0.59
TCOF1-204ENST00000427724 GRIK1P39086 918 aa11.38□□□□□ -0.59
TCOF1-204ENST00000427724 RFC5P40937 340 aa11.38□□□□□ -0.59
TCOF1-204ENST00000427724 BCAR1P56945 870 aa11.38□□□□□ -0.59
TCOF1-204ENST00000427724 PGM5Q15124 567 aa11.38□□□□□ -0.59
TCOF1-204ENST00000427724 LLGL1Q15334 1064 aa11.38□□□□□ -0.59
TCOF1-204ENST00000427724 DUOXA2Q1HG44 320 aa11.38□□□□□ -0.59
TCOF1-204ENST00000427724 EARS2Q5JPH6 523 aaKnown RBP11.38□□□□□ -0.59
TCOF1-204ENST00000427724 SEL1L2Q5TEA6 688 aa11.38□□□□□ -0.59
TCOF1-204ENST00000427724 ATF7IP2Q5U623 682 aa11.38□□□□□ -0.59
TCOF1-204ENST00000427724 NFRKBQ6P4R8 1299 aa11.38□□□□□ -0.59
TCOF1-204ENST00000427724 FOXR1Q6PIV2 292 aa11.38□□□□□ -0.59
TCOF1-204ENST00000427724 PRPF31Q8WWY3 499 aaKnown RBP11.38□□□□□ -0.59
TCOF1-204ENST00000427724 PNKPQ96T60 521 aa11.38□□□□□ -0.59
TCOF1-204ENST00000427724 FDXACB1Q9BRP7 624 aaPredicted RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms