RNA–Protein interactions for RNA: ENST00000427482.6

SH3GL3-202, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3GL3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-202ENST00000427482 LRRN4CLQ8ND94 238 aa28.82■■■□□ 2.2
SH3GL3-202ENST00000427482 OR6J1Q8NGC5 347 aa28.82■■■□□ 2.2
SH3GL3-202ENST00000427482 SEMA4DQ92854 862 aa28.82■■■□□ 2.2
SH3GL3-202ENST00000427482 MSTO1Q9BUK6 570 aa28.82■■■□□ 2.2
SH3GL3-202ENST00000427482 TUBB2BQ9BVA1 445 aa28.82■■■□□ 2.2
SH3GL3-202ENST00000427482 MRPL4Q9BYD3 311 aaKnown RBP28.82■■■□□ 2.2
SH3GL3-202ENST00000427482 UBE2TQ9NPD8 197 aaPredicted RBP28.82■■■□□ 2.2
SH3GL3-202ENST00000427482 TLL2Q9Y6L7 1015 aa28.82■■■□□ 2.2
SH3GL3-202ENST00000427482 KAT6AQ92794 2004 aa28.82■■■□□ 2.2
SH3GL3-202ENST00000427482 FAM155AB1AL88 458 aaPredicted RBP28.81■■■□□ 2.2
SH3GL3-202ENST00000427482 MMP3P08254 477 aa28.81■■■□□ 2.2
SH3GL3-202ENST00000427482 DLATP10515 647 aaKnown RBP28.81■■■□□ 2.2
SH3GL3-202ENST00000427482 GPC3P51654 580 aa28.81■■■□□ 2.2
SH3GL3-202ENST00000427482 CLCN3P51790 818 aa28.81■■■□□ 2.2
SH3GL3-202ENST00000427482 CLDN10P78369 228 aa28.81■■■□□ 2.2
SH3GL3-202ENST00000427482 ARHGAP44Q17R89 818 aa28.81■■■□□ 2.2
SH3GL3-202ENST00000427482 NENFQ9UMX5 172 aa28.81■■■□□ 2.2
SH3GL3-202ENST00000427482 ASAP2O43150 1006 aa28.8■■■□□ 2.2
SH3GL3-202ENST00000427482 ADCY6O43306 1168 aa28.8■■■□□ 2.2
SH3GL3-202ENST00000427482 PRKCBP05771 671 aa28.8■■■□□ 2.2
SH3GL3-202ENST00000427482 ACOT2P49753 483 aa28.8■■■□□ 2.2
SH3GL3-202ENST00000427482 C10orf76Q5T2E6 689 aa28.8■■■□□ 2.2
SH3GL3-202ENST00000427482 METTL13Q8N6R0 699 aa28.8■■■□□ 2.2
SH3GL3-202ENST00000427482 USP6NLQ92738 828 aa28.8■■■□□ 2.2
SH3GL3-202ENST00000427482 ZBTB10Q96DT7 871 aa28.8■■■□□ 2.2
SH3GL3-202ENST00000427482 CARD6Q9BX69 1037 aa28.8■■■□□ 2.2
SH3GL3-202ENST00000427482 MGAMO43451 1857 aa28.8■■■□□ 2.2
SH3GL3-202ENST00000427482 ECM2O94769 699 aaPredicted RBP28.8■■■□□ 2.2
SH3GL3-202ENST00000427482 CCDC172P0C7W6 258 aa28.8■■■□□ 2.2
SH3GL3-202ENST00000427482 MATR3P43243 847 aaKnown RBP eCLIP28.8■■■□□ 2.22e-6■■■■□ 24.7
SH3GL3-202ENST00000427482 IGBP1P78318 339 aa28.8■■■□□ 2.2
SH3GL3-202ENST00000427482 NCBP1Q09161 790 aaKnown RBP28.8■■■□□ 2.2
SH3GL3-202ENST00000427482 MAPK6Q16659 721 aa28.8■■■□□ 2.2
SH3GL3-202ENST00000427482 SV2AQ7L0J3 742 aa28.8■■■□□ 2.2
SH3GL3-202ENST00000427482 VPS36Q86VN1 386 aa28.8■■■□□ 2.2
SH3GL3-202ENST00000427482 LINC01465Q8N7H1 131 aa28.8■■■□□ 2.2
SH3GL3-202ENST00000427482 FBXL13Q8NEE6 735 aa28.8■■■□□ 2.2
SH3GL3-202ENST00000427482 CDC23Q9UJX2 597 aa28.8■■■□□ 2.2
SH3GL3-202ENST00000427482 TTLL13PA6NNM8 815 aa28.79■■■□□ 2.2
SH3GL3-202ENST00000427482 MAGEB2O15479 319 aa28.79■■■□□ 2.2
SH3GL3-202ENST00000427482 C15orf39Q6ZRI6 1047 aa28.79■■■□□ 2.2
SH3GL3-202ENST00000427482 MNS1Q8NEH6 495 aa28.79■■■□□ 2.2
SH3GL3-202ENST00000427482 TAS1R2Q8TE23 839 aa28.79■■■□□ 2.2
SH3GL3-202ENST00000427482 H3BRB1 525 aa28.78■■■□□ 2.2
SH3GL3-202ENST00000427482 TULP1O00294 542 aaPredicted RBP28.78■■■□□ 2.2
SH3GL3-202ENST00000427482 TOM1L1O75674 476 aa28.78■■■□□ 2.2
SH3GL3-202ENST00000427482 GJB1P08034 283 aa28.78■■■□□ 2.2
SH3GL3-202ENST00000427482 AMPD2Q01433 879 aa28.78■■■□□ 2.2
SH3GL3-202ENST00000427482 TNFAIP2Q03169 654 aa28.78■■■□□ 2.2
SH3GL3-202ENST00000427482 BMS1Q14692 1282 aaKnown RBP28.78■■■□□ 2.2
SH3GL3-202ENST00000427482 NAA30Q147X3 362 aaPredicted RBP28.78■■■□□ 2.2
SH3GL3-202ENST00000427482 KIF22Q14807 665 aa28.78■■■□□ 2.2
SH3GL3-202ENST00000427482 TRIM58Q8NG06 486 aa28.78■■■□□ 2.2
SH3GL3-202ENST00000427482 OLIG1Q8TAK6 271 aa28.78■■■□□ 2.2
SH3GL3-202ENST00000427482 NLRP4Q96MN2 994 aa28.78■■■□□ 2.2
SH3GL3-202ENST00000427482 ACO2Q99798 780 aaKnown RBP28.78■■■□□ 2.2
SH3GL3-202ENST00000427482 TUT1Q9H6E5 874 aaKnown RBP28.78■■■□□ 2.2
SH3GL3-202ENST00000427482 ZFYVE28Q9HCC9 887 aa28.78■■■□□ 2.2
SH3GL3-202ENST00000427482 RAB20Q9NX57 234 aa28.78■■■□□ 2.2
SH3GL3-202ENST00000427482 RBAKQ9NYW8 714 aaPredicted RBP28.78■■■□□ 2.2
SH3GL3-202ENST00000427482 FLRT1Q9NZU1 646 aa28.78■■■□□ 2.2
SH3GL3-202ENST00000427482 NAGPAQ9UK23 515 aa28.78■■■□□ 2.2
SH3GL3-202ENST00000427482 ATP8B3O60423 1300 aa28.78■■■□□ 2.2
SH3GL3-202ENST00000427482 FOXN3O00409 490 aaPredicted RBP28.78■■■□□ 2.2
SH3GL3-202ENST00000427482 TACC1O75410 805 aa28.78■■■□□ 2.2
SH3GL3-202ENST00000427482 KLRC1P26715 233 aa28.78■■■□□ 2.2
SH3GL3-202ENST00000427482 WNT7BP56706 349 aa28.78■■■□□ 2.2
SH3GL3-202ENST00000427482 NAB2Q15742 525 aa28.78■■■□□ 2.2
SH3GL3-202ENST00000427482 ZBTB41Q5SVQ8 909 aa28.78■■■□□ 2.2
SH3GL3-202ENST00000427482 ZNF516Q92618 1163 aa28.78■■■□□ 2.2
SH3GL3-202ENST00000427482 FNBP1Q96RU3 617 aa28.78■■■□□ 2.2
SH3GL3-202ENST00000427482 SYT11Q9BT88 431 aa28.78■■■□□ 2.2
SH3GL3-202ENST00000427482 CAPN6Q9Y6Q1 641 aa28.78■■■□□ 2.2
SH3GL3-202ENST00000427482 CLDN3O15551 220 aa28.77■■■□□ 2.2
SH3GL3-202ENST00000427482 MOCS3O95396 460 aa28.77■■■□□ 2.2
SH3GL3-202ENST00000427482 PTENP60484 403 aa28.77■■■□□ 2.2
SH3GL3-202ENST00000427482 SREBF2Q12772 1141 aa28.77■■■□□ 2.2
SH3GL3-202ENST00000427482 DGKDQ16760 1214 aa28.77■■■□□ 2.2
SH3GL3-202ENST00000427482 RNF10Q8N5U6 811 aaKnown RBP28.77■■■□□ 2.2
SH3GL3-202ENST00000427482 CCDC102AQ96A19 550 aa28.77■■■□□ 2.2
SH3GL3-202ENST00000427482 NFKBIZQ9BYH8 718 aa28.77■■■□□ 2.2
SH3GL3-202ENST00000427482 SALL4Q9UJQ4 1053 aa28.77■■■□□ 2.2
SH3GL3-202ENST00000427482 ANO9A1A5B4 782 aa28.76■■■□□ 2.19
SH3GL3-202ENST00000427482 DDX3XO00571 662 aaKnown RBP eCLIP28.76■■■□□ 2.19
SH3GL3-202ENST00000427482 FZD8Q9H461 694 aa28.76■■■□□ 2.19
SH3GL3-202ENST00000427482 PDE11AQ9HCR9 933 aa28.76■■■□□ 2.19
SH3GL3-202ENST00000427482 KIAA0753Q2KHM9 967 aa28.76■■■□□ 2.19
SH3GL3-202ENST00000427482 PRAMEF19Q5SWL8 479 aa28.76■■■□□ 2.19
SH3GL3-202ENST00000427482 ALKBH5Q6P6C2 394 aaKnown RBP28.76■■■□□ 2.19
SH3GL3-202ENST00000427482 SLC30A5Q8TAD4 765 aa28.76■■■□□ 2.19
SH3GL3-202ENST00000427482 KREMEN1Q96MU8 473 aa28.76■■■□□ 2.19
SH3GL3-202ENST00000427482 NT5C1BQ96P26 610 aa28.76■■■□□ 2.19
SH3GL3-202ENST00000427482 PACSIN1Q9BY11 444 aa28.76■■■□□ 2.19
SH3GL3-202ENST00000427482 NOL12Q9UGY1 213 aaKnown RBP eCLIP28.76■■■□□ 2.19
SH3GL3-202ENST00000427482 V9GYY5 206 aaPredicted RBP28.76■■■□□ 2.19
SH3GL3-202ENST00000427482 ABLIM1O14639 778 aa28.75■■■□□ 2.19
SH3GL3-202ENST00000427482 FAM189A1O60320 539 aa28.75■■■□□ 2.19
SH3GL3-202ENST00000427482 TADA3O75528 432 aa28.75■■■□□ 2.19
SH3GL3-202ENST00000427482 ATP1A1P05023 1023 aaKnown RBP28.75■■■□□ 2.19
SH3GL3-202ENST00000427482 ZNF865P0CJ78 1059 aaPredicted RBP28.75■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms