RNA–Protein interactions for RNA: ENST00000427417.1

COMMD1-202, Transcript of copper metabolism domain containing 1, humanhuman

TSL 5

Gene COMMD1, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-202ENST00000427417 ARL6IP4Q66PJ3 421 aaKnown RBP11.23□□□□□ -0.61
COMMD1-202ENST00000427417 SYCE2Q6PIF2 218 aa11.23□□□□□ -0.61
COMMD1-202ENST00000427417 RNF135Q8IUD6 432 aa11.23□□□□□ -0.61
COMMD1-202ENST00000427417 COLGALT2Q8IYK4 626 aa11.23□□□□□ -0.61
COMMD1-202ENST00000427417 DRC1Q96MC2 740 aa11.23□□□□□ -0.61
COMMD1-202ENST00000427417 ZFP42Q96MM3 310 aa11.23□□□□□ -0.61
COMMD1-202ENST00000427417 NECTIN4Q96NY8 510 aa11.23□□□□□ -0.61
COMMD1-202ENST00000427417 TIPINQ9BVW5 301 aa11.23□□□□□ -0.61
COMMD1-202ENST00000427417 COLEC11Q9BWP8 271 aa11.23□□□□□ -0.61
COMMD1-202ENST00000427417 NT5C3AQ9H0P0 336 aa11.23□□□□□ -0.61
COMMD1-202ENST00000427417 S1PR5Q9H228 398 aa11.23□□□□□ -0.61
COMMD1-202ENST00000427417 RNF39Q9H2S5 420 aa11.23□□□□□ -0.61
COMMD1-202ENST00000427417 PARP2Q9UGN5 583 aa11.23□□□□□ -0.61
COMMD1-202ENST00000427417 DPP7Q9UHL4 492 aa11.23□□□□□ -0.61
COMMD1-202ENST00000427417 KCNG1Q9UIX4 513 aa11.23□□□□□ -0.61
COMMD1-202ENST00000427417 PRG3Q9Y2Y8 225 aaPredicted RBP11.23□□□□□ -0.61
COMMD1-202ENST00000427417 HCN4Q9Y3Q4 1203 aa11.23□□□□□ -0.61
COMMD1-202ENST00000427417 PRR33A8MZF0 331 aa11.22□□□□□ -0.61
COMMD1-202ENST00000427417 LOC730098B7Z3J9 87 aa11.22□□□□□ -0.61
COMMD1-202ENST00000427417 BMP15O95972 392 aa11.22□□□□□ -0.61
COMMD1-202ENST00000427417 URODP06132 367 aa11.22□□□□□ -0.61
COMMD1-202ENST00000427417 LIG1P18858 919 aa11.22□□□□□ -0.61
COMMD1-202ENST00000427417 PTPN14Q15678 1187 aa11.22□□□□□ -0.61
COMMD1-202ENST00000427417 DCAF4L1Q3SXM0 396 aa11.22□□□□□ -0.61
COMMD1-202ENST00000427417 HERC4Q5GLZ8 1057 aaPredicted RBP11.22□□□□□ -0.61
COMMD1-202ENST00000427417 ELMSAN1Q6PJG2 1045 aa11.22□□□□□ -0.61
COMMD1-202ENST00000427417 CDR2LQ86X02 465 aaPredicted RBP11.22□□□□□ -0.61
COMMD1-202ENST00000427417 FEZF2Q8TBJ5 459 aa11.22□□□□□ -0.61
COMMD1-202ENST00000427417 BSNDQ8WZ55 320 aa11.22□□□□□ -0.61
COMMD1-202ENST00000427417 CDK5RAP3Q96JB5 506 aa11.22□□□□□ -0.61
COMMD1-202ENST00000427417 RPGRIP1Q96KN7 1286 aa11.22□□□□□ -0.61
COMMD1-202ENST00000427417 RIPOR3Q96MK2 946 aa11.22□□□□□ -0.61
COMMD1-202ENST00000427417 HERC2P3Q9BVR0 1158 aa11.22□□□□□ -0.61
COMMD1-202ENST00000427417 CCDC113Q9H0I3 377 aa11.22□□□□□ -0.61
COMMD1-202ENST00000427417 ADAM7Q9H2U9 754 aa11.22□□□□□ -0.61
COMMD1-202ENST00000427417 PDZD7Q9H5P4 517 aa11.22□□□□□ -0.61
COMMD1-202ENST00000427417 C17orf75Q9HAS0 396 aa11.22□□□□□ -0.61
COMMD1-202ENST00000427417 NR2E1Q9Y466 385 aa11.22□□□□□ -0.61
COMMD1-202ENST00000427417 TECTAO75443 2155 aa11.21□□□□□ -0.61
COMMD1-202ENST00000427417 SPDYE4A6NLX3 237 aa11.21□□□□□ -0.61
COMMD1-202ENST00000427417 CCDC169A6NNP5 214 aa11.21□□□□□ -0.61
COMMD1-202ENST00000427417 PP2D1A8MPX8 630 aa11.21□□□□□ -0.61
COMMD1-202ENST00000427417 E9PMD0 336 aa11.21□□□□□ -0.61
COMMD1-202ENST00000427417 K7ERI5 159 aa11.21□□□□□ -0.61
COMMD1-202ENST00000427417 SLC26A4O43511 780 aa11.21□□□□□ -0.61
COMMD1-202ENST00000427417 SSBP05455 408 aaKnown RBP eCLIP11.21□□□□□ -0.61
COMMD1-202ENST00000427417 ADH1AP07327 375 aa11.21□□□□□ -0.61
COMMD1-202ENST00000427417 PDCP20941 246 aa11.21□□□□□ -0.61
COMMD1-202ENST00000427417 KLRC2P26717 231 aa11.21□□□□□ -0.61
COMMD1-202ENST00000427417 MTHFRP42898 656 aa11.21□□□□□ -0.61
COMMD1-202ENST00000427417 DMP1Q13316 513 aaPredicted RBP11.21□□□□□ -0.61
COMMD1-202ENST00000427417 ZRSR1Q15695 479 aaKnown RBP11.21□□□□□ -0.61
COMMD1-202ENST00000427417 IL17AQ16552 155 aa11.21□□□□□ -0.61
COMMD1-202ENST00000427417 HYIQ5T013 277 aa11.21□□□□□ -0.61
COMMD1-202ENST00000427417 KIAA1841Q6NSI8 718 aa11.21□□□□□ -0.61
COMMD1-202ENST00000427417 KANK3Q6NY19 840 aa11.21□□□□□ -0.61
COMMD1-202ENST00000427417 BRAPQ7Z569 592 aa11.21□□□□□ -0.61
COMMD1-202ENST00000427417 CABP7Q86V35 215 aa11.21□□□□□ -0.61
COMMD1-202ENST00000427417 AK8Q96MA6 479 aa11.21□□□□□ -0.61
COMMD1-202ENST00000427417 VN1R3Q9BXE9 311 aa11.21□□□□□ -0.61
COMMD1-202ENST00000427417 MARCH5Q9NX47 278 aa11.21□□□□□ -0.61
COMMD1-202ENST00000427417 MIOSQ9NXC5 875 aa11.21□□□□□ -0.61
COMMD1-202ENST00000427417 KCND2Q9NZV8 630 aa11.21□□□□□ -0.61
COMMD1-202ENST00000427417 KLK14Q9P0G3 267 aa11.21□□□□□ -0.61
COMMD1-202ENST00000427417 RBM19Q9Y4C8 960 aaKnown RBP11.21□□□□□ -0.61
COMMD1-202ENST00000427417 VWA3AA6NCI4 1184 aa11.2□□□□□ -0.62
COMMD1-202ENST00000427417 LILRB3O75022 631 aa11.2□□□□□ -0.62
COMMD1-202ENST00000427417 HIP1RO75146 1068 aa11.2□□□□□ -0.62
COMMD1-202ENST00000427417 TADA2AO75478 443 aa11.2□□□□□ -0.62
COMMD1-202ENST00000427417 THP07101 528 aa11.2□□□□□ -0.62
COMMD1-202ENST00000427417 WEE2P0C1S8 567 aa11.2□□□□□ -0.62
COMMD1-202ENST00000427417 GUCY2CP25092 1073 aa11.2□□□□□ -0.62
COMMD1-202ENST00000427417 CDC25AP30304 524 aa11.2□□□□□ -0.62
COMMD1-202ENST00000427417 NPTX2P47972 431 aa11.2□□□□□ -0.62
COMMD1-202ENST00000427417 GLUD2P49448 558 aa11.2□□□□□ -0.62
COMMD1-202ENST00000427417 PEX3P56589 373 aa11.2□□□□□ -0.62
COMMD1-202ENST00000427417 CREMQ03060 361 aa11.2□□□□□ -0.62
COMMD1-202ENST00000427417 TUSC3Q13454 348 aa11.2□□□□□ -0.62
COMMD1-202ENST00000427417 ATAT1Q5SQI0 421 aa11.2□□□□□ -0.62
COMMD1-202ENST00000427417 ATF7IP2Q5U623 682 aa11.2□□□□□ -0.62
COMMD1-202ENST00000427417 RINT1Q6NUQ1 792 aa11.2□□□□□ -0.62
COMMD1-202ENST00000427417 RNF168Q8IYW5 571 aaPredicted RBP11.2□□□□□ -0.62
COMMD1-202ENST00000427417 C12orf76Q8N812 135 aaPredicted RBP11.2□□□□□ -0.62
COMMD1-202ENST00000427417 GSTCDQ8NEC7 633 aa11.2□□□□□ -0.62
COMMD1-202ENST00000427417 SLC22A17Q8WUG5 538 aa11.2□□□□□ -0.62
COMMD1-202ENST00000427417 FBXL18Q96ME1 805 aa11.2□□□□□ -0.62
COMMD1-202ENST00000427417 KLHL5Q96PQ7 755 aa11.2□□□□□ -0.62
COMMD1-202ENST00000427417 MMTAG2Q9BU76 263 aaKnown RBP11.2□□□□□ -0.62
COMMD1-202ENST00000427417 KIFC3Q9BVG8 833 aa11.2□□□□□ -0.62
COMMD1-202ENST00000427417 TMEM134Q9H6X4 195 aa11.2□□□□□ -0.62
COMMD1-202ENST00000427417 SFXN1Q9H9B4 322 aa11.2□□□□□ -0.62
COMMD1-202ENST00000427417 KMT5AQ9NQR1 393 aa11.2□□□□□ -0.62
COMMD1-202ENST00000427417 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.2□□□□□ -0.62
COMMD1-202ENST00000427417 SNTG2Q9NY99 539 aa11.2□□□□□ -0.62
COMMD1-202ENST00000427417 ADAM28Q9UKQ2 775 aa11.2□□□□□ -0.62
COMMD1-202ENST00000427417 ARIH1Q9Y4X5 557 aaPredicted RBP11.2□□□□□ -0.62
COMMD1-202ENST00000427417 SF3B1O75533 1304 aaKnown RBP eCLIP11.19□□□□□ -0.62
COMMD1-202ENST00000427417 TTLL13PA6NNM8 815 aa11.19□□□□□ -0.62
COMMD1-202ENST00000427417 F8W810 466 aa11.19□□□□□ -0.62
COMMD1-202ENST00000427417 C2CD2LO14523 706 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms