RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 A1BGP04217 495 aa15.25■□□□□ 0.03
PTPN13-203ENST00000427191 OSBPL5Q9H0X9 879 aaPredicted RBP15.25■□□□□ 0.03
PTPN13-203ENST00000427191 PDP2Q9P2J9 529 aa15.25■□□□□ 0.03
PTPN13-203ENST00000427191 PPEF1O14829 653 aaPredicted RBP15.25■□□□□ 0.03
PTPN13-203ENST00000427191 SPATA21Q7Z572 469 aa15.25■□□□□ 0.03
PTPN13-203ENST00000427191 VPS37AQ8NEZ2 397 aa15.25■□□□□ 0.03
PTPN13-203ENST00000427191 ASIC4Q96FT7 647 aa15.25■□□□□ 0.03
PTPN13-203ENST00000427191 MAML3Q96JK9 1138 aa15.25■□□□□ 0.03
PTPN13-203ENST00000427191 DNAJC12Q9UKB3 198 aa15.25■□□□□ 0.03
PTPN13-203ENST00000427191 MAGED2Q9UNF1 606 aaPredicted RBP15.25■□□□□ 0.03
PTPN13-203ENST00000427191 FNDC3AQ9Y2H6 1198 aaKnown RBP15.25■□□□□ 0.03
PTPN13-203ENST00000427191 TCP10L2B9ZVM9 353 aa15.24■□□□□ 0.03
PTPN13-203ENST00000427191 SMYD4Q8IYR2 804 aaPredicted RBP15.24■□□□□ 0.03
PTPN13-203ENST00000427191 FAM20AQ96MK3 541 aa15.24■□□□□ 0.03
PTPN13-203ENST00000427191 SAMSN1Q9NSI8 373 aaKnown RBP15.24■□□□□ 0.03
PTPN13-203ENST00000427191 MTO1Q9Y2Z2 717 aaKnown RBP15.24■□□□□ 0.03
PTPN13-203ENST00000427191 CDY2AQ9Y6F7 541 aa15.24■□□□□ 0.03
PTPN13-203ENST00000427191 CDY1Q9Y6F8 540 aa15.24■□□□□ 0.03
PTPN13-203ENST00000427191 CDH16O75309 829 aa15.24■□□□□ 0.03
PTPN13-203ENST00000427191 KITP10721 976 aa15.24■□□□□ 0.03
PTPN13-203ENST00000427191 VCAM1P19320 739 aa15.24■□□□□ 0.03
PTPN13-203ENST00000427191 GYG1P46976 350 aa15.24■□□□□ 0.03
PTPN13-203ENST00000427191 CDC42EP1Q00587 391 aa15.24■□□□□ 0.03
PTPN13-203ENST00000427191 C3orf20Q8ND61 904 aa15.24■□□□□ 0.03
PTPN13-203ENST00000427191 PCIF1Q9H4Z3 704 aa15.24■□□□□ 0.03
PTPN13-203ENST00000427191 PEG3Q9GZU2 1588 aa15.24■□□□□ 0.03
PTPN13-203ENST00000427191 CALML6Q8TD86 181 aa15.24■□□□□ 0.03
PTPN13-203ENST00000427191 FRMD8Q9BZ67 464 aaPredicted RBP15.24■□□□□ 0.03
PTPN13-203ENST00000427191 AURKCQ9UQB9 309 aa15.24■□□□□ 0.03
PTPN13-203ENST00000427191 BCAR1P56945 870 aa15.24■□□□□ 0.03
PTPN13-203ENST00000427191 KRT76Q01546 638 aa15.24■□□□□ 0.03
PTPN13-203ENST00000427191 POU5F1BQ06416 359 aa15.24■□□□□ 0.03
PTPN13-203ENST00000427191 CNGA2Q16280 664 aa15.24■□□□□ 0.03
PTPN13-203ENST00000427191 ANO4Q32M45 955 aa15.24■□□□□ 0.03
PTPN13-203ENST00000427191 CCDC137Q6PK04 289 aaKnown RBP15.24■□□□□ 0.03
PTPN13-203ENST00000427191 NLRP10Q86W26 655 aa15.24■□□□□ 0.03
PTPN13-203ENST00000427191 DDI1Q8WTU0 396 aa15.24■□□□□ 0.03
PTPN13-203ENST00000427191 ZNF496Q96IT1 587 aaPredicted RBP15.24■□□□□ 0.03
PTPN13-203ENST00000427191 VPS50Q96JG6 964 aa15.24■□□□□ 0.03
PTPN13-203ENST00000427191 RANBP17Q9H2T7 1088 aaKnown RBP15.24■□□□□ 0.03
PTPN13-203ENST00000427191 TMEM161AQ9NX61 479 aa15.24■□□□□ 0.03
PTPN13-203ENST00000427191 NUP107P57740 925 aa15.24■□□□□ 0.03
PTPN13-203ENST00000427191 STILQ15468 1287 aa15.24■□□□□ 0.03
PTPN13-203ENST00000427191 RFFLQ8WZ73 363 aa15.24■□□□□ 0.03
PTPN13-203ENST00000427191 ATP10BO94823 1461 aa15.24■□□□□ 0.03
PTPN13-203ENST00000427191 SCP2P22307 547 aa15.24■□□□□ 0.03
PTPN13-203ENST00000427191 PURAQ00577 322 aaKnown RBP15.24■□□□□ 0.03
PTPN13-203ENST00000427191 FAM9CQ8IZT9 166 aa15.24■□□□□ 0.03
PTPN13-203ENST00000427191 DCUN1D1Q96GG9 259 aa15.24■□□□□ 0.03
PTPN13-203ENST00000427191 DCTN4Q9UJW0 460 aa15.24■□□□□ 0.03
PTPN13-203ENST00000427191 PLEKHG2Q9H7P9 1386 aa15.24■□□□□ 0.03
PTPN13-203ENST00000427191 PRPF4O43172 522 aaKnown RBP eCLIP15.24■□□□□ 0.03
PTPN13-203ENST00000427191 GJC2Q5T442 439 aaPredicted RBP15.24■□□□□ 0.03
PTPN13-203ENST00000427191 PPM1NQ8N819 430 aa15.24■□□□□ 0.03
PTPN13-203ENST00000427191 APPL2Q8NEU8 664 aa15.24■□□□□ 0.03
PTPN13-203ENST00000427191 QTRT2Q9H974 415 aaKnown RBP15.24■□□□□ 0.03
PTPN13-203ENST00000427191 GPC3P51654 580 aa15.23■□□□□ 0.03
PTPN13-203ENST00000427191 RMDN2Q96LZ7 410 aa15.23■□□□□ 0.03
PTPN13-203ENST00000427191 DYRK4Q9NR20 520 aa15.23■□□□□ 0.03
PTPN13-203ENST00000427191 HEY1Q9Y5J3 304 aa15.23■□□□□ 0.03
PTPN13-203ENST00000427191 MTFR1Q15390 333 aa15.23■□□□□ 0.03
PTPN13-203ENST00000427191 ADCK5Q3MIX3 580 aa15.23■□□□□ 0.03
PTPN13-203ENST00000427191 RABGAP1LQ5R372 815 aa15.23■□□□□ 0.03
PTPN13-203ENST00000427191 PKN3Q6P5Z2 889 aa15.23■□□□□ 0.03
PTPN13-203ENST00000427191 BTNL9Q6UXG8 535 aa15.23■□□□□ 0.03
PTPN13-203ENST00000427191 RBBP8Q99708 897 aa15.23■□□□□ 0.03
PTPN13-203ENST00000427191 OLFM1Q99784 485 aa15.23■□□□□ 0.03
PTPN13-203ENST00000427191 PTPRTO14522 1441 aa15.23■□□□□ 0.03
PTPN13-203ENST00000427191 ANXA11P50995 505 aaKnown RBP15.23■□□□□ 0.03
PTPN13-203ENST00000427191 PDIA2Q13087 525 aaKnown RBP15.23■□□□□ 0.03
PTPN13-203ENST00000427191 ZBED8Q8IZ13 594 aa15.23■□□□□ 0.03
PTPN13-203ENST00000427191 NDUFB9Q9Y6M9 179 aa15.23■□□□□ 0.03
PTPN13-203ENST00000427191 PI4K2BG5E9Z4 385 aa15.23■□□□□ 0.03
PTPN13-203ENST00000427191 KCNA6P17658 529 aa15.23■□□□□ 0.03
PTPN13-203ENST00000427191 HMOX2P30519 316 aa15.23■□□□□ 0.03
PTPN13-203ENST00000427191 CLEC4FQ8N1N0 589 aa15.23■□□□□ 0.03
PTPN13-203ENST00000427191 ANKRD27Q96NW4 1050 aa15.23■□□□□ 0.03
PTPN13-203ENST00000427191 SPDYE5A6NIY4 337 aa15.23■□□□□ 0.03
PTPN13-203ENST00000427191 HPCAP84074 193 aa15.23■□□□□ 0.03
PTPN13-203ENST00000427191 SPDYE7PQ495Y7 208 aa15.23■□□□□ 0.03
PTPN13-203ENST00000427191 CFAP69A5D8W1 941 aa15.23■□□□□ 0.03
PTPN13-203ENST00000427191 MEFVO15553 781 aaPredicted RBP15.23■□□□□ 0.03
PTPN13-203ENST00000427191 CLK1P49759 484 aaKnown RBP15.23■□□□□ 0.03
PTPN13-203ENST00000427191 TRIP4Q15650 581 aaPredicted RBP15.23■□□□□ 0.03
PTPN13-203ENST00000427191 KBTBD12Q3ZCT8 623 aa15.23■□□□□ 0.03
PTPN13-203ENST00000427191 DGKHQ86XP1 1220 aa15.23■□□□□ 0.03
PTPN13-203ENST00000427191 SLAIN2Q9P270 581 aa15.23■□□□□ 0.03
PTPN13-203ENST00000427191 PRELPP51888 382 aa15.22■□□□□ 0.03
PTPN13-203ENST00000427191 MTERF2Q49AM1 385 aa15.22■□□□□ 0.03
PTPN13-203ENST00000427191 KIAA0825Q8IV33 1275 aa15.22■□□□□ 0.03
PTPN13-203ENST00000427191 ZNF560Q96MR9 790 aa15.22■□□□□ 0.03
PTPN13-203ENST00000427191 KRT14P02533 472 aa15.22■□□□□ 0.03
PTPN13-203ENST00000427191 IL6STP40189 918 aaPredicted RBP15.22■□□□□ 0.03
PTPN13-203ENST00000427191 LRRC41Q15345 812 aa15.22■□□□□ 0.03
PTPN13-203ENST00000427191 CDYLQ9Y232 598 aa15.22■□□□□ 0.03
PTPN13-203ENST00000427191 SNX24Q9Y343 169 aa15.22■□□□□ 0.03
PTPN13-203ENST00000427191 CCDC142Q17RM4 750 aa15.22■□□□□ 0.03
PTPN13-203ENST00000427191 KCTD1Q719H9 257 aa15.22■□□□□ 0.03
PTPN13-203ENST00000427191 ZBTB33Q86T24 672 aa15.22■□□□□ 0.03
PTPN13-203ENST00000427191 AGBL1Q96MI9 1066 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms