RNA–Protein interactions for RNA: ENST00000426886.1

SMIM12-203, Transcript of small integral membrane protein 12, humanhuman

TSL 1 (best)

Gene SMIM12, Length 2,618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12-203ENST00000426886 A0A0C4DFX4 3053 aa13.75□□□□□ -0.21
SMIM12-203ENST00000426886 REV3LO60673 3130 aa13.75□□□□□ -0.21
SMIM12-203ENST00000426886 TISP43B9A030 160 aa13.75□□□□□ -0.21
SMIM12-203ENST00000426886 N4BP3O15049 544 aa13.75□□□□□ -0.21
SMIM12-203ENST00000426886 PRPF40AO75400 957 aaKnown RBP13.75□□□□□ -0.21
SMIM12-203ENST00000426886 MYBP10242 640 aa13.75□□□□□ -0.21
SMIM12-203ENST00000426886 CTNNB1P35222 781 aa13.75□□□□□ -0.21
SMIM12-203ENST00000426886 MLH1P40692 756 aa13.75□□□□□ -0.21
SMIM12-203ENST00000426886 RNASELQ05823 741 aaKnown RBP13.75□□□□□ -0.21
SMIM12-203ENST00000426886 COASYQ13057 564 aa13.75□□□□□ -0.21
SMIM12-203ENST00000426886 EPC2Q52LR7 807 aa13.75□□□□□ -0.21
SMIM12-203ENST00000426886 GPR153Q6NV75 609 aa13.75□□□□□ -0.21
SMIM12-203ENST00000426886 LRRC55Q6ZSA7 311 aa13.75□□□□□ -0.21
SMIM12-203ENST00000426886 THNSL1Q8IYQ7 743 aa13.75□□□□□ -0.21
SMIM12-203ENST00000426886 GDPD5Q8WTR4 605 aa13.75□□□□□ -0.21
SMIM12-203ENST00000426886 CDX2Q99626 313 aaPredicted RBP13.75□□□□□ -0.21
SMIM12-203ENST00000426886 C7orf25Q9BPX7 421 aa13.75□□□□□ -0.21
SMIM12-203ENST00000426886 TMEM117Q9H0C3 514 aa13.75□□□□□ -0.21
SMIM12-203ENST00000426886 RNF216Q9NWF9 866 aaPredicted RBP13.75□□□□□ -0.21
SMIM12-203ENST00000426886 HNRNPDLO14979 420 aaKnown RBP13.75□□□□□ -0.21
SMIM12-203ENST00000426886 OFD1O75665 1012 aa13.75□□□□□ -0.21
SMIM12-203ENST00000426886 LIG4P49917 911 aa13.75□□□□□ -0.21
SMIM12-203ENST00000426886 TMEM192Q8IY95 271 aa13.75□□□□□ -0.21
SMIM12-203ENST00000426886 CCDC51Q96ER9 411 aa13.75□□□□□ -0.21
SMIM12-203ENST00000426886 GUCD1Q96NT3 240 aa13.75□□□□□ -0.21
SMIM12-203ENST00000426886 NT5C1B-RDH14C9J2C7 533 aa13.74□□□□□ -0.21
SMIM12-203ENST00000426886 HOXA2O43364 376 aa13.74□□□□□ -0.21
SMIM12-203ENST00000426886 PRPF6O94906 941 aaKnown RBP13.74□□□□□ -0.21
SMIM12-203ENST00000426886 PRR29P0C7W0 189 aa13.74□□□□□ -0.21
SMIM12-203ENST00000426886 GAP43P17677 238 aa13.74□□□□□ -0.21
SMIM12-203ENST00000426886 KRBA2Q6ZNG9 492 aa13.74□□□□□ -0.21
SMIM12-203ENST00000426886 MRPL10Q7Z7H8 261 aaKnown RBP13.74□□□□□ -0.21
SMIM12-203ENST00000426886 CMTR2Q8IYT2 770 aaKnown RBP13.74□□□□□ -0.21
SMIM12-203ENST00000426886 ERCC4Q92889 916 aaPredicted RBP13.74□□□□□ -0.21
SMIM12-203ENST00000426886 CXCL16Q9H2A7 254 aa13.74□□□□□ -0.21
SMIM12-203ENST00000426886 TNFSF13BQ9Y275 285 aa13.74□□□□□ -0.21
SMIM12-203ENST00000426886 VCANP13611 3396 aa13.74□□□□□ -0.21
SMIM12-203ENST00000426886 H0YCG3 227 aa13.74□□□□□ -0.21
SMIM12-203ENST00000426886 CLDN3O15551 220 aa13.74□□□□□ -0.21
SMIM12-203ENST00000426886 NR1I2O75469 434 aa13.74□□□□□ -0.21
SMIM12-203ENST00000426886 GTF2BQ00403 316 aa13.74□□□□□ -0.21
SMIM12-203ENST00000426886 CSPP1Q1MSJ5 1256 aa13.74□□□□□ -0.21
SMIM12-203ENST00000426886 NOMO2Q5JPE7 1267 aa13.74□□□□□ -0.21
SMIM12-203ENST00000426886 FBXO22Q8NEZ5 403 aa13.74□□□□□ -0.21
SMIM12-203ENST00000426886 CDT1Q9H211 546 aa13.74□□□□□ -0.21
SMIM12-203ENST00000426886 MAGEF1Q9HAY2 307 aa13.74□□□□□ -0.21
SMIM12-203ENST00000426886 ALG13Q9NP73 1137 aaKnown RBP13.74□□□□□ -0.21
SMIM12-203ENST00000426886 MIOSQ9NXC5 875 aa13.74□□□□□ -0.21
SMIM12-203ENST00000426886 UNC80Q8N2C7 3258 aa13.73□□□□□ -0.21
SMIM12-203ENST00000426886 FAM237AA0A1B0GTK4 181 aa13.73□□□□□ -0.21
SMIM12-203ENST00000426886 FRMD3A2A2Y4 597 aa13.73□□□□□ -0.21
SMIM12-203ENST00000426886 ARL5CA6NH57 179 aa13.73□□□□□ -0.21
SMIM12-203ENST00000426886 ZC3H11AO75152 810 aaKnown RBP eCLIP13.73□□□□□ -0.21
SMIM12-203ENST00000426886 SCNN1GP51170 649 aa13.73□□□□□ -0.21
SMIM12-203ENST00000426886 ERVK-21P61565 698 aa13.73□□□□□ -0.21
SMIM12-203ENST00000426886 SNW1Q13573 536 aaKnown RBP13.73□□□□□ -0.21
SMIM12-203ENST00000426886 ZNF280BQ86YH2 543 aa13.73□□□□□ -0.21
SMIM12-203ENST00000426886 FMR1NBQ8N0W7 255 aaPredicted RBP13.73□□□□□ -0.21
SMIM12-203ENST00000426886 MICALL1Q8N3F8 863 aa13.73□□□□□ -0.21
SMIM12-203ENST00000426886 PPM1EQ8WY54 764 aa13.73□□□□□ -0.21
SMIM12-203ENST00000426886 PTPRHQ9HD43 1115 aa13.73□□□□□ -0.21
SMIM12-203ENST00000426886 SLC39A2Q9NP94 309 aa13.73□□□□□ -0.21
SMIM12-203ENST00000426886 TBC1D13Q9NVG8 400 aa13.73□□□□□ -0.21
SMIM12-203ENST00000426886 SEL1LQ9UBV2 794 aa13.73□□□□□ -0.21
SMIM12-203ENST00000426886 MYH11P35749 1972 aa13.73□□□□□ -0.21
SMIM12-203ENST00000426886 ANKRD63C9JTQ0 380 aa13.73□□□□□ -0.21
SMIM12-203ENST00000426886 TOM1L1O75674 476 aa13.73□□□□□ -0.21
SMIM12-203ENST00000426886 LINC00271P0C7V0 271 aa13.73□□□□□ -0.21
SMIM12-203ENST00000426886 BMPR1AP36894 532 aa13.73□□□□□ -0.21
SMIM12-203ENST00000426886 ADGRE1Q14246 886 aa13.73□□□□□ -0.21
SMIM12-203ENST00000426886 MPZL3Q6UWV2 235 aa13.73□□□□□ -0.21
SMIM12-203ENST00000426886 FAM43BQ6ZT52 329 aaPredicted RBP13.73□□□□□ -0.21
SMIM12-203ENST00000426886 HACE1Q8IYU2 909 aa13.73□□□□□ -0.21
SMIM12-203ENST00000426886 SYCP3Q8IZU3 236 aa13.73□□□□□ -0.21
SMIM12-203ENST00000426886 RABGGTAQ92696 567 aa13.73□□□□□ -0.21
SMIM12-203ENST00000426886 HAPLN2Q9GZV7 340 aa13.73□□□□□ -0.21
SMIM12-203ENST00000426886 MYO7AQ13402 2215 aa13.72□□□□□ -0.21
SMIM12-203ENST00000426886 TMEM265A0A087WTH1 108 aa13.72□□□□□ -0.21
SMIM12-203ENST00000426886 RECQL4O94761 1208 aa13.72□□□□□ -0.21
SMIM12-203ENST00000426886 GLRA4Q5JXX5 417 aa13.72□□□□□ -0.21
SMIM12-203ENST00000426886 UNC13DQ70J99 1090 aa13.72□□□□□ -0.21
SMIM12-203ENST00000426886 LRRC43Q8N309 656 aa13.72□□□□□ -0.21
SMIM12-203ENST00000426886 NOC3LQ8WTT2 800 aaKnown RBP13.72□□□□□ -0.21
SMIM12-203ENST00000426886 CWH43Q9H720 699 aa13.72□□□□□ -0.21
SMIM12-203ENST00000426886 OLFML3Q9NRN5 406 aa13.72□□□□□ -0.21
SMIM12-203ENST00000426886 DNAJB4Q9UDY4 337 aa13.72□□□□□ -0.21
SMIM12-203ENST00000426886 USP25Q9UHP3 1055 aa13.72□□□□□ -0.21
SMIM12-203ENST00000426886 PCDHB13Q9Y5F0 798 aa13.72□□□□□ -0.21
SMIM12-203ENST00000426886 FAM160A1Q05DH4 1040 aa13.72□□□□□ -0.21
SMIM12-203ENST00000426886 PNOCQ13519 176 aa13.72□□□□□ -0.21
SMIM12-203ENST00000426886 DCAF4L1Q3SXM0 396 aa13.72□□□□□ -0.21
SMIM12-203ENST00000426886 FAM26FQ5R3K3 315 aa13.72□□□□□ -0.21
SMIM12-203ENST00000426886 MAP4K3Q8IVH8 894 aa13.72□□□□□ -0.21
SMIM12-203ENST00000426886 NELFCDQ8IXH7 590 aa13.72□□□□□ -0.21
SMIM12-203ENST00000426886 KLHL23Q8NBE8 558 aa13.72□□□□□ -0.21
SMIM12-203ENST00000426886 URGCPQ8TCY9 931 aa13.72□□□□□ -0.21
SMIM12-203ENST00000426886 CLP1Q92989 425 aaKnown RBP13.72□□□□□ -0.21
SMIM12-203ENST00000426886 CACNG4Q9UBN1 327 aa13.72□□□□□ -0.21
SMIM12-203ENST00000426886 PLAGL2Q9UPG8 496 aa13.72□□□□□ -0.21
SMIM12-203ENST00000426886 ABLIM1O14639 778 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms