RNA–Protein interactions for RNA: ENST00000425819.6

SCRN1-205, Transcript of secernin 1, humanhuman

TSL 2 BASIC

Gene SCRN1, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-205ENST00000425819 VWA3BQ502W6 1294 aa17.2■□□□□ 0.34
SCRN1-205ENST00000425819 SEZ6Q53EL9 994 aa17.2■□□□□ 0.34
SCRN1-205ENST00000425819 DCAF17Q5H9S7 520 aaPredicted RBP17.2■□□□□ 0.34
SCRN1-205ENST00000425819 ZBTB41Q5SVQ8 909 aa17.2■□□□□ 0.34
SCRN1-205ENST00000425819 TCERG1LQ5VWI1 586 aa17.2■□□□□ 0.34
SCRN1-205ENST00000425819 FAM126BQ8IXS8 530 aa17.2■□□□□ 0.34
SCRN1-205ENST00000425819 BORCS6Q96GS4 357 aa17.2■□□□□ 0.34
SCRN1-205ENST00000425819 FBXL18Q96ME1 805 aa17.2■□□□□ 0.34
SCRN1-205ENST00000425819 NOC2LQ9Y3T9 749 aaKnown RBP17.2■□□□□ 0.34
SCRN1-205ENST00000425819 KIAA0391O15091 583 aaKnown RBP17.19■□□□□ 0.34
SCRN1-205ENST00000425819 PQBP1O60828 265 aaKnown RBP17.19■□□□□ 0.34
SCRN1-205ENST00000425819 KRT13P13646 458 aa17.19■□□□□ 0.34
SCRN1-205ENST00000425819 DEKP35659 375 aaKnown RBP17.19■□□□□ 0.34
SCRN1-205ENST00000425819 ACOT2P49753 483 aa17.19■□□□□ 0.34
SCRN1-205ENST00000425819 NCBP1Q09161 790 aaKnown RBP17.19■□□□□ 0.34
SCRN1-205ENST00000425819 ZNF618Q5T7W0 954 aa17.19■□□□□ 0.34
SCRN1-205ENST00000425819 SLC39A5Q6ZMH5 540 aa17.19■□□□□ 0.34
SCRN1-205ENST00000425819 DRC7Q8IY82 874 aa17.19■□□□□ 0.34
SCRN1-205ENST00000425819 CDT1Q9H211 546 aa17.19■□□□□ 0.34
SCRN1-205ENST00000425819 NDST4Q9H3R1 872 aa17.19■□□□□ 0.34
SCRN1-205ENST00000425819 COL6A1P12109 1028 aa17.19■□□□□ 0.34
SCRN1-205ENST00000425819 CKBP12277 381 aa17.19■□□□□ 0.34
SCRN1-205ENST00000425819 UBXN1Q04323 297 aa17.19■□□□□ 0.34
SCRN1-205ENST00000425819 PCBP1Q15365 356 aaKnown RBP eCLIP17.19■□□□□ 0.34
SCRN1-205ENST00000425819 FAM228AQ86W67 206 aa17.19■□□□□ 0.34
SCRN1-205ENST00000425819 ANKLE1Q8NAG6 615 aa17.19■□□□□ 0.34
SCRN1-205ENST00000425819 SPC24Q8NBT2 197 aa17.19■□□□□ 0.34
SCRN1-205ENST00000425819 KIAA1586Q9HCI6 787 aa17.19■□□□□ 0.34
SCRN1-205ENST00000425819 A0A1B0GUA9 196 aa17.18■□□□□ 0.34
SCRN1-205ENST00000425819 ZNF233A6NK53 670 aa17.18■□□□□ 0.34
SCRN1-205ENST00000425819 MAPK13O15264 365 aa17.18■□□□□ 0.34
SCRN1-205ENST00000425819 OGTO15294 1046 aa17.18■□□□□ 0.34
SCRN1-205ENST00000425819 CAND2O75155 1236 aa17.18■□□□□ 0.34
SCRN1-205ENST00000425819 RPS6KA5O75582 802 aa17.18■□□□□ 0.34
SCRN1-205ENST00000425819 LDHAP00338 332 aaKnown RBP17.18■□□□□ 0.34
SCRN1-205ENST00000425819 TRIM49P0CI25 452 aa17.18■□□□□ 0.34
SCRN1-205ENST00000425819 TRIM49CP0CI26 452 aa17.18■□□□□ 0.34
SCRN1-205ENST00000425819 CDC25BP30305 580 aa17.18■□□□□ 0.34
SCRN1-205ENST00000425819 HOXA11P31270 313 aaPredicted RBP17.18■□□□□ 0.34
SCRN1-205ENST00000425819 TNFSF9P41273 254 aa17.18■□□□□ 0.34
SCRN1-205ENST00000425819 VAMP7P51809 220 aa17.18■□□□□ 0.34
SCRN1-205ENST00000425819 CYP24A1Q07973 514 aa17.18■□□□□ 0.34
SCRN1-205ENST00000425819 CCDC173Q0VFZ6 552 aa17.18■□□□□ 0.34
SCRN1-205ENST00000425819 BFSP1Q12934 665 aa17.18■□□□□ 0.34
SCRN1-205ENST00000425819 FKBP15Q5T1M5 1219 aa17.18■□□□□ 0.34
SCRN1-205ENST00000425819 CRELD2Q6UXH1 353 aaPredicted RBP17.18■□□□□ 0.34
SCRN1-205ENST00000425819 INTS8Q75QN2 995 aaKnown RBP17.18■□□□□ 0.34
SCRN1-205ENST00000425819 THNSL1Q8IYQ7 743 aa17.18■□□□□ 0.34
SCRN1-205ENST00000425819 PLEKHO2Q8TD55 490 aa17.18■□□□□ 0.34
SCRN1-205ENST00000425819 SLC35C1Q96A29 364 aa17.18■□□□□ 0.34
SCRN1-205ENST00000425819 CCDC127Q96BQ5 260 aa17.18■□□□□ 0.34
SCRN1-205ENST00000425819 OSBPL7Q9BZF2 842 aa17.18■□□□□ 0.34
SCRN1-205ENST00000425819 AGPAT5Q9NUQ2 364 aa17.18■□□□□ 0.34
SCRN1-205ENST00000425819 PIN4Q9Y237 131 aaKnown RBP17.18■□□□□ 0.34
SCRN1-205ENST00000425819 TLR3O15455 904 aaKnown RBP17.17■□□□□ 0.34
SCRN1-205ENST00000425819 FAM189A1O60320 539 aa17.17■□□□□ 0.34
SCRN1-205ENST00000425819 CD4P01730 458 aa17.17■□□□□ 0.34
SCRN1-205ENST00000425819 MCF2P10911 925 aa17.17■□□□□ 0.34
SCRN1-205ENST00000425819 GHRP10912 638 aa17.17■□□□□ 0.34
SCRN1-205ENST00000425819 OSTNP61366 133 aa17.17■□□□□ 0.34
SCRN1-205ENST00000425819 DLG4P78352 724 aa17.17■□□□□ 0.34
SCRN1-205ENST00000425819 KCNH2Q12809 1159 aa17.17■□□□□ 0.34
SCRN1-205ENST00000425819 TRIM60Q495X7 471 aa17.17■□□□□ 0.34
SCRN1-205ENST00000425819 FAM26DQ5JW98 314 aa17.17■□□□□ 0.34
SCRN1-205ENST00000425819 NOTUMQ6P988 496 aa17.17■□□□□ 0.34
SCRN1-205ENST00000425819 TMC6Q7Z403 805 aa17.17■□□□□ 0.34
SCRN1-205ENST00000425819 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.17■□□□□ 0.34
SCRN1-205ENST00000425819 CCDC155Q8N6L0 562 aa17.17■□□□□ 0.34
SCRN1-205ENST00000425819 CEP120Q8N960 986 aa17.17■□□□□ 0.34
SCRN1-205ENST00000425819 PAWRQ96IZ0 340 aaKnown RBP17.17■□□□□ 0.34
SCRN1-205ENST00000425819 PDLIM2Q96JY6 352 aa17.17■□□□□ 0.34
SCRN1-205ENST00000425819 MFSD14AQ96MC6 490 aa17.17■□□□□ 0.34
SCRN1-205ENST00000425819 ADPGKQ9BRR6 497 aa17.17■□□□□ 0.34
SCRN1-205ENST00000425819 C11orf49Q9H6J7 331 aa17.17■□□□□ 0.34
SCRN1-205ENST00000425819 MMRN2Q9H8L6 949 aa17.17■□□□□ 0.34
SCRN1-205ENST00000425819 MROH7Q68CQ1 1323 aa17.17■□□□□ 0.34
SCRN1-205ENST00000425819 NPTXRO95502 500 aa17.16■□□□□ 0.34
SCRN1-205ENST00000425819 AFPP02771 609 aaKnown RBP17.16■□□□□ 0.34
SCRN1-205ENST00000425819 AXLP30530 894 aa17.16■□□□□ 0.34
SCRN1-205ENST00000425819 PPP2R3AQ06190 1150 aa17.16■□□□□ 0.34
SCRN1-205ENST00000425819 NFX1Q12986 1120 aaKnown RBP17.16■□□□□ 0.34
SCRN1-205ENST00000425819 FBXO47Q5MNV8 452 aa17.16■□□□□ 0.34
SCRN1-205ENST00000425819 VSTM4Q8IW00 320 aa17.16■□□□□ 0.34
SCRN1-205ENST00000425819 AGO3Q9H9G7 860 aaKnown RBP17.16■□□□□ 0.34
SCRN1-205ENST00000425819 RBAKQ9NYW8 714 aaPredicted RBP17.16■□□□□ 0.34
SCRN1-205ENST00000425819 ST3GAL5Q9UNP4 418 aa17.16■□□□□ 0.34
SCRN1-205ENST00000425819 CD52P31358 61 aa17.15■□□□□ 0.34
SCRN1-205ENST00000425819 WNT7BP56706 349 aa17.15■□□□□ 0.34
SCRN1-205ENST00000425819 HSP90AA2PQ14568 343 aaPredicted RBP17.15■□□□□ 0.34
SCRN1-205ENST00000425819 LPIN1Q14693 890 aa17.15■□□□□ 0.34
SCRN1-205ENST00000425819 SLC27A1Q6PCB7 646 aa17.15■□□□□ 0.34
SCRN1-205ENST00000425819 TRAF7Q6Q0C0 670 aa17.15■□□□□ 0.34
SCRN1-205ENST00000425819 ANKRD33Q7Z3H0 272 aa17.15■□□□□ 0.34
SCRN1-205ENST00000425819 TMEM192Q8IY95 271 aa17.15■□□□□ 0.34
SCRN1-205ENST00000425819 CAGE1Q8TC20 777 aa17.15■□□□□ 0.34
SCRN1-205ENST00000425819 PPP1R9BQ96SB3 815 aa17.15■□□□□ 0.34
SCRN1-205ENST00000425819 EIF2AQ9BY44 585 aaKnown RBP17.15■□□□□ 0.34
SCRN1-205ENST00000425819 CPSF3Q9UKF6 684 aaKnown RBP17.15■□□□□ 0.34
SCRN1-205ENST00000425819 DCDC2CA8MYV0 355 aa17.15■□□□□ 0.34
SCRN1-205ENST00000425819 GPR182O15218 404 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms