RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 TSHZ1Q6ZSZ6 1077 aa16.49■□□□□ 0.23
ACTB-204ENST00000425660 FMNL3Q8IVF7 1028 aa16.49■□□□□ 0.23
ACTB-204ENST00000425660 CCDC127Q96BQ5 260 aa16.49■□□□□ 0.23
ACTB-204ENST00000425660 ZBTB45Q96K62 511 aaPredicted RBP16.49■□□□□ 0.23
ACTB-204ENST00000425660 ACO2Q99798 780 aaKnown RBP16.49■□□□□ 0.23
ACTB-204ENST00000425660 CREBZFQ9NS37 354 aa16.49■□□□□ 0.23
ACTB-204ENST00000425660 F8VZ95 297 aa16.49■□□□□ 0.23
ACTB-204ENST00000425660 PROZP22891 400 aa16.49■□□□□ 0.23
ACTB-204ENST00000425660 PSMC4P43686 418 aa16.49■□□□□ 0.23
ACTB-204ENST00000425660 CPT1AP50416 773 aa16.49■□□□□ 0.23
ACTB-204ENST00000425660 MBTD1Q05BQ5 628 aa16.49■□□□□ 0.23
ACTB-204ENST00000425660 MCL1Q07820 350 aa16.49■□□□□ 0.23
ACTB-204ENST00000425660 SPA17Q15506 151 aa16.49■□□□□ 0.23
ACTB-204ENST00000425660 ASIC2Q16515 512 aa16.49■□□□□ 0.23
ACTB-204ENST00000425660 FAM187BQ17R55 369 aa16.49■□□□□ 0.23
ACTB-204ENST00000425660 DEFB115Q30KQ5 88 aa16.49■□□□□ 0.23
ACTB-204ENST00000425660 GJB7Q6PEY0 223 aa16.49■□□□□ 0.23
ACTB-204ENST00000425660 C15orf39Q6ZRI6 1047 aa16.49■□□□□ 0.23
ACTB-204ENST00000425660 ZNF592Q92610 1267 aa16.49■□□□□ 0.23
ACTB-204ENST00000425660 KAT2BQ92831 832 aa16.49■□□□□ 0.23
ACTB-204ENST00000425660 NLRP4Q96MN2 994 aa16.49■□□□□ 0.23
ACTB-204ENST00000425660 MSTO1Q9BUK6 570 aa16.49■□□□□ 0.23
ACTB-204ENST00000425660 GPR88Q9GZN0 384 aa16.49■□□□□ 0.23
ACTB-204ENST00000425660 DEF6Q9H4E7 631 aa16.49■□□□□ 0.23
ACTB-204ENST00000425660 PTPRHQ9HD43 1115 aa16.49■□□□□ 0.23
ACTB-204ENST00000425660 MYO1AQ9UBC5 1043 aa16.49■□□□□ 0.23
ACTB-204ENST00000425660 DNAJC12Q9UKB3 198 aa16.49■□□□□ 0.23
ACTB-204ENST00000425660 RRN3P2A6NIE6 340 aa16.48■□□□□ 0.23
ACTB-204ENST00000425660 AKR1B10O60218 316 aa16.48■□□□□ 0.23
ACTB-204ENST00000425660 ANXA13P27216 316 aa16.48■□□□□ 0.23
ACTB-204ENST00000425660 GPC3P51654 580 aa16.48■□□□□ 0.23
ACTB-204ENST00000425660 KLHL30Q0D2K2 578 aa16.48■□□□□ 0.23
ACTB-204ENST00000425660 TDRD12Q587J7 1177 aaKnown RBP16.48■□□□□ 0.23
ACTB-204ENST00000425660 VTI1AQ96AJ9 217 aa16.48■□□□□ 0.23
ACTB-204ENST00000425660 POP1Q99575 1024 aaKnown RBP16.48■□□□□ 0.23
ACTB-204ENST00000425660 CFHR5Q9BXR6 569 aa16.48■□□□□ 0.23
ACTB-204ENST00000425660 ARHGAP39Q9C0H5 1083 aa16.48■□□□□ 0.23
ACTB-204ENST00000425660 ANKFY1Q9P2R3 1169 aa16.48■□□□□ 0.23
ACTB-204ENST00000425660 DNAI1Q9UI46 699 aa16.48■□□□□ 0.23
ACTB-204ENST00000425660 NRCAMQ92823 1304 aa16.48■□□□□ 0.23
ACTB-204ENST00000425660 HAS3O00219 553 aa16.47■□□□□ 0.23
ACTB-204ENST00000425660 KIF5CO60282 957 aa16.47■□□□□ 0.23
ACTB-204ENST00000425660 ABL1P00519 1130 aa16.47■□□□□ 0.23
ACTB-204ENST00000425660 AKR1A1P14550 325 aa16.47■□□□□ 0.23
ACTB-204ENST00000425660 STAT1P42224 750 aa16.47■□□□□ 0.23
ACTB-204ENST00000425660 PHKA2P46019 1235 aa16.47■□□□□ 0.23
ACTB-204ENST00000425660 ACOT2P49753 483 aa16.47■□□□□ 0.23
ACTB-204ENST00000425660 VAV2P52735 878 aa16.47■□□□□ 0.23
ACTB-204ENST00000425660 GNG11P61952 73 aa16.47■□□□□ 0.23
ACTB-204ENST00000425660 CYP27A1Q02318 531 aa16.47■□□□□ 0.23
ACTB-204ENST00000425660 SLC18A3Q16572 532 aa16.47■□□□□ 0.23
ACTB-204ENST00000425660 SV2AQ7L0J3 742 aa16.47■□□□□ 0.23
ACTB-204ENST00000425660 CAPNS2Q96L46 248 aa16.47■□□□□ 0.23
ACTB-204ENST00000425660 WDR24Q96S15 920 aa16.47■□□□□ 0.23
ACTB-204ENST00000425660 IRX2Q9BZI1 471 aaPredicted RBP16.47■□□□□ 0.23
ACTB-204ENST00000425660 MINDY3Q9H8M7 445 aa16.47■□□□□ 0.23
ACTB-204ENST00000425660 RBAKQ9NYW8 714 aaPredicted RBP16.47■□□□□ 0.23
ACTB-204ENST00000425660 MGAMO43451 1857 aa16.47■□□□□ 0.23
ACTB-204ENST00000425660 MBLAC1A4D2B0 266 aaPredicted RBP16.47■□□□□ 0.23
ACTB-204ENST00000425660 IQCF3P0C7M6 154 aa16.47■□□□□ 0.23
ACTB-204ENST00000425660 DLATP10515 647 aaKnown RBP16.47■□□□□ 0.23
ACTB-204ENST00000425660 CYBAP13498 195 aa16.47■□□□□ 0.23
ACTB-204ENST00000425660 SOX5P35711 763 aa16.47■□□□□ 0.23
ACTB-204ENST00000425660 MAP2K1Q02750 393 aaPredicted RBP16.47■□□□□ 0.23
ACTB-204ENST00000425660 FBXL13Q8NEE6 735 aa16.47■□□□□ 0.23
ACTB-204ENST00000425660 LMBR1Q8WVP7 490 aa16.47■□□□□ 0.23
ACTB-204ENST00000425660 LENG1Q96BZ8 264 aaPredicted RBP16.47■□□□□ 0.23
ACTB-204ENST00000425660 IFIH1Q9BYX4 1025 aaKnown RBP16.47■□□□□ 0.23
ACTB-204ENST00000425660 L2HGDHQ9H9P8 463 aa16.47■□□□□ 0.23
ACTB-204ENST00000425660 PRMT7Q9NVM4 692 aaPredicted RBP16.47■□□□□ 0.23
ACTB-204ENST00000425660 CNTNAP2Q9UHC6 1331 aa16.46■□□□□ 0.23
ACTB-204ENST00000425660 ZSWIM8A7E2V4 1837 aa16.46■□□□□ 0.23
ACTB-204ENST00000425660 RCCD1A6NED2 376 aa16.46■□□□□ 0.23
ACTB-204ENST00000425660 INO80B-WBP1J3KQ70 363 aa16.46■□□□□ 0.23
ACTB-204ENST00000425660 KRT86O43790 486 aa16.46■□□□□ 0.23
ACTB-204ENST00000425660 DUSP11O75319 330 aaKnown RBP16.46■□□□□ 0.23
ACTB-204ENST00000425660 FERP16591 822 aa16.46■□□□□ 0.23
ACTB-204ENST00000425660 WNT7BP56706 349 aa16.46■□□□□ 0.23
ACTB-204ENST00000425660 PTK2Q05397 1052 aa16.46■□□□□ 0.23
ACTB-204ENST00000425660 GFPT1Q06210 699 aaPredicted RBP16.46■□□□□ 0.23
ACTB-204ENST00000425660 PRPF4BQ13523 1007 aaKnown RBP16.46■□□□□ 0.23
ACTB-204ENST00000425660 DRAP1Q14919 205 aaPredicted RBP16.46■□□□□ 0.23
ACTB-204ENST00000425660 KIAA0753Q2KHM9 967 aa16.46■□□□□ 0.23
ACTB-204ENST00000425660 ZACNQ401N2 412 aa16.46■□□□□ 0.23
ACTB-204ENST00000425660 ZBTB41Q5SVQ8 909 aa16.46■□□□□ 0.23
ACTB-204ENST00000425660 MPZL3Q6UWV2 235 aa16.46■□□□□ 0.23
ACTB-204ENST00000425660 KIAA0319LQ8IZA0 1049 aa16.46■□□□□ 0.23
ACTB-204ENST00000425660 MYRIPQ8NFW9 859 aa16.46■□□□□ 0.23
ACTB-204ENST00000425660 TRIB2Q92519 343 aa16.46■□□□□ 0.23
ACTB-204ENST00000425660 SEMA4DQ92854 862 aa16.46■□□□□ 0.23
ACTB-204ENST00000425660 TSGA10Q9BZW7 698 aa16.46■□□□□ 0.23
ACTB-204ENST00000425660 INO80BQ9C086 356 aaPredicted RBP16.46■□□□□ 0.23
ACTB-204ENST00000425660 LACRTQ9GZZ8 138 aa16.46■□□□□ 0.23
ACTB-204ENST00000425660 TOPORSQ9NS56 1045 aaPredicted RBP16.46■□□□□ 0.23
ACTB-204ENST00000425660 RAB20Q9NX57 234 aa16.46■□□□□ 0.23
ACTB-204ENST00000425660 AKT3Q9Y243 479 aa16.46■□□□□ 0.23
ACTB-204ENST00000425660 TNFSF13BQ9Y275 285 aa16.46■□□□□ 0.23
ACTB-204ENST00000425660 PCDHA13Q9Y5I0 950 aa16.46■□□□□ 0.23
ACTB-204ENST00000425660 RIOK3O14730 519 aaKnown RBP16.45■□□□□ 0.22
ACTB-204ENST00000425660 OGTO15294 1046 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms