RNA–Protein interactions for RNA: ENST00000424846.3

TPM3P9-201, Transcript of tropomyosin 3 pseudogene 9, humanhuman

TSL 1 (best) BASIC

Gene TPM3P9, Length 2,920 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P9-201ENST00000424846 DHX38Q92620 1227 aaKnown RBP15.25■□□□□ 0.03
TPM3P9-201ENST00000424846 ART4Q93070 314 aa15.25■□□□□ 0.03
TPM3P9-201ENST00000424846 NACC1Q96RE7 527 aa15.25■□□□□ 0.03
TPM3P9-201ENST00000424846 NUP85Q9BW27 656 aa15.25■□□□□ 0.03
TPM3P9-201ENST00000424846 CDC42EP4Q9H3Q1 356 aaKnown RBP15.25■□□□□ 0.03
TPM3P9-201ENST00000424846 BAIAP2L1Q9UHR4 511 aa15.25■□□□□ 0.03
TPM3P9-201ENST00000424846 USP21Q9UK80 565 aa15.25■□□□□ 0.03
TPM3P9-201ENST00000424846 SPATA31A6Q5VVP1 1343 aa15.25■□□□□ 0.03
TPM3P9-201ENST00000424846 ARHGEF35A5YM69 484 aa15.24■□□□□ 0.03
TPM3P9-201ENST00000424846 ECM2O94769 699 aaPredicted RBP15.24■□□□□ 0.03
TPM3P9-201ENST00000424846 FMO1Q01740 532 aa15.24■□□□□ 0.03
TPM3P9-201ENST00000424846 MAP2K1Q02750 393 aaPredicted RBP15.24■□□□□ 0.03
TPM3P9-201ENST00000424846 MPP2Q14168 576 aa15.24■□□□□ 0.03
TPM3P9-201ENST00000424846 TNIP1Q15025 636 aa15.24■□□□□ 0.03
TPM3P9-201ENST00000424846 CEP55Q53EZ4 464 aa15.24■□□□□ 0.03
TPM3P9-201ENST00000424846 BTNL9Q6UXG8 535 aa15.24■□□□□ 0.03
TPM3P9-201ENST00000424846 PPM1KQ8N3J5 372 aa15.24■□□□□ 0.03
TPM3P9-201ENST00000424846 FAM118BQ9BPY3 351 aa15.24■□□□□ 0.03
TPM3P9-201ENST00000424846 TMEM117Q9H0C3 514 aa15.24■□□□□ 0.03
TPM3P9-201ENST00000424846 FBXO28Q9NVF7 368 aa15.24■□□□□ 0.03
TPM3P9-201ENST00000424846 FGFR1OP2Q9NVK5 253 aa15.24■□□□□ 0.03
TPM3P9-201ENST00000424846 ZBTB21Q9ULJ3 1066 aa15.24■□□□□ 0.03
TPM3P9-201ENST00000424846 SLC12A4Q9UP95 1085 aa15.24■□□□□ 0.03
TPM3P9-201ENST00000424846 SPOPO43791 374 aa15.24■□□□□ 0.03
TPM3P9-201ENST00000424846 AGTP01019 485 aa15.24■□□□□ 0.03
TPM3P9-201ENST00000424846 BCRP11274 1271 aa15.24■□□□□ 0.03
TPM3P9-201ENST00000424846 KCNJ2P63252 427 aa15.24■□□□□ 0.03
TPM3P9-201ENST00000424846 SEL1L2Q5TEA6 688 aa15.24■□□□□ 0.03
TPM3P9-201ENST00000424846 PADI6Q6TGC4 694 aa15.24■□□□□ 0.03
TPM3P9-201ENST00000424846 COL23A1Q86Y22 540 aaPredicted RBP15.24■□□□□ 0.03
TPM3P9-201ENST00000424846 ZNF564Q8TBZ8 553 aaPredicted RBP15.24■□□□□ 0.03
TPM3P9-201ENST00000424846 IDI2Q9BXS1 227 aa15.24■□□□□ 0.03
TPM3P9-201ENST00000424846 TOPORSQ9NS56 1045 aaPredicted RBP15.24■□□□□ 0.03
TPM3P9-201ENST00000424846 CHST7Q9NS84 486 aa15.24■□□□□ 0.03
TPM3P9-201ENST00000424846 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.24■□□□□ 0.03
TPM3P9-201ENST00000424846 MIF4GDA9UHW6 222 aaKnown RBP15.23■□□□□ 0.03
TPM3P9-201ENST00000424846 ASAP2O43150 1006 aa15.23■□□□□ 0.03
TPM3P9-201ENST00000424846 RTN2O75298 545 aa15.23■□□□□ 0.03
TPM3P9-201ENST00000424846 UBOX5O94941 541 aa15.23■□□□□ 0.03
TPM3P9-201ENST00000424846 ATP6V1G2O95670 118 aa15.23■□□□□ 0.03
TPM3P9-201ENST00000424846 CLTAP09496 248 aa15.23■□□□□ 0.03
TPM3P9-201ENST00000424846 CCDC172P0C7W6 258 aa15.23■□□□□ 0.03
TPM3P9-201ENST00000424846 GHRP10912 638 aa15.23■□□□□ 0.03
TPM3P9-201ENST00000424846 GRIPAP1Q4V328 841 aa15.23■□□□□ 0.03
TPM3P9-201ENST00000424846 C6orf118Q5T5N4 469 aa15.23■□□□□ 0.03
TPM3P9-201ENST00000424846 SEL1LQ9UBV2 794 aa15.23■□□□□ 0.03
TPM3P9-201ENST00000424846 L3MBTL1Q9Y468 752 aa15.23■□□□□ 0.03
TPM3P9-201ENST00000424846 RARGP13631 454 aa15.23■□□□□ 0.03
TPM3P9-201ENST00000424846 ITGB5P18084 799 aa15.23■□□□□ 0.03
TPM3P9-201ENST00000424846 STAT2P52630 851 aa15.23■□□□□ 0.03
TPM3P9-201ENST00000424846 ADCY2Q08462 1091 aa15.23■□□□□ 0.03
TPM3P9-201ENST00000424846 SPP2Q13103 211 aa15.23■□□□□ 0.03
TPM3P9-201ENST00000424846 PPP2R5EQ16537 467 aa15.23■□□□□ 0.03
TPM3P9-201ENST00000424846 ZNF568Q3ZCX4 644 aa15.23■□□□□ 0.03
TPM3P9-201ENST00000424846 MSL1Q68DK7 614 aa15.23■□□□□ 0.03
TPM3P9-201ENST00000424846 VSTM1Q6UX27 236 aa15.23■□□□□ 0.03
TPM3P9-201ENST00000424846 B3GNT9Q6UX72 402 aa15.23■□□□□ 0.03
TPM3P9-201ENST00000424846 TRPM8Q7Z2W7 1104 aa15.23■□□□□ 0.03
TPM3P9-201ENST00000424846 PRUNE1Q86TP1 453 aa15.23■□□□□ 0.03
TPM3P9-201ENST00000424846 PNMA8AQ86V59 439 aaPredicted RBP15.23■□□□□ 0.03
TPM3P9-201ENST00000424846 CBWD2Q8IUF1 395 aa15.23■□□□□ 0.03
TPM3P9-201ENST00000424846 SLC9A9Q8IVB4 645 aa15.23■□□□□ 0.03
TPM3P9-201ENST00000424846 IL31RAQ8NI17 732 aa15.23■□□□□ 0.03
TPM3P9-201ENST00000424846 NOD2Q9HC29 1040 aa15.23■□□□□ 0.03
TPM3P9-201ENST00000424846 HSPBP1Q9NZL4 362 aa15.23■□□□□ 0.03
TPM3P9-201ENST00000424846 MTRF1LQ9UGC7 380 aaKnown RBP15.23■□□□□ 0.03
TPM3P9-201ENST00000424846 CNOT7Q9UIV1 285 aaKnown RBP15.23■□□□□ 0.03
TPM3P9-201ENST00000424846 ODF2LQ9ULJ1 636 aa15.23■□□□□ 0.03
TPM3P9-201ENST00000424846 O00370 1275 aa15.23■□□□□ 0.03
TPM3P9-201ENST00000424846 IPO5O00410 1097 aaKnown RBP15.23■□□□□ 0.03
TPM3P9-201ENST00000424846 VPS41P49754 854 aa15.23■□□□□ 0.03
TPM3P9-201ENST00000424846 DACT2Q5SW24 774 aa15.23■□□□□ 0.03
TPM3P9-201ENST00000424846 RNF207Q6ZRF8 634 aa15.23■□□□□ 0.03
TPM3P9-201ENST00000424846 CYP4X1Q8N118 509 aa15.23■□□□□ 0.03
TPM3P9-201ENST00000424846 ANKRD42Q8N9B4 389 aa15.23■□□□□ 0.03
TPM3P9-201ENST00000424846 N4BP2L2Q92802 583 aaPredicted RBP15.23■□□□□ 0.03
TPM3P9-201ENST00000424846 CCDC127Q96BQ5 260 aa15.23■□□□□ 0.03
TPM3P9-201ENST00000424846 ZNF653Q96CK0 615 aa15.23■□□□□ 0.03
TPM3P9-201ENST00000424846 SAAL1Q96ER3 474 aa15.23■□□□□ 0.03
TPM3P9-201ENST00000424846 KIFC3Q9BVG8 833 aa15.23■□□□□ 0.03
TPM3P9-201ENST00000424846 STK24Q9Y6E0 443 aa15.23■□□□□ 0.03
TPM3P9-201ENST00000424846 TCP11X1B4DZS4 312 aa15.22■□□□□ 0.03
TPM3P9-201ENST00000424846 PODXLO00592 558 aa15.22■□□□□ 0.03
TPM3P9-201ENST00000424846 SNX3O60493 162 aa15.22■□□□□ 0.03
TPM3P9-201ENST00000424846 RPSAP08865 295 aaKnown RBP15.22■□□□□ 0.03
TPM3P9-201ENST00000424846 POLR2MP0CAP2 368 aa15.22■□□□□ 0.03
TPM3P9-201ENST00000424846 CETPP11597 493 aa15.22■□□□□ 0.03
TPM3P9-201ENST00000424846 CYP1B1Q16678 543 aa15.22■□□□□ 0.03
TPM3P9-201ENST00000424846 RBM26Q5T8P6 1007 aaKnown RBP15.22■□□□□ 0.03
TPM3P9-201ENST00000424846 TAX1BP1Q86VP1 789 aa15.22■□□□□ 0.03
TPM3P9-201ENST00000424846 CDAN1Q8IWY9 1227 aa15.22■□□□□ 0.03
TPM3P9-201ENST00000424846 GDAP1Q8TB36 358 aa15.22■□□□□ 0.03
TPM3P9-201ENST00000424846 PNMA3Q9UL41 463 aa15.22■□□□□ 0.03
TPM3P9-201ENST00000424846 UTRNP46939 3433 aa15.22■□□□□ 0.03
TPM3P9-201ENST00000424846 TMEM120BA0PK00 339 aa15.22■□□□□ 0.03
TPM3P9-201ENST00000424846 A8MUI8 341 aa15.22■□□□□ 0.03
TPM3P9-201ENST00000424846 KRT17Q04695 432 aa15.22■□□□□ 0.03
TPM3P9-201ENST00000424846 RASA3Q14644 834 aa15.22■□□□□ 0.03
TPM3P9-201ENST00000424846 ZKSCAN8Q15776 578 aaPredicted RBP15.22■□□□□ 0.03
TPM3P9-201ENST00000424846 MIGA2Q7L4E1 593 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms