RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 SCLT1Q96NL6 688 aa16.33■□□□□ 0.2
C9orf3-204ENST00000424143 ACCSQ96QU6 501 aa16.33■□□□□ 0.2
C9orf3-204ENST00000424143 RIT2Q99578 217 aa16.33■□□□□ 0.2
C9orf3-204ENST00000424143 ARHGEF3Q9NR81 526 aa16.33■□□□□ 0.2
C9orf3-204ENST00000424143 COQ4Q9Y3A0 265 aa16.33■□□□□ 0.2
C9orf3-204ENST00000424143 UBR3Q6ZT12 1888 aa16.32■□□□□ 0.2
C9orf3-204ENST00000424143 SORBS3O60504 671 aa16.32■□□□□ 0.2
C9orf3-204ENST00000424143 PLA2G6O60733 806 aa16.32■□□□□ 0.2
C9orf3-204ENST00000424143 ATP5HO75947 161 aa16.32■□□□□ 0.2
C9orf3-204ENST00000424143 TTC4O95801 387 aa16.32■□□□□ 0.2
C9orf3-204ENST00000424143 TRIM49P0CI25 452 aa16.32■□□□□ 0.2
C9orf3-204ENST00000424143 TRIM49CP0CI26 452 aa16.32■□□□□ 0.2
C9orf3-204ENST00000424143 COPS2P61201 443 aa16.32■□□□□ 0.2
C9orf3-204ENST00000424143 RRP1BQ14684 758 aaKnown RBP16.32■□□□□ 0.2
C9orf3-204ENST00000424143 COG2Q14746 738 aa16.32■□□□□ 0.2
C9orf3-204ENST00000424143 CFAP61Q8NHU2 1237 aa16.32■□□□□ 0.2
C9orf3-204ENST00000424143 EPS8L3Q8TE67 593 aaKnown RBP16.32■□□□□ 0.2
C9orf3-204ENST00000424143 EPS8L1Q8TE68 723 aa16.32■□□□□ 0.2
C9orf3-204ENST00000424143 PIGOQ8TEQ8 1089 aa16.32■□□□□ 0.2
C9orf3-204ENST00000424143 SLC20A1Q8WUM9 679 aa16.32■□□□□ 0.2
C9orf3-204ENST00000424143 SHC3Q92529 594 aa16.32■□□□□ 0.2
C9orf3-204ENST00000424143 WDR18Q9BV38 432 aa16.32■□□□□ 0.2
C9orf3-204ENST00000424143 ZC3H12CQ9C0D7 883 aaKnown RBP16.32■□□□□ 0.2
C9orf3-204ENST00000424143 RXFP1Q9HBX9 757 aa16.32■□□□□ 0.2
C9orf3-204ENST00000424143 AVENQ9NQS1 362 aaPredicted RBP16.32■□□□□ 0.2
C9orf3-204ENST00000424143 AAASQ9NRG9 546 aa16.32■□□□□ 0.2
C9orf3-204ENST00000424143 DBR1Q9UK59 544 aaKnown RBP16.32■□□□□ 0.2
C9orf3-204ENST00000424143 ATRNL1Q5VV63 1379 aa16.32■□□□□ 0.2
C9orf3-204ENST00000424143 EMSYQ7Z589 1322 aa16.32■□□□□ 0.2
C9orf3-204ENST00000424143 SFI1A8K8P3 1242 aa16.31■□□□□ 0.2
C9orf3-204ENST00000424143 PPEF1O14829 653 aaPredicted RBP16.31■□□□□ 0.2
C9orf3-204ENST00000424143 LYPLA2O95372 231 aa16.31■□□□□ 0.2
C9orf3-204ENST00000424143 ABHD2P08910 425 aa16.31■□□□□ 0.2
C9orf3-204ENST00000424143 CHRM1P11229 460 aaPredicted RBP16.31■□□□□ 0.2
C9orf3-204ENST00000424143 GYS1P13807 737 aa16.31■□□□□ 0.2
C9orf3-204ENST00000424143 COPB2P35606 906 aa16.31■□□□□ 0.2
C9orf3-204ENST00000424143 SLC1A1P43005 524 aa16.31■□□□□ 0.2
C9orf3-204ENST00000424143 SPDYAQ5MJ70 313 aa16.31■□□□□ 0.2
C9orf3-204ENST00000424143 VSTM1Q6UX27 236 aa16.31■□□□□ 0.2
C9orf3-204ENST00000424143 PPP1R21Q6ZMI0 780 aa16.31■□□□□ 0.2
C9orf3-204ENST00000424143 FAM196AQ6ZSG2 479 aa16.31■□□□□ 0.2
C9orf3-204ENST00000424143 ASRGL1Q7L266 308 aa16.31■□□□□ 0.2
C9orf3-204ENST00000424143 NIPA1Q7RTP0 329 aa16.31■□□□□ 0.2
C9orf3-204ENST00000424143 SYCP3Q8IZU3 236 aa16.31■□□□□ 0.2
C9orf3-204ENST00000424143 ZNF564Q8TBZ8 553 aaPredicted RBP16.31■□□□□ 0.2
C9orf3-204ENST00000424143 ARHGEF2Q92974 986 aaKnown RBP16.31■□□□□ 0.2
C9orf3-204ENST00000424143 SNF8Q96H20 258 aa16.31■□□□□ 0.2
C9orf3-204ENST00000424143 MAGEB18Q96M61 343 aa16.31■□□□□ 0.2
C9orf3-204ENST00000424143 PCDHB18PQ96TA0 734 aa16.31■□□□□ 0.2
C9orf3-204ENST00000424143 CDC42EP4Q9H3Q1 356 aaKnown RBP16.31■□□□□ 0.2
C9orf3-204ENST00000424143 BCAS3Q9H6U6 928 aa16.31■□□□□ 0.2
C9orf3-204ENST00000424143 SEPT11Q9NVA2 429 aaKnown RBP16.31■□□□□ 0.2
C9orf3-204ENST00000424143 NOP53Q9NZM5 478 aaKnown RBP16.31■□□□□ 0.2
C9orf3-204ENST00000424143 LARSQ9P2J5 1176 aaKnown RBP16.31■□□□□ 0.2
C9orf3-204ENST00000424143 SUFUQ9UMX1 484 aa16.31■□□□□ 0.2
C9orf3-204ENST00000424143 LIN7AO14910 233 aaPredicted RBP16.3■□□□□ 0.2
C9orf3-204ENST00000424143 TP73O15350 636 aa16.3■□□□□ 0.2
C9orf3-204ENST00000424143 MAGEB2O15479 319 aa16.3■□□□□ 0.2
C9orf3-204ENST00000424143 GAS7O60861 476 aa16.3■□□□□ 0.2
C9orf3-204ENST00000424143 VIL1P09327 827 aaKnown RBP16.3■□□□□ 0.2
C9orf3-204ENST00000424143 CCNB1P14635 433 aa16.3■□□□□ 0.2
C9orf3-204ENST00000424143 IVDP26440 423 aa16.3■□□□□ 0.2
C9orf3-204ENST00000424143 HMGB2P26583 209 aaKnown RBP16.3■□□□□ 0.2
C9orf3-204ENST00000424143 GTF2H1P32780 548 aa16.3■□□□□ 0.2
C9orf3-204ENST00000424143 CRKP46108 304 aa16.3■□□□□ 0.2
C9orf3-204ENST00000424143 MARCKSL1P49006 195 aa16.3■□□□□ 0.2
C9orf3-204ENST00000424143 MFAP3P55082 362 aa16.3■□□□□ 0.2
C9orf3-204ENST00000424143 CENPCQ03188 943 aa16.3■□□□□ 0.2
C9orf3-204ENST00000424143 NR1H3Q13133 447 aa16.3■□□□□ 0.2
C9orf3-204ENST00000424143 MESDQ14696 234 aa16.3■□□□□ 0.2
C9orf3-204ENST00000424143 CEP55Q53EZ4 464 aa16.3■□□□□ 0.2
C9orf3-204ENST00000424143 C1orf220Q5T0J3 134 aa16.3■□□□□ 0.2
C9orf3-204ENST00000424143 PTF1AQ7RTS3 328 aa16.3■□□□□ 0.2
C9orf3-204ENST00000424143 ARHGEF19Q8IW93 802 aa16.3■□□□□ 0.2
C9orf3-204ENST00000424143 XXYLT1Q8NBI6 393 aa16.3■□□□□ 0.2
C9orf3-204ENST00000424143 CYP2W1Q8TAV3 490 aa16.3■□□□□ 0.2
C9orf3-204ENST00000424143 C15orf41Q9Y2V0 281 aa16.3■□□□□ 0.2
C9orf3-204ENST00000424143 ADGRA3Q8IWK6 1321 aa16.3■□□□□ 0.2
C9orf3-204ENST00000424143 ARHGEF35A5YM69 484 aa16.3■□□□□ 0.2
C9orf3-204ENST00000424143 UBOX5O94941 541 aa16.3■□□□□ 0.2
C9orf3-204ENST00000424143 POLR2MP0CAP2 368 aa16.3■□□□□ 0.2
C9orf3-204ENST00000424143 GTF2BQ00403 316 aa16.3■□□□□ 0.2
C9orf3-204ENST00000424143 CDR2Q01850 454 aa16.3■□□□□ 0.2
C9orf3-204ENST00000424143 PPP3CAQ08209 521 aa16.3■□□□□ 0.2
C9orf3-204ENST00000424143 NFIAQ12857 509 aa16.3■□□□□ 0.2
C9orf3-204ENST00000424143 RASA3Q14644 834 aa16.3■□□□□ 0.2
C9orf3-204ENST00000424143 STAT4Q14765 748 aa16.3■□□□□ 0.2
C9orf3-204ENST00000424143 ABCB5Q2M3G0 1257 aa16.3■□□□□ 0.2
C9orf3-204ENST00000424143 RNF207Q6ZRF8 634 aa16.3■□□□□ 0.2
C9orf3-204ENST00000424143 RGS9BPQ6ZS82 235 aa16.3■□□□□ 0.2
C9orf3-204ENST00000424143 ARHGEF18Q6ZSZ5 1173 aa16.3■□□□□ 0.2
C9orf3-204ENST00000424143 ENOSF1Q7L5Y1 443 aa16.3■□□□□ 0.2
C9orf3-204ENST00000424143 SPATA21Q7Z572 469 aa16.3■□□□□ 0.2
C9orf3-204ENST00000424143 ADAT2Q7Z6V5 191 aaKnown RBP16.3■□□□□ 0.2
C9orf3-204ENST00000424143 DAW1Q8N136 415 aa16.3■□□□□ 0.2
C9orf3-204ENST00000424143 CNKSR1Q969H4 720 aa16.3■□□□□ 0.2
C9orf3-204ENST00000424143 UIMC1Q96RL1 719 aa16.3■□□□□ 0.2
C9orf3-204ENST00000424143 TRAIPQ9BWF2 469 aa16.3■□□□□ 0.2
C9orf3-204ENST00000424143 TEKT3Q9BXF9 490 aa16.3■□□□□ 0.2
C9orf3-204ENST00000424143 TRIM7Q9C029 511 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms