RNA–Protein interactions for RNA: ENST00000420329.6

CRTC3-202, Transcript of CREB regulated transcription coactivator 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CRTC3, Length 5,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-202ENST00000420329 NYAP2Q9P242 653 aa17.56■□□□□ 0.4
CRTC3-202ENST00000420329 TBXAS1P24557 533 aaPredicted RBP17.55■□□□□ 0.4
CRTC3-202ENST00000420329 INTS5Q6P9B9 1019 aaKnown RBP17.55■□□□□ 0.4
CRTC3-202ENST00000420329 TRPM8Q7Z2W7 1104 aa17.55■□□□□ 0.4
CRTC3-202ENST00000420329 GPD1LQ8N335 351 aa17.55■□□□□ 0.4
CRTC3-202ENST00000420329 DUSP9Q99956 384 aaKnown RBP17.55■□□□□ 0.4
CRTC3-202ENST00000420329 RPF1Q9H9Y2 349 aaKnown RBP17.55■□□□□ 0.4
CRTC3-202ENST00000420329 CHORDC1Q9UHD1 332 aaPredicted RBP17.55■□□□□ 0.4
CRTC3-202ENST00000420329 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.55■□□□□ 0.4
CRTC3-202ENST00000420329 LRRC10BA6NIK2 292 aa17.55■□□□□ 0.4
CRTC3-202ENST00000420329 ITIH2P19823 946 aa17.55■□□□□ 0.4
CRTC3-202ENST00000420329 PON1P27169 355 aa17.55■□□□□ 0.4
CRTC3-202ENST00000420329 MARK3P27448 753 aa17.55■□□□□ 0.4
CRTC3-202ENST00000420329 COG7P83436 770 aa17.55■□□□□ 0.4
CRTC3-202ENST00000420329 KLC2Q9H0B6 622 aa17.55■□□□□ 0.4
CRTC3-202ENST00000420329 SLC24A3Q9HC58 644 aa17.55■□□□□ 0.4
CRTC3-202ENST00000420329 ARFIP2P53365 341 aa17.55■□□□□ 0.4
CRTC3-202ENST00000420329 TFDP2Q14188 446 aa17.55■□□□□ 0.4
CRTC3-202ENST00000420329 SWSAP1Q6NVH7 229 aa17.55■□□□□ 0.4
CRTC3-202ENST00000420329 TRIM72Q6ZMU5 477 aa17.55■□□□□ 0.4
CRTC3-202ENST00000420329 ATP11CQ8NB49 1132 aa17.55■□□□□ 0.4
CRTC3-202ENST00000420329 FGFR1OP2Q9NVK5 253 aa17.55■□□□□ 0.4
CRTC3-202ENST00000420329 KCTD2Q14681 263 aa17.55■□□□□ 0.4
CRTC3-202ENST00000420329 CEP120Q8N960 986 aa17.55■□□□□ 0.4
CRTC3-202ENST00000420329 ADAM33Q9BZ11 813 aa17.55■□□□□ 0.4
CRTC3-202ENST00000420329 G3BP2Q9UN86 482 aaKnown RBP17.55■□□□□ 0.4
CRTC3-202ENST00000420329 UBE4BO95155 1302 aa17.55■□□□□ 0.4
CRTC3-202ENST00000420329 CCT8L1PA6NM43 557 aa17.55■□□□□ 0.4
CRTC3-202ENST00000420329 YWHABP31946 246 aaKnown RBP17.55■□□□□ 0.4
CRTC3-202ENST00000420329 SLC1A1P43005 524 aa17.55■□□□□ 0.4
CRTC3-202ENST00000420329 RAD23BP54727 409 aa17.55■□□□□ 0.4
CRTC3-202ENST00000420329 ZNF699Q32M78 642 aa17.55■□□□□ 0.4
CRTC3-202ENST00000420329 PPM1NQ8N819 430 aa17.55■□□□□ 0.4
CRTC3-202ENST00000420329 TRABDQ9H4I3 376 aa17.55■□□□□ 0.4
CRTC3-202ENST00000420329 QTRT2Q9H974 415 aaKnown RBP17.55■□□□□ 0.4
CRTC3-202ENST00000420329 TMEM120BA0PK00 339 aa17.54■□□□□ 0.4
CRTC3-202ENST00000420329 SPECC1L-ADORA2AF8WAN1 911 aa17.54■□□□□ 0.4
CRTC3-202ENST00000420329 PI4K2BG5E9Z4 385 aa17.54■□□□□ 0.4
CRTC3-202ENST00000420329 EIF3DO15371 548 aaKnown RBP eCLIP17.54■□□□□ 0.4
CRTC3-202ENST00000420329 KRT38O76015 456 aa17.54■□□□□ 0.4
CRTC3-202ENST00000420329 PRR5LQ6MZQ0 368 aa17.54■□□□□ 0.4
CRTC3-202ENST00000420329 CDC42EP5Q6NZY7 148 aa17.54■□□□□ 0.4
CRTC3-202ENST00000420329 WDR75Q8IWA0 830 aaKnown RBP17.54■□□□□ 0.4
CRTC3-202ENST00000420329 CAVIN3Q969G5 261 aa17.54■□□□□ 0.4
CRTC3-202ENST00000420329 NUDCD1Q96RS6 583 aa17.54■□□□□ 0.4
CRTC3-202ENST00000420329 RBM15Q96T37 977 aaKnown RBP eCLIP17.54■□□□□ 0.4
CRTC3-202ENST00000420329 KLHL11Q9NVR0 708 aa17.54■□□□□ 0.4
CRTC3-202ENST00000420329 STRIP2Q9ULQ0 834 aa17.54■□□□□ 0.4
CRTC3-202ENST00000420329 HEY1Q9Y5J3 304 aa17.54■□□□□ 0.4
CRTC3-202ENST00000420329 TAF12Q16514 161 aa17.54■□□□□ 0.4
CRTC3-202ENST00000420329 BARGINQ6ZT62 677 aa17.54■□□□□ 0.4
CRTC3-202ENST00000420329 SEPT12Q8IYM1 358 aa17.54■□□□□ 0.4
CRTC3-202ENST00000420329 HIPK4Q8NE63 616 aa17.54■□□□□ 0.4
CRTC3-202ENST00000420329 PPP1R16BQ96T49 567 aa17.54■□□□□ 0.4
CRTC3-202ENST00000420329 YIPF3Q9GZM5 350 aa17.54■□□□□ 0.4
CRTC3-202ENST00000420329 THAP2Q9H0W7 228 aa17.54■□□□□ 0.4
CRTC3-202ENST00000420329 USH1CQ9Y6N9 552 aa17.54■□□□□ 0.4
CRTC3-202ENST00000420329 ZSCAN5CA6NGD5 496 aaPredicted RBP17.54■□□□□ 0.4
CRTC3-202ENST00000420329 GSTA1P08263 222 aa17.54■□□□□ 0.4
CRTC3-202ENST00000420329 GSTA2P09210 222 aa17.54■□□□□ 0.4
CRTC3-202ENST00000420329 KYNUQ16719 465 aa17.54■□□□□ 0.4
CRTC3-202ENST00000420329 SYDE1Q6ZW31 735 aaPredicted RBP17.54■□□□□ 0.4
CRTC3-202ENST00000420329 PRPF38AQ8NAV1 312 aaKnown RBP17.54■□□□□ 0.4
CRTC3-202ENST00000420329 CFAP69A5D8W1 941 aa17.54■□□□□ 0.4
CRTC3-202ENST00000420329 NLRP7Q8WX94 980 aa17.54■□□□□ 0.4
CRTC3-202ENST00000420329 TSC22D3Q99576 134 aa17.54■□□□□ 0.4
CRTC3-202ENST00000420329 ZNF277Q9NRM2 450 aaPredicted RBP17.54■□□□□ 0.4
CRTC3-202ENST00000420329 RBAKQ9NYW8 714 aaPredicted RBP17.54■□□□□ 0.4
CRTC3-202ENST00000420329 MED24O75448 989 aa17.53■□□□□ 0.4
CRTC3-202ENST00000420329 SLC27A3Q5K4L6 730 aa17.53■□□□□ 0.4
CRTC3-202ENST00000420329 CPA5Q8WXQ8 436 aa17.53■□□□□ 0.4
CRTC3-202ENST00000420329 POLR3FQ9H1D9 316 aaPredicted RBP17.53■□□□□ 0.4
CRTC3-202ENST00000420329 RNF146Q9NTX7 359 aa17.53■□□□□ 0.4
CRTC3-202ENST00000420329 RSPH10B2B2RC85 870 aa17.53■□□□□ 0.4
CRTC3-202ENST00000420329 RSPH10BP0C881 870 aa17.53■□□□□ 0.4
CRTC3-202ENST00000420329 SLC9A2Q9UBY0 812 aa17.53■□□□□ 0.4
CRTC3-202ENST00000420329 PRR12Q9ULL5 1215 aa17.53■□□□□ 0.4
CRTC3-202ENST00000420329 MEI1Q5TIA1 1274 aa17.53■□□□□ 0.4
CRTC3-202ENST00000420329 FOXR1Q6PIV2 292 aa17.53■□□□□ 0.4
CRTC3-202ENST00000420329 EXOC8Q8IYI6 725 aa17.53■□□□□ 0.4
CRTC3-202ENST00000420329 TMBIM4Q9HC24 238 aa17.53■□□□□ 0.4
CRTC3-202ENST00000420329 SENP1Q9P0U3 644 aa17.53■□□□□ 0.4
CRTC3-202ENST00000420329 NOD1Q9Y239 953 aa17.53■□□□□ 0.4
CRTC3-202ENST00000420329 C21orf2O43822 256 aa17.53■□□□□ 0.4
CRTC3-202ENST00000420329 LPXNO60711 386 aa17.53■□□□□ 0.4
CRTC3-202ENST00000420329 KRT7P08729 469 aa17.53■□□□□ 0.4
CRTC3-202ENST00000420329 IFRD2Q12894 506 aaPredicted RBP17.53■□□□□ 0.4
CRTC3-202ENST00000420329 SNRNP35Q16560 246 aaKnown RBP17.53■□□□□ 0.4
CRTC3-202ENST00000420329 PABPC3Q9H361 631 aaKnown RBP17.53■□□□□ 0.4
CRTC3-202ENST00000420329 VCX3AQ9NNX9 186 aa17.53■□□□□ 0.4
CRTC3-202ENST00000420329 PARVAQ9NVD7 372 aa17.53■□□□□ 0.4
CRTC3-202ENST00000420329 TLK1Q9UKI8 766 aa17.53■□□□□ 0.4
CRTC3-202ENST00000420329 AGO2Q9UKV8 859 aaKnown RBP17.53■□□□□ 0.4
CRTC3-202ENST00000420329 GABPAQ06546 454 aa17.52■□□□□ 0.4
CRTC3-202ENST00000420329 MEA1Q16626 185 aa17.52■□□□□ 0.4
CRTC3-202ENST00000420329 P3H1Q32P28 736 aa17.52■□□□□ 0.4
CRTC3-202ENST00000420329 HSP90AA5PQ58FG0 334 aa17.52■□□□□ 0.4
CRTC3-202ENST00000420329 CYFIP1Q7L576 1253 aa17.52■□□□□ 0.4
CRTC3-202ENST00000420329 HACE1Q8IYU2 909 aa17.52■□□□□ 0.4
CRTC3-202ENST00000420329 TMEM117Q9H0C3 514 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms