RNA–Protein interactions for RNA: ENST00000419442.1

RAPGEF1-205, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-205ENST00000419442 FUT10Q6P4F1 479 aa11.8□□□□□ -0.52
RAPGEF1-205ENST00000419442 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.8□□□□□ -0.52
RAPGEF1-205ENST00000419442 TMTC2Q8N394 836 aa11.8□□□□□ -0.52
RAPGEF1-205ENST00000419442 GPR62Q9BZJ7 368 aa11.8□□□□□ -0.52
RAPGEF1-205ENST00000419442 GLT8D2Q9H1C3 349 aa11.8□□□□□ -0.52
RAPGEF1-205ENST00000419442 IFT122Q9HBG6 1241 aa11.8□□□□□ -0.52
RAPGEF1-205ENST00000419442 UBN1Q9NPG3 1134 aa11.8□□□□□ -0.52
RAPGEF1-205ENST00000419442 WASF3Q9UPY6 502 aa11.8□□□□□ -0.52
RAPGEF1-205ENST00000419442 CNTNAP5Q8WYK1 1306 aa11.8□□□□□ -0.52
RAPGEF1-205ENST00000419442 VWA8A3KMH1 1905 aa11.8□□□□□ -0.52
RAPGEF1-205ENST00000419442 ZZEF1O43149 2961 aa11.79□□□□□ -0.52
RAPGEF1-205ENST00000419442 hCG_1984214I3L0E3 225 aa11.79□□□□□ -0.52
RAPGEF1-205ENST00000419442 SH2B2O14492 632 aaPredicted RBP11.79□□□□□ -0.52
RAPGEF1-205ENST00000419442 STBD1O95210 358 aa11.79□□□□□ -0.52
RAPGEF1-205ENST00000419442 KCNK5O95279 499 aa11.79□□□□□ -0.52
RAPGEF1-205ENST00000419442 RPL17P18621 184 aaKnown RBP11.79□□□□□ -0.52
RAPGEF1-205ENST00000419442 HOXA11P31270 313 aaPredicted RBP11.79□□□□□ -0.52
RAPGEF1-205ENST00000419442 LIFRP42702 1097 aa11.79□□□□□ -0.52
RAPGEF1-205ENST00000419442 PTH1RQ03431 593 aa11.79□□□□□ -0.52
RAPGEF1-205ENST00000419442 LRSAM1Q6UWE0 723 aa11.79□□□□□ -0.52
RAPGEF1-205ENST00000419442 FAM160A2Q8N612 972 aaPredicted RBP11.79□□□□□ -0.52
RAPGEF1-205ENST00000419442 ZNF713Q8N859 430 aaPredicted RBP11.79□□□□□ -0.52
RAPGEF1-205ENST00000419442 SMG8Q8ND04 991 aaKnown RBP11.79□□□□□ -0.52
RAPGEF1-205ENST00000419442 CNNM3Q8NE01 707 aa11.79□□□□□ -0.52
RAPGEF1-205ENST00000419442 TMEM87BQ96K49 555 aa11.79□□□□□ -0.52
RAPGEF1-205ENST00000419442 B3GALT6Q96L58 329 aa11.79□□□□□ -0.52
RAPGEF1-205ENST00000419442 COLEC11Q9BWP8 271 aa11.79□□□□□ -0.52
RAPGEF1-205ENST00000419442 LSM14BQ9BX40 385 aaKnown RBP11.79□□□□□ -0.52
RAPGEF1-205ENST00000419442 PLA2G2FQ9BZM2 168 aa11.79□□□□□ -0.52
RAPGEF1-205ENST00000419442 DISC1Q9NRI5 854 aa11.79□□□□□ -0.52
RAPGEF1-205ENST00000419442 MIOSQ9NXC5 875 aa11.79□□□□□ -0.52
RAPGEF1-205ENST00000419442 TCEAL9Q9UHQ7 104 aa11.79□□□□□ -0.52
RAPGEF1-205ENST00000419442 SPEGQ15772 3267 aa11.79□□□□□ -0.52
RAPGEF1-205ENST00000419442 SMCO2A6NFE2 343 aa11.78□□□□□ -0.52
RAPGEF1-205ENST00000419442 CHURC1-FNTBB4DL54 471 aa11.78□□□□□ -0.52
RAPGEF1-205ENST00000419442 K7ESF4 209 aa11.78□□□□□ -0.52
RAPGEF1-205ENST00000419442 XYLBO75191 536 aa11.78□□□□□ -0.52
RAPGEF1-205ENST00000419442 C8AP07357 584 aa11.78□□□□□ -0.52
RAPGEF1-205ENST00000419442 ZNF806P0C7X5 589 aa11.78□□□□□ -0.52
RAPGEF1-205ENST00000419442 CIITAP33076 1130 aa11.78□□□□□ -0.52
RAPGEF1-205ENST00000419442 CXCL12P48061 93 aa11.78□□□□□ -0.52
RAPGEF1-205ENST00000419442 FNTBP49356 437 aa11.78□□□□□ -0.52
RAPGEF1-205ENST00000419442 DNM2P50570 870 aa11.78□□□□□ -0.52
RAPGEF1-205ENST00000419442 SATB1Q01826 763 aa11.78□□□□□ -0.52
RAPGEF1-205ENST00000419442 SRSF5Q13243 272 aaKnown RBP11.78□□□□□ -0.52
RAPGEF1-205ENST00000419442 GAS6Q14393 721 aa11.78□□□□□ -0.52
RAPGEF1-205ENST00000419442 AASDHQ4L235 1098 aaPredicted RBP11.78□□□□□ -0.52
RAPGEF1-205ENST00000419442 PPM1LQ5SGD2 360 aa11.78□□□□□ -0.52
RAPGEF1-205ENST00000419442 STPG1Q5TH74 334 aa11.78□□□□□ -0.52
RAPGEF1-205ENST00000419442 LIN9Q5TKA1 542 aa11.78□□□□□ -0.52
RAPGEF1-205ENST00000419442 POTEHQ6S545 545 aa11.78□□□□□ -0.52
RAPGEF1-205ENST00000419442 LONP2Q86WA8 852 aa11.78□□□□□ -0.52
RAPGEF1-205ENST00000419442 GLYCTKQ8IVS8 523 aa11.78□□□□□ -0.52
RAPGEF1-205ENST00000419442 SMC5Q8IY18 1101 aa11.78□□□□□ -0.52
RAPGEF1-205ENST00000419442 CCDC82Q8N4S0 544 aa11.78□□□□□ -0.52
RAPGEF1-205ENST00000419442 FANCBQ8NB91 859 aa11.78□□□□□ -0.52
RAPGEF1-205ENST00000419442 LENG9Q96B70 501 aa11.78□□□□□ -0.52
RAPGEF1-205ENST00000419442 ELSPBP1Q96BH3 223 aa11.78□□□□□ -0.52
RAPGEF1-205ENST00000419442 LMAN1LQ9HAT1 526 aa11.78□□□□□ -0.52
RAPGEF1-205ENST00000419442 TRPV5Q9NQA5 729 aa11.78□□□□□ -0.52
RAPGEF1-205ENST00000419442 RXFP3Q9NSD7 469 aa11.78□□□□□ -0.52
RAPGEF1-205ENST00000419442 SUCLA2Q9P2R7 463 aaPredicted RBP11.78□□□□□ -0.52
RAPGEF1-205ENST00000419442 SAMM50Q9Y512 469 aa11.78□□□□□ -0.52
RAPGEF1-205ENST00000419442 ARL5CA6NH57 179 aa11.77□□□□□ -0.53
RAPGEF1-205ENST00000419442 CCDC69A6NI79 296 aa11.77□□□□□ -0.53
RAPGEF1-205ENST00000419442 SRRM3A6NNA2 597 aaPredicted RBP11.77□□□□□ -0.53
RAPGEF1-205ENST00000419442 PRC1O43663 620 aa11.77□□□□□ -0.53
RAPGEF1-205ENST00000419442 MAFO75444 373 aaPredicted RBP11.77□□□□□ -0.53
RAPGEF1-205ENST00000419442 NR1I2O75469 434 aa11.77□□□□□ -0.53
RAPGEF1-205ENST00000419442 CHRNB1P11230 501 aa11.77□□□□□ -0.53
RAPGEF1-205ENST00000419442 HOXA6P31267 233 aa11.77□□□□□ -0.53
RAPGEF1-205ENST00000419442 SFNP31947 248 aa11.77□□□□□ -0.53
RAPGEF1-205ENST00000419442 FUT2Q10981 343 aa11.77□□□□□ -0.53
RAPGEF1-205ENST00000419442 SF3A2Q15428 464 aaKnown RBP11.77□□□□□ -0.53
RAPGEF1-205ENST00000419442 MTERF2Q49AM1 385 aa11.77□□□□□ -0.53
RAPGEF1-205ENST00000419442 XKR3Q5GH77 459 aa11.77□□□□□ -0.53
RAPGEF1-205ENST00000419442 CASC1Q6TDU7 716 aa11.77□□□□□ -0.53
RAPGEF1-205ENST00000419442 NFXL1Q6ZNB6 911 aa11.77□□□□□ -0.53
RAPGEF1-205ENST00000419442 RHPN2Q8IUC4 686 aa11.77□□□□□ -0.53
RAPGEF1-205ENST00000419442 KSR1Q8IVT5 923 aa11.77□□□□□ -0.53
RAPGEF1-205ENST00000419442 SPEM1Q8N4L4 309 aa11.77□□□□□ -0.53
RAPGEF1-205ENST00000419442 PIK3R5Q8WYR1 880 aa11.77□□□□□ -0.53
RAPGEF1-205ENST00000419442 LOXL4Q96JB6 756 aa11.77□□□□□ -0.53
RAPGEF1-205ENST00000419442 GAD1Q99259 594 aa11.77□□□□□ -0.53
RAPGEF1-205ENST00000419442 CLSTN3Q9BQT9 956 aa11.77□□□□□ -0.53
RAPGEF1-205ENST00000419442 AVENQ9NQS1 362 aaPredicted RBP11.77□□□□□ -0.53
RAPGEF1-205ENST00000419442 BARHL2Q9NY43 387 aa11.77□□□□□ -0.53
RAPGEF1-205ENST00000419442 GDE1Q9NZC3 331 aa11.77□□□□□ -0.53
RAPGEF1-205ENST00000419442 DNMT3BQ9UBC3 853 aaKnown RBP11.77□□□□□ -0.53
RAPGEF1-205ENST00000419442 ADAM28Q9UKQ2 775 aa11.77□□□□□ -0.53
RAPGEF1-205ENST00000419442 NDRG2Q9UN36 371 aaKnown RBP11.77□□□□□ -0.53
RAPGEF1-205ENST00000419442 EML5Q05BV3 1969 aa11.76□□□□□ -0.53
RAPGEF1-205ENST00000419442 TAF4O00268 1085 aa11.76□□□□□ -0.53
RAPGEF1-205ENST00000419442 CCL16O15467 120 aa11.76□□□□□ -0.53
RAPGEF1-205ENST00000419442 ITGA4P13612 1032 aa11.76□□□□□ -0.53
RAPGEF1-205ENST00000419442 FCARP24071 287 aa11.76□□□□□ -0.53
RAPGEF1-205ENST00000419442 MLH1P40692 756 aa11.76□□□□□ -0.53
RAPGEF1-205ENST00000419442 SCNN1GP51170 649 aa11.76□□□□□ -0.53
RAPGEF1-205ENST00000419442 JAK3P52333 1124 aa11.76□□□□□ -0.53
RAPGEF1-205ENST00000419442 RING1Q06587 406 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms