RNA–Protein interactions for RNA: ENST00000418800.6

DDR1-232, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene DDR1, Length 3,588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-232ENST00000418800 USP21Q9UK80 565 aa12.5□□□□□ -0.41
DDR1-232ENST00000418800 MYH7P12883 1935 aa12.5□□□□□ -0.41
DDR1-232ENST00000418800 ALS2Q96Q42 1657 aa12.49□□□□□ -0.41
DDR1-232ENST00000418800 MAP3K7O43318 606 aa12.49□□□□□ -0.41
DDR1-232ENST00000418800 FESP07332 822 aa12.49□□□□□ -0.41
DDR1-232ENST00000418800 SOX5P35711 763 aa12.49□□□□□ -0.41
DDR1-232ENST00000418800 PSMC2P35998 433 aaKnown RBP12.49□□□□□ -0.41
DDR1-232ENST00000418800 FAM182AQ5T1J6 154 aa12.49□□□□□ -0.41
DDR1-232ENST00000418800 C10orf76Q5T2E6 689 aa12.49□□□□□ -0.41
DDR1-232ENST00000418800 RNF207Q6ZRF8 634 aa12.49□□□□□ -0.41
DDR1-232ENST00000418800 PIGWQ7Z7B1 504 aa12.49□□□□□ -0.41
DDR1-232ENST00000418800 WDR66Q8TBY9 1149 aa12.49□□□□□ -0.41
DDR1-232ENST00000418800 MKNK1Q9BUB5 465 aa12.49□□□□□ -0.41
DDR1-232ENST00000418800 RUSC1Q9BVN2 902 aa12.49□□□□□ -0.41
DDR1-232ENST00000418800 TBC1D10AQ9BXI6 508 aa12.49□□□□□ -0.41
DDR1-232ENST00000418800 CDC42EP4Q9H3Q1 356 aaKnown RBP12.49□□□□□ -0.41
DDR1-232ENST00000418800 ZFP69BQ9UJL9 534 aa12.49□□□□□ -0.41
DDR1-232ENST00000418800 ANKRD63C9JTQ0 380 aa12.49□□□□□ -0.41
DDR1-232ENST00000418800 LCA5LO95447 670 aa12.49□□□□□ -0.41
DDR1-232ENST00000418800 SP100P23497 879 aaPredicted RBP12.49□□□□□ -0.41
DDR1-232ENST00000418800 ZNF572Q7Z3I7 529 aaPredicted RBP12.49□□□□□ -0.41
DDR1-232ENST00000418800 TEX9Q8N6V9 391 aa12.49□□□□□ -0.41
DDR1-232ENST00000418800 CEP70Q8NHQ1 597 aa12.49□□□□□ -0.41
DDR1-232ENST00000418800 CHMP2BQ9UQN3 213 aa12.49□□□□□ -0.41
DDR1-232ENST00000418800 KDM3AQ9Y4C1 1321 aa12.49□□□□□ -0.41
DDR1-232ENST00000418800 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.49□□□□□ -0.41
DDR1-232ENST00000418800 EXOC1LA0A1B0GW35 172 aa12.49□□□□□ -0.41
DDR1-232ENST00000418800 PYGBP11216 843 aa12.49□□□□□ -0.41
DDR1-232ENST00000418800 CETN2P41208 172 aa12.49□□□□□ -0.41
DDR1-232ENST00000418800 COG7P83436 770 aa12.49□□□□□ -0.41
DDR1-232ENST00000418800 AUHQ13825 339 aaKnown RBP12.49□□□□□ -0.41
DDR1-232ENST00000418800 TPTE2Q6XPS3 522 aa12.49□□□□□ -0.41
DDR1-232ENST00000418800 FAM13CQ8NE31 585 aa12.49□□□□□ -0.41
DDR1-232ENST00000418800 CYP2W1Q8TAV3 490 aa12.49□□□□□ -0.41
DDR1-232ENST00000418800 FBXO41Q8TF61 875 aa12.49□□□□□ -0.41
DDR1-232ENST00000418800 NMD3Q96D46 503 aaKnown RBP12.49□□□□□ -0.41
DDR1-232ENST00000418800 MOV10L1Q9BXT6 1211 aaKnown RBP12.49□□□□□ -0.41
DDR1-232ENST00000418800 GANQ9H2C0 597 aa12.49□□□□□ -0.41
DDR1-232ENST00000418800 METTL14Q9HCE5 456 aaKnown RBP12.49□□□□□ -0.41
DDR1-232ENST00000418800 PARP2Q9UGN5 583 aa12.49□□□□□ -0.41
DDR1-232ENST00000418800 PYGMP11217 842 aa12.48□□□□□ -0.41
DDR1-232ENST00000418800 BCRP11274 1271 aa12.48□□□□□ -0.41
DDR1-232ENST00000418800 STRN3Q13033 797 aa12.48□□□□□ -0.41
DDR1-232ENST00000418800 CATSPER3Q86XQ3 398 aa12.48□□□□□ -0.41
DDR1-232ENST00000418800 SCG3Q8WXD2 468 aaKnown RBP12.48□□□□□ -0.41
DDR1-232ENST00000418800 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.48□□□□□ -0.41
DDR1-232ENST00000418800 VCX3BQ9H321 246 aa12.48□□□□□ -0.41
DDR1-232ENST00000418800 VCX3AQ9NNX9 186 aa12.48□□□□□ -0.41
DDR1-232ENST00000418800 MYH7BA7E2Y1 1941 aa12.48□□□□□ -0.41
DDR1-232ENST00000418800 KRT36O76013 467 aa12.48□□□□□ -0.41
DDR1-232ENST00000418800 NTSR2O95665 410 aa12.48□□□□□ -0.41
DDR1-232ENST00000418800 GAS8O95995 478 aa12.48□□□□□ -0.41
DDR1-232ENST00000418800 TPP2P29144 1249 aaPredicted RBP12.48□□□□□ -0.41
DDR1-232ENST00000418800 GSTT1P30711 240 aa12.48□□□□□ -0.41
DDR1-232ENST00000418800 BNIP1Q12981 228 aa12.48□□□□□ -0.41
DDR1-232ENST00000418800 FYB2Q5VWT5 728 aa12.48□□□□□ -0.41
DDR1-232ENST00000418800 LNX1Q8TBB1 728 aaPredicted RBP12.48□□□□□ -0.41
DDR1-232ENST00000418800 KIFAP3Q92845 792 aa12.48□□□□□ -0.41
DDR1-232ENST00000418800 FAM84AQ96KN4 292 aa12.48□□□□□ -0.41
DDR1-232ENST00000418800 FAM161BQ96MY7 647 aa12.48□□□□□ -0.41
DDR1-232ENST00000418800 PLVAPQ9BX97 442 aa12.48□□□□□ -0.41
DDR1-232ENST00000418800 ANKRD2Q9GZV1 360 aa12.48□□□□□ -0.41
DDR1-232ENST00000418800 ZNF711Q9Y462 761 aa12.48□□□□□ -0.41
DDR1-232ENST00000418800 ATRNO75882 1429 aa12.48□□□□□ -0.41
DDR1-232ENST00000418800 KIAA0391O15091 583 aaKnown RBP12.48□□□□□ -0.41
DDR1-232ENST00000418800 CYP26A1O43174 497 aa12.48□□□□□ -0.41
DDR1-232ENST00000418800 RIPK2O43353 540 aa12.48□□□□□ -0.41
DDR1-232ENST00000418800 RNF8O76064 485 aa12.48□□□□□ -0.41
DDR1-232ENST00000418800 HNRNPCP07910 306 aaKnown RBP eCLIP12.48□□□□□ -0.41
DDR1-232ENST00000418800 PTENP60484 403 aa12.48□□□□□ -0.41
DDR1-232ENST00000418800 ZNF804AQ7Z570 1209 aa12.48□□□□□ -0.41
DDR1-232ENST00000418800 ECHDC2Q86YB7 292 aa12.48□□□□□ -0.41
DDR1-232ENST00000418800 FAM81AQ8TBF8 368 aa12.48□□□□□ -0.41
DDR1-232ENST00000418800 SYN2Q92777 582 aaPredicted RBP12.48□□□□□ -0.41
DDR1-232ENST00000418800 RUNDC3BQ96NL0 473 aa12.48□□□□□ -0.41
DDR1-232ENST00000418800 NUP85Q9BW27 656 aa12.48□□□□□ -0.41
DDR1-232ENST00000418800 ZNF148Q9UQR1 794 aa12.48□□□□□ -0.41
DDR1-232ENST00000418800 ARHGAP42A6NI28 874 aa12.47□□□□□ -0.41
DDR1-232ENST00000418800 SRRM3A6NNA2 597 aaPredicted RBP12.47□□□□□ -0.41
DDR1-232ENST00000418800 SORBS3O60504 671 aa12.47□□□□□ -0.41
DDR1-232ENST00000418800 UNC5CO95185 931 aa12.47□□□□□ -0.41
DDR1-232ENST00000418800 NFIXQ14938 502 aa12.47□□□□□ -0.41
DDR1-232ENST00000418800 TAF1BQ53T94 588 aaPredicted RBP12.47□□□□□ -0.41
DDR1-232ENST00000418800 C6orf163Q5TEZ5 329 aa12.47□□□□□ -0.41
DDR1-232ENST00000418800 CCDC62Q6P9F0 684 aa12.47□□□□□ -0.41
DDR1-232ENST00000418800 TLCD1Q96CP7 247 aa12.47□□□□□ -0.41
DDR1-232ENST00000418800 ANO3Q9BYT9 981 aa12.47□□□□□ -0.41
DDR1-232ENST00000418800 SAYSD1Q9NPB0 183 aa12.47□□□□□ -0.41
DDR1-232ENST00000418800 NMRK1Q9NWW6 199 aa12.47□□□□□ -0.41
DDR1-232ENST00000418800 KAT6AQ92794 2004 aa12.47□□□□□ -0.41
DDR1-232ENST00000418800 PI4K2BG5E9Z4 385 aa12.47□□□□□ -0.41
DDR1-232ENST00000418800 PAEPP09466 180 aa12.47□□□□□ -0.41
DDR1-232ENST00000418800 PDIA5Q14554 519 aa12.47□□□□□ -0.41
DDR1-232ENST00000418800 TBC1D9BQ66K14 1250 aa12.47□□□□□ -0.41
DDR1-232ENST00000418800 MTDHQ86UE4 582 aaKnown RBP12.47□□□□□ -0.41
DDR1-232ENST00000418800 LRRC57Q8N9N7 239 aa12.47□□□□□ -0.41
DDR1-232ENST00000418800 HAS1Q92839 578 aa12.47□□□□□ -0.41
DDR1-232ENST00000418800 KAT5Q92993 513 aa12.47□□□□□ -0.41
DDR1-232ENST00000418800 SPZ1Q9BXG8 430 aa12.47□□□□□ -0.41
DDR1-232ENST00000418800 INTS2Q9H0H0 1204 aaKnown RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms