RNA–Protein interactions for RNA: ENST00000418436.5

RFC1-203, Transcript of replication factor C subunit 1, humanhuman

TSL 1 (best)

Gene RFC1, Length 1,255 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-203ENST00000418436 NCLP19338 710 aaKnown RBP11.58□□□□□ -0.56
RFC1-203ENST00000418436 POU3F3P20264 500 aaPredicted RBP11.58□□□□□ -0.56
RFC1-203ENST00000418436 STAT6P42226 847 aa11.58□□□□□ -0.56
RFC1-203ENST00000418436 PRPF4BQ13523 1007 aaKnown RBP11.58□□□□□ -0.56
RFC1-203ENST00000418436 ADGRE1Q14246 886 aa11.58□□□□□ -0.56
RFC1-203ENST00000418436 EPC2Q52LR7 807 aa11.58□□□□□ -0.56
RFC1-203ENST00000418436 TJAP1Q5JTD0 557 aa11.58□□□□□ -0.56
RFC1-203ENST00000418436 AGMOQ6ZNB7 445 aa11.58□□□□□ -0.56
RFC1-203ENST00000418436 SV2BQ7L1I2 683 aa11.58□□□□□ -0.56
RFC1-203ENST00000418436 TAS1R3Q7RTX0 852 aa11.58□□□□□ -0.56
RFC1-203ENST00000418436 TMEM192Q8IY95 271 aa11.58□□□□□ -0.56
RFC1-203ENST00000418436 SMG8Q8ND04 991 aaKnown RBP11.58□□□□□ -0.56
RFC1-203ENST00000418436 CNNM3Q8NE01 707 aa11.58□□□□□ -0.56
RFC1-203ENST00000418436 RSPH1Q8WYR4 309 aa11.58□□□□□ -0.56
RFC1-203ENST00000418436 PGBD4Q96DM1 585 aa11.58□□□□□ -0.56
RFC1-203ENST00000418436 SPATA32Q96LK8 384 aa11.58□□□□□ -0.56
RFC1-203ENST00000418436 EIF2AQ9BY44 585 aaKnown RBP11.58□□□□□ -0.56
RFC1-203ENST00000418436 SCAND2PQ9GZW5 306 aaPredicted RBP11.58□□□□□ -0.56
RFC1-203ENST00000418436 CUEDC2Q9H467 287 aa11.58□□□□□ -0.56
RFC1-203ENST00000418436 LARSQ9P2J5 1176 aaKnown RBP11.58□□□□□ -0.56
RFC1-203ENST00000418436 RWDD3Q9Y3V2 267 aa11.58□□□□□ -0.56
RFC1-203ENST00000418436 MYMKA6NI61 221 aa11.57□□□□□ -0.56
RFC1-203ENST00000418436 TBKBP1A7MCY6 615 aa11.57□□□□□ -0.56
RFC1-203ENST00000418436 MEIS3P2A8K0S8 358 aa11.57□□□□□ -0.56
RFC1-203ENST00000418436 RFXAPO00287 272 aa11.57□□□□□ -0.56
RFC1-203ENST00000418436 SLC16A4O15374 487 aa11.57□□□□□ -0.56
RFC1-203ENST00000418436 OFD1O75665 1012 aa11.57□□□□□ -0.56
RFC1-203ENST00000418436 RB1P06400 928 aa11.57□□□□□ -0.56
RFC1-203ENST00000418436 MAPTP10636 758 aaKnown RBP11.57□□□□□ -0.56
RFC1-203ENST00000418436 IBSPP21815 317 aaPredicted RBP11.57□□□□□ -0.56
RFC1-203ENST00000418436 FECHP22830 423 aa11.57□□□□□ -0.56
RFC1-203ENST00000418436 BMPR1AP36894 532 aa11.57□□□□□ -0.56
RFC1-203ENST00000418436 SMTNP53814 917 aa11.57□□□□□ -0.56
RFC1-203ENST00000418436 NCKAP1LP55160 1127 aa11.57□□□□□ -0.56
RFC1-203ENST00000418436 PAN2Q504Q3 1202 aaKnown RBP11.57□□□□□ -0.56
RFC1-203ENST00000418436 NT5DC1Q5TFE4 455 aa11.57□□□□□ -0.56
RFC1-203ENST00000418436 ADALQ6DHV7 355 aa11.57□□□□□ -0.56
RFC1-203ENST00000418436 SLC27A1Q6PCB7 646 aa11.57□□□□□ -0.56
RFC1-203ENST00000418436 LRRC55Q6ZSA7 311 aa11.57□□□□□ -0.56
RFC1-203ENST00000418436 PDILTQ8N807 584 aa11.57□□□□□ -0.56
RFC1-203ENST00000418436 RNF169Q8NCN4 708 aa11.57□□□□□ -0.56
RFC1-203ENST00000418436 TMEM161BQ8NDZ6 487 aa11.57□□□□□ -0.56
RFC1-203ENST00000418436 LPPQ93052 612 aa11.57□□□□□ -0.56
RFC1-203ENST00000418436 DNAJC19Q96DA6 116 aa11.57□□□□□ -0.56
RFC1-203ENST00000418436 FIZ1Q96SL8 496 aa11.57□□□□□ -0.56
RFC1-203ENST00000418436 PLVAPQ9BX97 442 aa11.57□□□□□ -0.56
RFC1-203ENST00000418436 PDZD7Q9H5P4 517 aa11.57□□□□□ -0.56
RFC1-203ENST00000418436 CWH43Q9H720 699 aa11.57□□□□□ -0.56
RFC1-203ENST00000418436 PARVGQ9HBI0 331 aa11.57□□□□□ -0.56
RFC1-203ENST00000418436 KBTBD4Q9NVX7 518 aa11.57□□□□□ -0.56
RFC1-203ENST00000418436 MTUS1Q9ULD2 1270 aa11.57□□□□□ -0.56
RFC1-203ENST00000418436 IPPQ9Y573 584 aa11.57□□□□□ -0.56
RFC1-203ENST00000418436 TDRD15B5MCY1 1934 aaKnown RBP11.56□□□□□ -0.56
RFC1-203ENST00000418436 ATG2AQ2TAZ0 1938 aa11.56□□□□□ -0.56
RFC1-203ENST00000418436 FAM237AA0A1B0GTK4 181 aa11.56□□□□□ -0.56
RFC1-203ENST00000418436 H3BNC9 293 aa11.56□□□□□ -0.56
RFC1-203ENST00000418436 N4BP3O15049 544 aa11.56□□□□□ -0.56
RFC1-203ENST00000418436 INPPL1O15357 1258 aa11.56□□□□□ -0.56
RFC1-203ENST00000418436 FAM13AO94988 1023 aa11.56□□□□□ -0.56
RFC1-203ENST00000418436 KRT18P05783 430 aaKnown RBP11.56□□□□□ -0.56
RFC1-203ENST00000418436 SCP2P22307 547 aa11.56□□□□□ -0.56
RFC1-203ENST00000418436 CMA1P23946 247 aa11.56□□□□□ -0.56
RFC1-203ENST00000418436 METTL3Q86U44 580 aaKnown RBP11.56□□□□□ -0.56
RFC1-203ENST00000418436 CDR2LQ86X02 465 aaPredicted RBP11.56□□□□□ -0.56
RFC1-203ENST00000418436 ABI1Q8IZP0 508 aa11.56□□□□□ -0.56
RFC1-203ENST00000418436 LRRC43Q8N309 656 aa11.56□□□□□ -0.56
RFC1-203ENST00000418436 IQUBQ8NA54 791 aa11.56□□□□□ -0.56
RFC1-203ENST00000418436 HELQQ8TDG4 1101 aa11.56□□□□□ -0.56
RFC1-203ENST00000418436 P2RX5Q93086 422 aa11.56□□□□□ -0.56
RFC1-203ENST00000418436 GAS2L1Q99501 681 aaPredicted RBP11.56□□□□□ -0.56
RFC1-203ENST00000418436 TNMDQ9H2S6 317 aa11.56□□□□□ -0.56
RFC1-203ENST00000418436 PLXNA4Q9HCM2 1894 aa11.56□□□□□ -0.56
RFC1-203ENST00000418436 PTPRHQ9HD43 1115 aa11.56□□□□□ -0.56
RFC1-203ENST00000418436 UBN1Q9NPG3 1134 aa11.56□□□□□ -0.56
RFC1-203ENST00000418436 TYW1Q9NV66 732 aaKnown RBP11.56□□□□□ -0.56
RFC1-203ENST00000418436 FAM13BQ9NYF5 915 aa11.56□□□□□ -0.56
RFC1-203ENST00000418436 LMCD1Q9NZU5 365 aa11.56□□□□□ -0.56
RFC1-203ENST00000418436 TNFSF13BQ9Y275 285 aa11.56□□□□□ -0.56
RFC1-203ENST00000418436 USP20Q9Y2K6 914 aa11.56□□□□□ -0.56
RFC1-203ENST00000418436 ZMYM2Q9UBW7 1377 aa11.55□□□□□ -0.56
RFC1-203ENST00000418436 FRMD3A2A2Y4 597 aa11.55□□□□□ -0.56
RFC1-203ENST00000418436 H0YCG3 227 aa11.55□□□□□ -0.56
RFC1-203ENST00000418436 TULP1O00294 542 aaPredicted RBP11.55□□□□□ -0.56
RFC1-203ENST00000418436 ABLIM1O14639 778 aa11.55□□□□□ -0.56
RFC1-203ENST00000418436 POLR2DO15514 142 aaKnown RBP11.55□□□□□ -0.56
RFC1-203ENST00000418436 TRAK2O60296 914 aa11.55□□□□□ -0.56
RFC1-203ENST00000418436 TBCAO75347 108 aaKnown RBP11.55□□□□□ -0.56
RFC1-203ENST00000418436 NPTXRO95502 500 aa11.55□□□□□ -0.56
RFC1-203ENST00000418436 ITGA4P13612 1032 aa11.55□□□□□ -0.56
RFC1-203ENST00000418436 FOSL2P15408 326 aa11.55□□□□□ -0.56
RFC1-203ENST00000418436 LIG1P18858 919 aa11.55□□□□□ -0.56
RFC1-203ENST00000418436 PROZP22891 400 aa11.55□□□□□ -0.56
RFC1-203ENST00000418436 CTNNB1P35222 781 aa11.55□□□□□ -0.56
RFC1-203ENST00000418436 ANP32AP39687 249 aaKnown RBP11.55□□□□□ -0.56
RFC1-203ENST00000418436 LONRF3Q496Y0 759 aa11.55□□□□□ -0.56
RFC1-203ENST00000418436 ATF7IP2Q5U623 682 aa11.55□□□□□ -0.56
RFC1-203ENST00000418436 EEF1DP3Q658K8 133 aa11.55□□□□□ -0.56
RFC1-203ENST00000418436 CNNM4Q6P4Q7 775 aa11.55□□□□□ -0.56
RFC1-203ENST00000418436 GLB1LQ6UWU2 654 aa11.55□□□□□ -0.56
RFC1-203ENST00000418436 DYMQ7RTS9 669 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms