RNA–Protein interactions for RNA: ENST00000417641.6

VRK2-203, Transcript of vaccinia related kinase 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK2, Length 2,381 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-203ENST00000417641 INTS2Q9H0H0 1204 aaKnown RBP8.43□□□□□ -1.06
VRK2-203ENST00000417641 WNT8AQ9H1J5 351 aa8.43□□□□□ -1.06
VRK2-203ENST00000417641 TAOK3Q9H2K8 898 aa8.43□□□□□ -1.06
VRK2-203ENST00000417641 IKZF4Q9H2S9 585 aa8.43□□□□□ -1.06
VRK2-203ENST00000417641 ZHX3Q9H4I2 956 aa8.43□□□□□ -1.06
VRK2-203ENST00000417641 PIDD1Q9HB75 910 aa8.43□□□□□ -1.06
VRK2-203ENST00000417641 KCNK9Q9NPC2 374 aa8.43□□□□□ -1.06
VRK2-203ENST00000417641 PAPOLBQ9NRJ5 636 aaKnown RBP8.43□□□□□ -1.06
VRK2-203ENST00000417641 DMAC2Q9NW81 257 aa8.43□□□□□ -1.06
VRK2-203ENST00000417641 NINJ2Q9NZG7 142 aa8.43□□□□□ -1.06
VRK2-203ENST00000417641 PCDHB13Q9Y5F0 798 aa8.43□□□□□ -1.06
VRK2-203ENST00000417641 ARFGEF1Q9Y6D6 1849 aa8.43□□□□□ -1.06
VRK2-203ENST00000417641 MYH14Q7Z406 1995 aaKnown RBP8.43□□□□□ -1.06
VRK2-203ENST00000417641 EIF4E1BA6NMX2 242 aaKnown RBP8.42□□□□□ -1.06
VRK2-203ENST00000417641 FOXN3O00409 490 aaPredicted RBP8.42□□□□□ -1.06
VRK2-203ENST00000417641 FSCN2O14926 492 aa8.42□□□□□ -1.06
VRK2-203ENST00000417641 RTN3O95197 1032 aaPredicted RBP8.42□□□□□ -1.06
VRK2-203ENST00000417641 ACSL3O95573 720 aa8.42□□□□□ -1.06
VRK2-203ENST00000417641 ASMTLO95671 621 aa8.42□□□□□ -1.06
VRK2-203ENST00000417641 KRT18P05783 430 aaKnown RBP8.42□□□□□ -1.06
VRK2-203ENST00000417641 ITIH2P19823 946 aa8.42□□□□□ -1.06
VRK2-203ENST00000417641 SP100P23497 879 aaPredicted RBP8.42□□□□□ -1.06
VRK2-203ENST00000417641 RPA1P27694 616 aa8.42□□□□□ -1.06
VRK2-203ENST00000417641 CNGA1P29973 690 aa8.42□□□□□ -1.06
VRK2-203ENST00000417641 PSMC2P35998 433 aaKnown RBP8.42□□□□□ -1.06
VRK2-203ENST00000417641 GSTO1P78417 241 aa8.42□□□□□ -1.06
VRK2-203ENST00000417641 TRAF1Q13077 416 aa8.42□□□□□ -1.06
VRK2-203ENST00000417641 SNX1Q13596 522 aa8.42□□□□□ -1.06
VRK2-203ENST00000417641 OR52E8Q6IFG1 317 aa8.42□□□□□ -1.06
VRK2-203ENST00000417641 PHLDB3Q6NSJ2 640 aa8.42□□□□□ -1.06
VRK2-203ENST00000417641 MOXD1Q6UVY6 613 aa8.42□□□□□ -1.06
VRK2-203ENST00000417641 ARHGEF18Q6ZSZ5 1173 aa8.42□□□□□ -1.06
VRK2-203ENST00000417641 ADGRF4Q8IZF3 695 aa8.42□□□□□ -1.06
VRK2-203ENST00000417641 WDR66Q8TBY9 1149 aa8.42□□□□□ -1.06
VRK2-203ENST00000417641 SLC20A1Q8WUM9 679 aa8.42□□□□□ -1.06
VRK2-203ENST00000417641 PSPC1Q8WXF1 523 aaKnown RBP8.42□□□□□ -1.06
VRK2-203ENST00000417641 MAML1Q92585 1016 aa8.42□□□□□ -1.06
VRK2-203ENST00000417641 FIZ1Q96SL8 496 aa8.42□□□□□ -1.06
VRK2-203ENST00000417641 TSC22D3Q99576 134 aa8.42□□□□□ -1.06
VRK2-203ENST00000417641 TBC1D10AQ9BXI6 508 aa8.42□□□□□ -1.06
VRK2-203ENST00000417641 CYLDQ9NQC7 956 aa8.42□□□□□ -1.06
VRK2-203ENST00000417641 OLFML3Q9NRN5 406 aa8.42□□□□□ -1.06
VRK2-203ENST00000417641 MTMR4Q9NYA4 1195 aa8.42□□□□□ -1.06
VRK2-203ENST00000417641 NAALADL1Q9UQQ1 740 aa8.42□□□□□ -1.06
VRK2-203ENST00000417641 LRRD1A4D1F6 860 aa8.42□□□□□ -1.06
VRK2-203ENST00000417641 ECEL1O95672 775 aa8.42□□□□□ -1.06
VRK2-203ENST00000417641 FTLP02792 175 aaPredicted RBP8.42□□□□□ -1.06
VRK2-203ENST00000417641 MUTP22033 750 aa8.42□□□□□ -1.06
VRK2-203ENST00000417641 STX2P32856 288 aa8.42□□□□□ -1.06
VRK2-203ENST00000417641 RHBDL3P58872 404 aa8.42□□□□□ -1.06
VRK2-203ENST00000417641 ZNF543Q08ER8 600 aa8.42□□□□□ -1.06
VRK2-203ENST00000417641 PABPC4Q13310 644 aaKnown RBP eCLIP8.42□□□□□ -1.06
VRK2-203ENST00000417641 SLC15A2Q16348 729 aa8.42□□□□□ -1.06
VRK2-203ENST00000417641 SEL1L2Q5TEA6 688 aa8.42□□□□□ -1.06
VRK2-203ENST00000417641 APBB1IPQ7Z5R6 666 aaPredicted RBP8.42□□□□□ -1.06
VRK2-203ENST00000417641 RELL1Q8IUW5 271 aa8.42□□□□□ -1.06
VRK2-203ENST00000417641 LMNTD2Q8IXW0 634 aa8.42□□□□□ -1.06
VRK2-203ENST00000417641 CCDC105Q8IYK2 499 aa8.42□□□□□ -1.06
VRK2-203ENST00000417641 FAM186BQ8IYM0 893 aa8.42□□□□□ -1.06
VRK2-203ENST00000417641 TTC8Q8TAM2 541 aa8.42□□□□□ -1.06
VRK2-203ENST00000417641 ERP27Q96DN0 273 aa8.42□□□□□ -1.06
VRK2-203ENST00000417641 ZNF333Q96JL9 665 aa8.42□□□□□ -1.06
VRK2-203ENST00000417641 UIMC1Q96RL1 719 aa8.42□□□□□ -1.06
VRK2-203ENST00000417641 PCDHB18PQ96TA0 734 aa8.42□□□□□ -1.06
VRK2-203ENST00000417641 DENND2DQ9H6A0 471 aaPredicted RBP8.42□□□□□ -1.06
VRK2-203ENST00000417641 WDR35Q9P2L0 1181 aa8.42□□□□□ -1.06
VRK2-203ENST00000417641 APEX2Q9UBZ4 518 aa8.42□□□□□ -1.06
VRK2-203ENST00000417641 HAO1Q9UJM8 370 aa8.42□□□□□ -1.06
VRK2-203ENST00000417641 NEU2Q9Y3R4 380 aa8.42□□□□□ -1.06
VRK2-203ENST00000417641 USH1CQ9Y6N9 552 aa8.42□□□□□ -1.06
VRK2-203ENST00000417641 DOT1LQ8TEK3 1739 aa8.42□□□□□ -1.06
VRK2-203ENST00000417641 EIF3DO15371 548 aaKnown RBP eCLIP8.41□□□□□ -1.06
VRK2-203ENST00000417641 MARCH6O60337 910 aa8.41□□□□□ -1.06
VRK2-203ENST00000417641 TM4SF1P30408 202 aa8.41□□□□□ -1.06
VRK2-203ENST00000417641 PTDSS1P48651 473 aaKnown RBP8.41□□□□□ -1.06
VRK2-203ENST00000417641 SLC18A1P54219 525 aa8.41□□□□□ -1.06
VRK2-203ENST00000417641 GPC5P78333 572 aa8.41□□□□□ -1.06
VRK2-203ENST00000417641 STRN3Q13033 797 aa8.41□□□□□ -1.06
VRK2-203ENST00000417641 PTK6Q13882 451 aa8.41□□□□□ -1.06
VRK2-203ENST00000417641 KYNUQ16719 465 aa8.41□□□□□ -1.06
VRK2-203ENST00000417641 FOXB2Q5VYV0 432 aa8.41□□□□□ -1.06
VRK2-203ENST00000417641 TRIM68Q6AZZ1 485 aa8.41□□□□□ -1.06
VRK2-203ENST00000417641 TTBK2Q6IQ55 1244 aa8.41□□□□□ -1.06
VRK2-203ENST00000417641 IRGCQ6NXR0 463 aa8.41□□□□□ -1.06
VRK2-203ENST00000417641 PPP1R21Q6ZMI0 780 aa8.41□□□□□ -1.06
VRK2-203ENST00000417641 ZNF804AQ7Z570 1209 aa8.41□□□□□ -1.06
VRK2-203ENST00000417641 LONP2Q86WA8 852 aa8.41□□□□□ -1.06
VRK2-203ENST00000417641 CCDC25Q86WR0 208 aa8.41□□□□□ -1.06
VRK2-203ENST00000417641 C10orf82Q8WW14 230 aa8.41□□□□□ -1.06
VRK2-203ENST00000417641 DNAJC9Q8WXX5 260 aa8.41□□□□□ -1.06
VRK2-203ENST00000417641 LENG9Q96B70 501 aa8.41□□□□□ -1.06
VRK2-203ENST00000417641 P2RX7Q99572 595 aaKnown RBP8.41□□□□□ -1.06
VRK2-203ENST00000417641 PITPNM3Q9BZ71 974 aa8.41□□□□□ -1.06
VRK2-203ENST00000417641 KIAA1683Q9H0B3 1180 aa8.41□□□□□ -1.06
VRK2-203ENST00000417641 CTTNBP2NLQ9P2B4 639 aa8.41□□□□□ -1.06
VRK2-203ENST00000417641 MTUS1Q9ULD2 1270 aa8.41□□□□□ -1.06
VRK2-203ENST00000417641 PTPN22Q9Y2R2 807 aa8.41□□□□□ -1.06
VRK2-203ENST00000417641 LOC102724428A0A0B4J2F2 783 aa8.41□□□□□ -1.06
VRK2-203ENST00000417641 MEIS1O00470 390 aa8.41□□□□□ -1.06
VRK2-203ENST00000417641 SORBS3O60504 671 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms