RNA–Protein interactions for RNA: ENST00000417521.5

DDR1-231, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5

Gene DDR1, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-231	ENST00000417521	PEX3	P56589	373 aa		18.04	■□□□□ 0.48
DDR1-231	ENST00000417521	MAPK7	Q13164	816 aa		18.04	■□□□□ 0.48
DDR1-231	ENST00000417521	DMP1	Q13316	513 aa	Predicted RBP	18.04	■□□□□ 0.48
DDR1-231	ENST00000417521	SMC1A	Q14683	1233 aa	Known RBP	18.04	■□□□□ 0.48
DDR1-231	ENST00000417521	TMEM132A	Q24JP5	1023 aa		18.04	■□□□□ 0.48
DDR1-231	ENST00000417521	VPS52	Q8N1B4	723 aa		18.04	■□□□□ 0.48
DDR1-231	ENST00000417521	CALML4	Q96GE6	196 aa		18.04	■□□□□ 0.48
DDR1-231	ENST00000417521	PLIN2	Q99541	437 aa		18.04	■□□□□ 0.48
DDR1-231	ENST00000417521	ADPGK	Q9BRR6	497 aa		18.04	■□□□□ 0.48
DDR1-231	ENST00000417521	NTPCR	Q9BSD7	190 aa	Known RBP	18.04	■□□□□ 0.48
DDR1-231	ENST00000417521	KIFC3	Q9BVG8	833 aa		18.04	■□□□□ 0.48
DDR1-231	ENST00000417521	APOL6	Q9BWW8	343 aa		18.04	■□□□□ 0.48
DDR1-231	ENST00000417521	TMEM134	Q9H6X4	195 aa		18.04	■□□□□ 0.48
DDR1-231	ENST00000417521	CD207	Q9UJ71	328 aa		18.04	■□□□□ 0.48
DDR1-231	ENST00000417521	IRAK3	Q9Y616	596 aa		18.04	■□□□□ 0.48
DDR1-231	ENST00000417521	CCDC169	A6NNP5	214 aa		18.03	■□□□□ 0.48
DDR1-231	ENST00000417521	NRP1	O14786	923 aa		18.03	■□□□□ 0.48
DDR1-231	ENST00000417521	GLP2R	O95838	553 aa		18.03	■□□□□ 0.48
DDR1-231	ENST00000417521	SSB	P05455	408 aa	Known RBP eCLIP	18.03	■□□□□ 0.48
DDR1-231	ENST00000417521	PLA2G4B	P0C869	781 aa		18.03	■□□□□ 0.48
DDR1-231	ENST00000417521	LIG1	P18858	919 aa		18.03	■□□□□ 0.48
DDR1-231	ENST00000417521	AKAP5	P24588	427 aa		18.03	■□□□□ 0.48
DDR1-231	ENST00000417521	SCNN1G	P51170	649 aa		18.03	■□□□□ 0.48
DDR1-231	ENST00000417521	SLC12A3	P55017	1021 aa		18.03	■□□□□ 0.48
DDR1-231	ENST00000417521	DSC1	Q08554	894 aa		18.03	■□□□□ 0.48
DDR1-231	ENST00000417521	COASY	Q13057	564 aa		18.03	■□□□□ 0.48
DDR1-231	ENST00000417521	KCNC3	Q14003	757 aa		18.03	■□□□□ 0.48
DDR1-231	ENST00000417521	TMEM184A	Q6ZMB5	413 aa		18.03	■□□□□ 0.48
DDR1-231	ENST00000417521	COLGALT2	Q8IYK4	626 aa		18.03	■□□□□ 0.48
DDR1-231	ENST00000417521	BCL7C	Q8WUZ0	217 aa	Predicted RBP	18.03	■□□□□ 0.48
DDR1-231	ENST00000417521	ZFP42	Q96MM3	310 aa		18.03	■□□□□ 0.48
DDR1-231	ENST00000417521	ZBP1	Q9H171	429 aa		18.03	■□□□□ 0.48
DDR1-231	ENST00000417521	MIOS	Q9NXC5	875 aa		18.03	■□□□□ 0.48
DDR1-231	ENST00000417521	CHMP5	Q9NZZ3	219 aa		18.03	■□□□□ 0.48
DDR1-231	ENST00000417521	PARP2	Q9UGN5	583 aa		18.03	■□□□□ 0.48
DDR1-231	ENST00000417521	C2orf71	A6NGG8	1288 aa		18.02	■□□□□ 0.48
DDR1-231	ENST00000417521	MBTPS2	O43462	519 aa		18.02	■□□□□ 0.48
DDR1-231	ENST00000417521	NR1I2	O75469	434 aa		18.02	■□□□□ 0.48
DDR1-231	ENST00000417521	CXCL14	O95715	111 aa		18.02	■□□□□ 0.48
DDR1-231	ENST00000417521	EDN1	P05305	212 aa		18.02	■□□□□ 0.48
DDR1-231	ENST00000417521	SRGAP2B	P0DMP2	458 aa		18.02	■□□□□ 0.48
DDR1-231	ENST00000417521	CTSA	P10619	480 aa		18.02	■□□□□ 0.48
DDR1-231	ENST00000417521	MARCKS	P29966	332 aa	Predicted RBP	18.02	■□□□□ 0.48
DDR1-231	ENST00000417521	NASP	P49321	788 aa	Predicted RBP	18.02	■□□□□ 0.48
DDR1-231	ENST00000417521	GRIN1	Q05586	938 aa		18.02	■□□□□ 0.48
DDR1-231	ENST00000417521	SMAD4	Q13485	552 aa	Known RBP	18.02	■□□□□ 0.48
DDR1-231	ENST00000417521	GIT2	Q14161	759 aa		18.02	■□□□□ 0.48
DDR1-231	ENST00000417521	SMAD2	Q15796	467 aa	Known RBP	18.02	■□□□□ 0.48
DDR1-231	ENST00000417521	GSTCD	Q8NEC7	633 aa		18.02	■□□□□ 0.48
DDR1-231	ENST00000417521	SPIRE2	Q8WWL2	714 aa		18.02	■□□□□ 0.48
DDR1-231	ENST00000417521	FAM122A	Q96E09	287 aa		18.02	■□□□□ 0.48
DDR1-231	ENST00000417521	KMT5A	Q9NQR1	393 aa		18.02	■□□□□ 0.48
DDR1-231	ENST00000417521	ARHGAP28	Q9P2N2	729 aa		18.02	■□□□□ 0.48
DDR1-231	ENST00000417521	PRKAG3	Q9UGI9	489 aa		18.02	■□□□□ 0.48
DDR1-231	ENST00000417521	NCOR1	O75376	2440 aa		18.02	■□□□□ 0.48
DDR1-231	ENST00000417521	BDP1	A6H8Y1	2624 aa		18.02	■□□□□ 0.47
DDR1-231	ENST00000417521	ARID2	Q68CP9	1835 aa		18.01	■□□□□ 0.47
DDR1-231	ENST00000417521	SLC39A14	Q15043	492 aa		18.01	■□□□□ 0.47
DDR1-231	ENST00000417521	CLUL1	Q15846	466 aa		18.01	■□□□□ 0.47
DDR1-231	ENST00000417521	DCAF4L1	Q3SXM0	396 aa		18.01	■□□□□ 0.47
DDR1-231	ENST00000417521	NT5DC1	Q5TFE4	455 aa		18.01	■□□□□ 0.47
DDR1-231	ENST00000417521	ATF7IP2	Q5U623	682 aa		18.01	■□□□□ 0.47
DDR1-231	ENST00000417521	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	18.01	■□□□□ 0.47
DDR1-231	ENST00000417521	SMRP1	Q8NCR6	262 aa		18.01	■□□□□ 0.47
DDR1-231	ENST00000417521	VN1R2	Q8NFZ6	395 aa		18.01	■□□□□ 0.47
DDR1-231	ENST00000417521	BARX2	Q9UMQ3	279 aa	Predicted RBP	18.01	■□□□□ 0.47
DDR1-231	ENST00000417521	TNFSF13B	Q9Y275	285 aa		18.01	■□□□□ 0.47
DDR1-231	ENST00000417521	USP20	Q9Y2K6	914 aa		18.01	■□□□□ 0.47
DDR1-231	ENST00000417521	ATP6V1D	Q9Y5K8	247 aa		18.01	■□□□□ 0.47
DDR1-231	ENST00000417521	SFI1	A8K8P3	1242 aa		18.01	■□□□□ 0.47
DDR1-231	ENST00000417521	PLS3	P13797	630 aa		18.01	■□□□□ 0.47
DDR1-231	ENST00000417521	OR1G1	P47890	313 aa		18.01	■□□□□ 0.47
DDR1-231	ENST00000417521	SMTN	P53814	917 aa		18.01	■□□□□ 0.47
DDR1-231	ENST00000417521	GRIK3	Q13003	919 aa		18.01	■□□□□ 0.47
DDR1-231	ENST00000417521	STK38	Q15208	465 aa		18.01	■□□□□ 0.47
DDR1-231	ENST00000417521	EEF1DP3	Q658K8	133 aa		18.01	■□□□□ 0.47
DDR1-231	ENST00000417521	GJD3	Q8N144	294 aa		18.01	■□□□□ 0.47
DDR1-231	ENST00000417521	LINC00301	Q8NCQ3	95 aa		18.01	■□□□□ 0.47
DDR1-231	ENST00000417521	RPS6KC1	Q96S38	1066 aa		18.01	■□□□□ 0.47
DDR1-231	ENST00000417521	CCSER1	Q9C0I3	900 aa		18.01	■□□□□ 0.47
DDR1-231	ENST00000417521	SNTG2	Q9NY99	539 aa		18.01	■□□□□ 0.47
DDR1-231	ENST00000417521	KLK14	Q9P0G3	267 aa		18.01	■□□□□ 0.47
DDR1-231	ENST00000417521	SRPRB	Q9Y5M8	271 aa	Known RBP	18.01	■□□□□ 0.47
DDR1-231	ENST00000417521	MORC2	Q9Y6X9	1032 aa	Predicted RBP	18.01	■□□□□ 0.47
DDR1-231	ENST00000417521	RAD51AP2	Q09MP3	1159 aa		18	■□□□□ 0.47
DDR1-231	ENST00000417521	ARSH	Q5FYA8	562 aa		18	■□□□□ 0.47
DDR1-231	ENST00000417521	ATL3	Q6DD88	541 aa		18	■□□□□ 0.47
DDR1-231	ENST00000417521	ACO2	Q99798	780 aa	Known RBP	18	■□□□□ 0.47
DDR1-231	ENST00000417521	COLEC11	Q9BWP8	271 aa		18	■□□□□ 0.47
DDR1-231	ENST00000417521	VN1R3	Q9BXE9	311 aa		18	■□□□□ 0.47
DDR1-231	ENST00000417521	MRPL4	Q9BYD3	311 aa	Known RBP	18	■□□□□ 0.47
DDR1-231	ENST00000417521	LARS	Q9P2J5	1176 aa	Known RBP	18	■□□□□ 0.47
DDR1-231	ENST00000417521	FBXO2	Q9UK22	296 aa	Predicted RBP	18	■□□□□ 0.47
DDR1-231	ENST00000417521	CFAP45	Q9UL16	551 aa		18	■□□□□ 0.47
DDR1-231	ENST00000417521	ODF2L	Q9ULJ1	636 aa		18	■□□□□ 0.47
DDR1-231	ENST00000417521	PRG3	Q9Y2Y8	225 aa	Predicted RBP	18	■□□□□ 0.47
DDR1-231	ENST00000417521	TCHH	Q07283	1943 aa		17.99	■□□□□ 0.47
DDR1-231	ENST00000417521	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	17.99	■□□□□ 0.47
DDR1-231	ENST00000417521	SPTLC2	O15270	562 aa		17.99	■□□□□ 0.47
DDR1-231	ENST00000417521	YEATS4	O95619	227 aa		17.99	■□□□□ 0.47

Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms