RNA–Protein interactions for RNA: ENST00000416721.6

RBFOX2-208, Transcript of RNA binding fox-1 homolog 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RBFOX2, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX2-208ENST00000416721 ME3Q16798 604 aa12.16□□□□□ -0.46
RBFOX2-208ENST00000416721 ASTLQ6HA08 431 aaPredicted RBP12.16□□□□□ -0.46
RBFOX2-208ENST00000416721 COLGALT2Q8IYK4 626 aa12.16□□□□□ -0.46
RBFOX2-208ENST00000416721 SIX5Q8N196 739 aa12.16□□□□□ -0.46
RBFOX2-208ENST00000416721 TMEM105Q8N8V8 129 aa12.16□□□□□ -0.46
RBFOX2-208ENST00000416721 HASPINQ8TF76 798 aa12.16□□□□□ -0.46
RBFOX2-208ENST00000416721 RSAD2Q8WXG1 361 aa12.16□□□□□ -0.46
RBFOX2-208ENST00000416721 SMG7Q92540 1137 aaKnown RBP12.16□□□□□ -0.46
RBFOX2-208ENST00000416721 STAMQ92783 540 aa12.16□□□□□ -0.46
RBFOX2-208ENST00000416721 KCNK12Q9HB15 430 aa12.16□□□□□ -0.46
RBFOX2-208ENST00000416721 GPRC5CQ9NQ84 441 aa12.16□□□□□ -0.46
RBFOX2-208ENST00000416721 XPNPEP1Q9NQW7 623 aa12.16□□□□□ -0.46
RBFOX2-208ENST00000416721 ANKEF1Q9NU02 776 aa12.16□□□□□ -0.46
RBFOX2-208ENST00000416721 POLIQ9UNA4 740 aa12.16□□□□□ -0.46
RBFOX2-208ENST00000416721 POTEMA6NI47 508 aa12.15□□□□□ -0.46
RBFOX2-208ENST00000416721 ST18O60284 1047 aa12.15□□□□□ -0.46
RBFOX2-208ENST00000416721 LARGE1O95461 756 aa12.15□□□□□ -0.46
RBFOX2-208ENST00000416721 FDPSP14324 419 aaKnown RBP12.15□□□□□ -0.46
RBFOX2-208ENST00000416721 GLRA2P23416 452 aa12.15□□□□□ -0.46
RBFOX2-208ENST00000416721 SPIRE1Q08AE8 756 aa12.15□□□□□ -0.46
RBFOX2-208ENST00000416721 USP41Q3LFD5 358 aa12.15□□□□□ -0.46
RBFOX2-208ENST00000416721 SLC27A1Q6PCB7 646 aa12.15□□□□□ -0.46
RBFOX2-208ENST00000416721 ZBTB8OSQ8IWT0 167 aa12.15□□□□□ -0.46
RBFOX2-208ENST00000416721 CCDC51Q96ER9 411 aa12.15□□□□□ -0.46
RBFOX2-208ENST00000416721 HSD17B14Q9BPX1 270 aa12.15□□□□□ -0.46
RBFOX2-208ENST00000416721 HERC2P3Q9BVR0 1158 aa12.15□□□□□ -0.46
RBFOX2-208ENST00000416721 POLD4Q9HCU8 107 aa12.15□□□□□ -0.46
RBFOX2-208ENST00000416721 MARCH5Q9NX47 278 aa12.15□□□□□ -0.46
RBFOX2-208ENST00000416721 CACNG4Q9UBN1 327 aa12.15□□□□□ -0.46
RBFOX2-208ENST00000416721 GIT1Q9Y2X7 761 aa12.15□□□□□ -0.46
RBFOX2-208ENST00000416721 TECTAO75443 2155 aa12.15□□□□□ -0.47
RBFOX2-208ENST00000416721 MYH9P35579 1960 aaKnown RBP12.14□□□□□ -0.47
RBFOX2-208ENST00000416721 CASTOR2A6NHX0 329 aa12.14□□□□□ -0.47
RBFOX2-208ENST00000416721 NARSO43776 548 aaKnown RBP12.14□□□□□ -0.47
RBFOX2-208ENST00000416721 LILRB3O75022 631 aa12.14□□□□□ -0.47
RBFOX2-208ENST00000416721 ARL2P36404 184 aa12.14□□□□□ -0.47
RBFOX2-208ENST00000416721 RARRES1P49788 294 aa12.14□□□□□ -0.47
RBFOX2-208ENST00000416721 PCBP1Q15365 356 aaKnown RBP eCLIP12.14□□□□□ -0.47
RBFOX2-208ENST00000416721 ZNF174Q15697 407 aa12.14□□□□□ -0.47
RBFOX2-208ENST00000416721 SPECC1Q5M775 1068 aa12.14□□□□□ -0.47
RBFOX2-208ENST00000416721 FUT10Q6P4F1 479 aa12.14□□□□□ -0.47
RBFOX2-208ENST00000416721 PRSS55Q6UWB4 352 aaPredicted RBP12.14□□□□□ -0.47
RBFOX2-208ENST00000416721 GET4Q7L5D6 327 aaPredicted RBP12.14□□□□□ -0.47
RBFOX2-208ENST00000416721 KCNG4Q8TDN1 519 aa12.14□□□□□ -0.47
RBFOX2-208ENST00000416721 GTF3C6Q969F1 213 aa12.14□□□□□ -0.47
RBFOX2-208ENST00000416721 GPR62Q9BZJ7 368 aa12.14□□□□□ -0.47
RBFOX2-208ENST00000416721 ADAM28Q9UKQ2 775 aa12.14□□□□□ -0.47
RBFOX2-208ENST00000416721 CA14Q9ULX7 337 aa12.14□□□□□ -0.47
RBFOX2-208ENST00000416721 USP20Q9Y2K6 914 aa12.14□□□□□ -0.47
RBFOX2-208ENST00000416721 GDAQ9Y2T3 454 aa12.14□□□□□ -0.47
RBFOX2-208ENST00000416721 ZFHX2Q9C0A1 2572 aaPredicted RBP12.13□□□□□ -0.47
RBFOX2-208ENST00000416721 ARHGEF35A5YM69 484 aa12.13□□□□□ -0.47
RBFOX2-208ENST00000416721 WNT7AO00755 349 aa12.13□□□□□ -0.47
RBFOX2-208ENST00000416721 TGM5O43548 720 aa12.13□□□□□ -0.47
RBFOX2-208ENST00000416721 PI15O43692 258 aa12.13□□□□□ -0.47
RBFOX2-208ENST00000416721 ANAPC15P60006 121 aa12.13□□□□□ -0.47
RBFOX2-208ENST00000416721 DSG1Q02413 1049 aa12.13□□□□□ -0.47
RBFOX2-208ENST00000416721 PRPF4BQ13523 1007 aaKnown RBP12.13□□□□□ -0.47
RBFOX2-208ENST00000416721 FAM171A1Q5VUB5 890 aa12.13□□□□□ -0.47
RBFOX2-208ENST00000416721 KIAA0319Q5VV43 1072 aa12.13□□□□□ -0.47
RBFOX2-208ENST00000416721 C15orf39Q6ZRI6 1047 aa12.13□□□□□ -0.47
RBFOX2-208ENST00000416721 FRMD5Q7Z6J6 570 aa12.13□□□□□ -0.47
RBFOX2-208ENST00000416721 NOSTRINQ8IVI9 506 aa12.13□□□□□ -0.47
RBFOX2-208ENST00000416721 NSUN7Q8NE18 718 aaKnown RBP12.13□□□□□ -0.47
RBFOX2-208ENST00000416721 ERMNQ8TAM6 284 aa12.13□□□□□ -0.47
RBFOX2-208ENST00000416721 DEPTORQ8TB45 409 aa12.13□□□□□ -0.47
RBFOX2-208ENST00000416721 NACC1Q96RE7 527 aa12.13□□□□□ -0.47
RBFOX2-208ENST00000416721 SNTG2Q9NY99 539 aa12.13□□□□□ -0.47
RBFOX2-208ENST00000416721 CLUHO75153 1309 aa12.12□□□□□ -0.47
RBFOX2-208ENST00000416721 LYPLA2O95372 231 aa12.12□□□□□ -0.47
RBFOX2-208ENST00000416721 CLCN5P51795 746 aa12.12□□□□□ -0.47
RBFOX2-208ENST00000416721 DSC1Q08554 894 aa12.12□□□□□ -0.47
RBFOX2-208ENST00000416721 GRIK3Q13003 919 aa12.12□□□□□ -0.47
RBFOX2-208ENST00000416721 HSP90AA2PQ14568 343 aaPredicted RBP12.12□□□□□ -0.47
RBFOX2-208ENST00000416721 AMHR2Q16671 573 aa12.12□□□□□ -0.47
RBFOX2-208ENST00000416721 POTEGQ6S5H5 508 aa12.12□□□□□ -0.47
RBFOX2-208ENST00000416721 CATSPER3Q86XQ3 398 aa12.12□□□□□ -0.47
RBFOX2-208ENST00000416721 MCPH1Q8NEM0 835 aa12.12□□□□□ -0.47
RBFOX2-208ENST00000416721 TNFRSF25Q93038 417 aa12.12□□□□□ -0.47
RBFOX2-208ENST00000416721 C8orf76Q96K31 380 aa12.12□□□□□ -0.47
RBFOX2-208ENST00000416721 MYADMQ96S97 322 aa12.12□□□□□ -0.47
RBFOX2-208ENST00000416721 PAAF1Q9BRP4 392 aa12.12□□□□□ -0.47
RBFOX2-208ENST00000416721 ADPGKQ9BRR6 497 aa12.12□□□□□ -0.47
RBFOX2-208ENST00000416721 TMEM60Q9H2L4 133 aa12.12□□□□□ -0.47
RBFOX2-208ENST00000416721 WDR6Q9NNW5 1121 aaKnown RBP12.12□□□□□ -0.47
RBFOX2-208ENST00000416721 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.12□□□□□ -0.472e-6■■□□□ 14.5
RBFOX2-208ENST00000416721 PRMT7Q9NVM4 692 aaPredicted RBP12.12□□□□□ -0.47
RBFOX2-208ENST00000416721 IGSF9Q9P2J2 1179 aa12.12□□□□□ -0.47
RBFOX2-208ENST00000416721 SF3B1O75533 1304 aaKnown RBP eCLIP12.11□□□□□ -0.47
RBFOX2-208ENST00000416721 A0A1B0GUA9 196 aa12.11□□□□□ -0.47
RBFOX2-208ENST00000416721 N4BP3O15049 544 aa12.11□□□□□ -0.47
RBFOX2-208ENST00000416721 N4BP1O75113 896 aaKnown RBP12.11□□□□□ -0.47
RBFOX2-208ENST00000416721 MED24O75448 989 aa12.11□□□□□ -0.47
RBFOX2-208ENST00000416721 PRKCBP05771 671 aa12.11□□□□□ -0.47
RBFOX2-208ENST00000416721 THP07101 528 aa12.11□□□□□ -0.47
RBFOX2-208ENST00000416721 CCT6AP40227 531 aaKnown RBP12.11□□□□□ -0.47
RBFOX2-208ENST00000416721 NUBP1P53384 320 aa12.11□□□□□ -0.47
RBFOX2-208ENST00000416721 POU5F1BQ06416 359 aa12.11□□□□□ -0.47
RBFOX2-208ENST00000416721 ZRSR1Q15695 479 aaKnown RBP12.11□□□□□ -0.47
RBFOX2-208ENST00000416721 MAPK6Q16659 721 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms