RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 KRT35Q92764 455 aa10.53□□□□□ -0.72
CD44-206ENST00000415148 CD101Q93033 1021 aa10.53□□□□□ -0.72
CD44-206ENST00000415148 ART4Q93070 314 aa10.53□□□□□ -0.72
CD44-206ENST00000415148 ACCSQ96QU6 501 aa10.53□□□□□ -0.72
CD44-206ENST00000415148 PRMT1Q99873 361 aaKnown RBP10.53□□□□□ -0.72
CD44-206ENST00000415148 DEFB129Q9H1M3 183 aa10.53□□□□□ -0.72
CD44-206ENST00000415148 UNC45AQ9H3U1 944 aa10.53□□□□□ -0.72
CD44-206ENST00000415148 ARHGEF10LQ9HCE6 1279 aa10.53□□□□□ -0.72
CD44-206ENST00000415148 ABCF3Q9NUQ8 709 aa10.53□□□□□ -0.72
CD44-206ENST00000415148 DONSONQ9NYP3 566 aa10.53□□□□□ -0.72
CD44-206ENST00000415148 EMSYQ7Z589 1322 aa10.52□□□□□ -0.72
CD44-206ENST00000415148 CHMP2AO43633 222 aa10.52□□□□□ -0.73
CD44-206ENST00000415148 HIP1RO75146 1068 aa10.52□□□□□ -0.73
CD44-206ENST00000415148 ATP6V1G2O95670 118 aa10.52□□□□□ -0.73
CD44-206ENST00000415148 FGFR4P22455 802 aa10.52□□□□□ -0.73
CD44-206ENST00000415148 RPL21P46778 160 aaKnown RBP10.52□□□□□ -0.73
CD44-206ENST00000415148 MFSD5Q6N075 450 aa10.52□□□□□ -0.73
CD44-206ENST00000415148 TTC27Q6P3X3 843 aa10.52□□□□□ -0.73
CD44-206ENST00000415148 CCDC137Q6PK04 289 aaKnown RBP10.52□□□□□ -0.73
CD44-206ENST00000415148 TAOK1Q7L7X3 1001 aa10.52□□□□□ -0.73
CD44-206ENST00000415148 KIAA0825Q8IV33 1275 aa10.52□□□□□ -0.73
CD44-206ENST00000415148 RPUSD2Q8IZ73 545 aaKnown RBP10.52□□□□□ -0.73
CD44-206ENST00000415148 SLCO2A1Q92959 643 aa10.52□□□□□ -0.73
CD44-206ENST00000415148 STAMBPL1Q96FJ0 436 aa10.52□□□□□ -0.73
CD44-206ENST00000415148 GJD4Q96KN9 370 aaPredicted RBP10.52□□□□□ -0.73
CD44-206ENST00000415148 ELAC2Q9BQ52 826 aaKnown RBP10.52□□□□□ -0.73
CD44-206ENST00000415148 RANBP17Q9H2T7 1088 aaKnown RBP10.52□□□□□ -0.73
CD44-206ENST00000415148 ST6GALNAC4Q9H4F1 302 aa10.52□□□□□ -0.73
CD44-206ENST00000415148 HERC5Q9UII4 1024 aaKnown RBP10.52□□□□□ -0.73
CD44-206ENST00000415148 DBR1Q9UK59 544 aaKnown RBP10.52□□□□□ -0.73
CD44-206ENST00000415148 L3MBTL1Q9Y468 752 aa10.52□□□□□ -0.73
CD44-206ENST00000415148 A0A1W2PRG0 241 aa10.52□□□□□ -0.73
CD44-206ENST00000415148 CYP1A2P05177 515 aa10.52□□□□□ -0.73
CD44-206ENST00000415148 COMTP21964 271 aa10.52□□□□□ -0.73
CD44-206ENST00000415148 COILP38432 576 aaPredicted RBP10.52□□□□□ -0.73
CD44-206ENST00000415148 PPP1R7Q15435 360 aa10.52□□□□□ -0.73
CD44-206ENST00000415148 TRMT10CQ7L0Y3 403 aaKnown RBP10.52□□□□□ -0.73
CD44-206ENST00000415148 FAM71AQ8IYT1 594 aa10.52□□□□□ -0.73
CD44-206ENST00000415148 NLGN1Q8N2Q7 840 aa10.52□□□□□ -0.73
CD44-206ENST00000415148 SLC17A8Q8NDX2 589 aa10.52□□□□□ -0.73
CD44-206ENST00000415148 SLC20A1Q8WUM9 679 aa10.52□□□□□ -0.73
CD44-206ENST00000415148 TCP11Q8WWU5 503 aa10.52□□□□□ -0.73
CD44-206ENST00000415148 MASTLQ96GX5 879 aa10.52□□□□□ -0.73
CD44-206ENST00000415148 IWS1Q96ST2 819 aa10.52□□□□□ -0.73
CD44-206ENST00000415148 POP1Q99575 1024 aaKnown RBP10.52□□□□□ -0.73
CD44-206ENST00000415148 TIPINQ9BVW5 301 aa10.52□□□□□ -0.73
CD44-206ENST00000415148 PLVAPQ9BX97 442 aa10.52□□□□□ -0.73
CD44-206ENST00000415148 NOD2Q9HC29 1040 aa10.52□□□□□ -0.73
CD44-206ENST00000415148 WRAP73Q9P2S5 460 aaPredicted RBP10.52□□□□□ -0.73
CD44-206ENST00000415148 UVRAGQ9P2Y5 699 aa10.52□□□□□ -0.73
CD44-206ENST00000415148 BAIAP2L1Q9UHR4 511 aa10.52□□□□□ -0.73
CD44-206ENST00000415148 TMX2Q9Y320 296 aa10.52□□□□□ -0.73
CD44-206ENST00000415148 A8MUI8 341 aa10.51□□□□□ -0.73
CD44-206ENST00000415148 RIPK2O43353 540 aa10.51□□□□□ -0.73
CD44-206ENST00000415148 CDC25CP30307 473 aa10.51□□□□□ -0.73
CD44-206ENST00000415148 KCNJ2P63252 427 aa10.51□□□□□ -0.73
CD44-206ENST00000415148 LRRC14Q15048 493 aa10.51□□□□□ -0.73
CD44-206ENST00000415148 PADI6Q6TGC4 694 aa10.51□□□□□ -0.73
CD44-206ENST00000415148 NIPA1Q7RTP0 329 aa10.51□□□□□ -0.73
CD44-206ENST00000415148 TBC1D1Q86TI0 1168 aaPredicted RBP10.51□□□□□ -0.73
CD44-206ENST00000415148 SLC13A5Q86YT5 568 aaPredicted RBP10.51□□□□□ -0.73
CD44-206ENST00000415148 ARHGEF19Q8IW93 802 aa10.51□□□□□ -0.73
CD44-206ENST00000415148 DAW1Q8N136 415 aa10.51□□□□□ -0.73
CD44-206ENST00000415148 XXYLT1Q8NBI6 393 aa10.51□□□□□ -0.73
CD44-206ENST00000415148 RDH13Q8NBN7 331 aa10.51□□□□□ -0.73
CD44-206ENST00000415148 LXNQ9BS40 222 aa10.51□□□□□ -0.73
CD44-206ENST00000415148 NSRP1Q9H0G5 558 aaKnown RBP10.51□□□□□ -0.73
CD44-206ENST00000415148 LRRC19Q9H756 370 aa10.51□□□□□ -0.73
CD44-206ENST00000415148 INTS9Q9NV88 658 aaKnown RBP10.51□□□□□ -0.73
CD44-206ENST00000415148 PASKQ96RG2 1323 aa10.51□□□□□ -0.73
CD44-206ENST00000415148 TMEM110-MUSTN1A8MSY1 372 aa10.51□□□□□ -0.73
CD44-206ENST00000415148 K7ENM7 598 aa10.51□□□□□ -0.73
CD44-206ENST00000415148 IPO5O00410 1097 aaKnown RBP10.51□□□□□ -0.73
CD44-206ENST00000415148 RASGRF2O14827 1237 aa10.51□□□□□ -0.73
CD44-206ENST00000415148 P4HBP07237 508 aaKnown RBP10.51□□□□□ -0.73
CD44-206ENST00000415148 ARP10275 920 aa10.51□□□□□ -0.73
CD44-206ENST00000415148 CHRNB2P17787 502 aa10.51□□□□□ -0.73
CD44-206ENST00000415148 PAX7P23759 505 aa10.51□□□□□ -0.73
CD44-206ENST00000415148 NF2P35240 595 aa10.51□□□□□ -0.73
CD44-206ENST00000415148 MFAP3P55082 362 aa10.51□□□□□ -0.73
CD44-206ENST00000415148 DLG4P78352 724 aa10.51□□□□□ -0.73
CD44-206ENST00000415148 JAG1P78504 1218 aa10.51□□□□□ -0.73
CD44-206ENST00000415148 PPP3CAQ08209 521 aa10.51□□□□□ -0.73
CD44-206ENST00000415148 MESDQ14696 234 aa10.51□□□□□ -0.73
CD44-206ENST00000415148 ZNF568Q3ZCX4 644 aa10.51□□□□□ -0.73
CD44-206ENST00000415148 SYDE1Q6ZW31 735 aaPredicted RBP10.51□□□□□ -0.73
CD44-206ENST00000415148 FAM160B2Q86V87 743 aa10.51□□□□□ -0.73
CD44-206ENST00000415148 EPS8L1Q8TE68 723 aa10.51□□□□□ -0.73
CD44-206ENST00000415148 PRCCQ92733 491 aaPredicted RBP10.51□□□□□ -0.73
CD44-206ENST00000415148 MIEF2Q96C03 454 aa10.51□□□□□ -0.73
CD44-206ENST00000415148 MXRA8Q9BRK3 442 aa10.51□□□□□ -0.73
CD44-206ENST00000415148 DBNDD1Q9H9R9 158 aa10.51□□□□□ -0.73
CD44-206ENST00000415148 MLXIPLQ9NP71 852 aa10.51□□□□□ -0.73
CD44-206ENST00000415148 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.51□□□□□ -0.735e-38■■■■■ 698.7
CD44-206ENST00000415148 WHRNQ9P202 907 aa10.51□□□□□ -0.73
CD44-206ENST00000415148 NOCTQ9UK39 431 aaKnown RBP10.51□□□□□ -0.73
CD44-206ENST00000415148 SLC12A4Q9UP95 1085 aa10.51□□□□□ -0.73
CD44-206ENST00000415148 PCDHAC2Q9Y5I4 1007 aa10.51□□□□□ -0.73
CD44-206ENST00000415148 CD2APQ9Y5K6 639 aa10.51□□□□□ -0.73
CD44-206ENST00000415148 ZNF646O15015 1829 aaPredicted RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms