RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 ZDHHC9Q9Y397 364 aa16.14■□□□□ 0.17
CHD1-202ENST00000414220 MYO9BQ13459 2157 aa16.14■□□□□ 0.17
CHD1-202ENST00000414220 ARL5CA6NH57 179 aa16.13■□□□□ 0.17
CHD1-202ENST00000414220 GRM6O15303 877 aa16.13■□□□□ 0.17
CHD1-202ENST00000414220 TOM1L1O75674 476 aa16.13■□□□□ 0.17
CHD1-202ENST00000414220 ITGB1P05556 798 aa16.13■□□□□ 0.17
CHD1-202ENST00000414220 MCF2P10911 925 aa16.13■□□□□ 0.17
CHD1-202ENST00000414220 AKAP5P24588 427 aa16.13■□□□□ 0.17
CHD1-202ENST00000414220 MLH1P40692 756 aa16.13■□□□□ 0.17
CHD1-202ENST00000414220 BCAR1P56945 870 aa16.13■□□□□ 0.17
CHD1-202ENST00000414220 AAK1Q2M2I8 961 aa16.13■□□□□ 0.17
CHD1-202ENST00000414220 ZNF568Q3ZCX4 644 aa16.13■□□□□ 0.17
CHD1-202ENST00000414220 RESP18Q5W5W9 173 aa16.13■□□□□ 0.17
CHD1-202ENST00000414220 SHC4Q6S5L8 630 aa16.13■□□□□ 0.17
CHD1-202ENST00000414220 MPZL3Q6UWV2 235 aa16.13■□□□□ 0.17
CHD1-202ENST00000414220 STXBP4Q6ZWJ1 553 aa16.13■□□□□ 0.17
CHD1-202ENST00000414220 LEO1Q8WVC0 666 aaPredicted RBP16.13■□□□□ 0.17
CHD1-202ENST00000414220 MRPS27Q92552 414 aaKnown RBP16.13■□□□□ 0.17
CHD1-202ENST00000414220 KCNN1Q92952 543 aa16.13■□□□□ 0.17
CHD1-202ENST00000414220 CCDC34Q96HJ3 373 aa16.13■□□□□ 0.17
CHD1-202ENST00000414220 TARS2Q9BW92 718 aaKnown RBP16.13■□□□□ 0.17
CHD1-202ENST00000414220 NRDE2Q9H7Z3 1164 aa16.13■□□□□ 0.17
CHD1-202ENST00000414220 TLR9Q9NR96 1032 aa16.13■□□□□ 0.17
CHD1-202ENST00000414220 SNTG2Q9NY99 539 aa16.13■□□□□ 0.17
CHD1-202ENST00000414220 COG5Q9UP83 839 aa16.13■□□□□ 0.17
CHD1-202ENST00000414220 FAN1Q9Y2M0 1017 aa16.13■□□□□ 0.17
CHD1-202ENST00000414220 HES2Q9Y543 173 aa16.13■□□□□ 0.17
CHD1-202ENST00000414220 FSD2A1L4K1 749 aa16.12■□□□□ 0.17
CHD1-202ENST00000414220 GOLGA6L4A6NEF3 574 aa16.12■□□□□ 0.17
CHD1-202ENST00000414220 MEIS3P2A8K0S8 358 aa16.12■□□□□ 0.17
CHD1-202ENST00000414220 INPPL1O15357 1258 aa16.12■□□□□ 0.17
CHD1-202ENST00000414220 POLR2DO15514 142 aaKnown RBP16.12■□□□□ 0.17
CHD1-202ENST00000414220 CLDN3O15551 220 aa16.12■□□□□ 0.17
CHD1-202ENST00000414220 CMA1P23946 247 aa16.12■□□□□ 0.17
CHD1-202ENST00000414220 LIG4P49917 911 aa16.12■□□□□ 0.17
CHD1-202ENST00000414220 GRIK3Q13003 919 aa16.12■□□□□ 0.17
CHD1-202ENST00000414220 ALCAMQ13740 583 aa16.12■□□□□ 0.17
CHD1-202ENST00000414220 KYAT1Q16773 422 aa16.12■□□□□ 0.17
CHD1-202ENST00000414220 HERC4Q5GLZ8 1057 aaPredicted RBP16.12■□□□□ 0.17
CHD1-202ENST00000414220 TMEM87AQ8NBN3 555 aa16.12■□□□□ 0.17
CHD1-202ENST00000414220 LRRC15Q8TF66 581 aa16.12■□□□□ 0.17
CHD1-202ENST00000414220 HVCN1Q96D96 273 aa16.12■□□□□ 0.17
CHD1-202ENST00000414220 RNF39Q9H2S5 420 aa16.12■□□□□ 0.17
CHD1-202ENST00000414220 MRPL44Q9H9J2 332 aaKnown RBP16.12■□□□□ 0.17
CHD1-202ENST00000414220 NGRNQ9NPE2 291 aaKnown RBP16.12■□□□□ 0.17
CHD1-202ENST00000414220 PANK4Q9NVE7 773 aa16.12■□□□□ 0.17
CHD1-202ENST00000414220 KCNH3Q9ULD8 1083 aa16.12■□□□□ 0.17
CHD1-202ENST00000414220 TBX20Q9UMR3 447 aa16.12■□□□□ 0.17
CHD1-202ENST00000414220 EXOC7Q9UPT5 735 aa16.12■□□□□ 0.17
CHD1-202ENST00000414220 PCDHB13Q9Y5F0 798 aa16.12■□□□□ 0.17
CHD1-202ENST00000414220 RALGAPA2Q2PPJ7 1873 aa16.12■□□□□ 0.17
CHD1-202ENST00000414220 MYMKA6NI61 221 aa16.11■□□□□ 0.17
CHD1-202ENST00000414220 HNRNPDLO14979 420 aaKnown RBP16.11■□□□□ 0.17
CHD1-202ENST00000414220 GALTP07902 379 aa16.11■□□□□ 0.17
CHD1-202ENST00000414220 SCNN1GP51170 649 aa16.11■□□□□ 0.17
CHD1-202ENST00000414220 GTF2BQ00403 316 aa16.11■□□□□ 0.17
CHD1-202ENST00000414220 EEF1DP3Q658K8 133 aa16.11■□□□□ 0.17
CHD1-202ENST00000414220 TMC7Q7Z402 723 aa16.11■□□□□ 0.17
CHD1-202ENST00000414220 ZBTB33Q86T24 672 aa16.11■□□□□ 0.17
CHD1-202ENST00000414220 SLC39A11Q8N1S5 342 aa16.11■□□□□ 0.17
CHD1-202ENST00000414220 HLA-CQ95604 372 aa16.11■□□□□ 0.17
CHD1-202ENST00000414220 ACAP3Q96P50 834 aa16.11■□□□□ 0.17
CHD1-202ENST00000414220 COLEC11Q9BWP8 271 aa16.11■□□□□ 0.17
CHD1-202ENST00000414220 ST6GALNAC4Q9H4F1 302 aa16.11■□□□□ 0.17
CHD1-202ENST00000414220 ENTPD7Q9NQZ7 604 aa16.11■□□□□ 0.17
CHD1-202ENST00000414220 ANKFY1Q9P2R3 1169 aa16.11■□□□□ 0.17
CHD1-202ENST00000414220 THEGQ9P2T0 379 aa16.11■□□□□ 0.17
CHD1-202ENST00000414220 USP25Q9UHP3 1055 aa16.11■□□□□ 0.17
CHD1-202ENST00000414220 GDAQ9Y2T3 454 aa16.11■□□□□ 0.17
CHD1-202ENST00000414220 A0A087X0B3 334 aa16.1■□□□□ 0.17
CHD1-202ENST00000414220 TTLL13PA6NNM8 815 aa16.1■□□□□ 0.17
CHD1-202ENST00000414220 RECQL4O94761 1208 aa16.1■□□□□ 0.17
CHD1-202ENST00000414220 THP07101 528 aa16.1■□□□□ 0.17
CHD1-202ENST00000414220 HARSP12081 509 aaKnown RBP16.1■□□□□ 0.17
CHD1-202ENST00000414220 GRM5P41594 1212 aa16.1■□□□□ 0.17
CHD1-202ENST00000414220 OR1G1P47890 313 aa16.1■□□□□ 0.17
CHD1-202ENST00000414220 NOLC1Q14978 699 aaKnown RBP eCLIP16.1■□□□□ 0.17
CHD1-202ENST00000414220 SLFN12LQ6IEE8 588 aa16.1■□□□□ 0.17
CHD1-202ENST00000414220 TAS1R3Q7RTX0 852 aa16.1■□□□□ 0.17
CHD1-202ENST00000414220 SFR1Q86XK3 245 aa16.1■□□□□ 0.17
CHD1-202ENST00000414220 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.1■□□□□ 0.17
CHD1-202ENST00000414220 ZFP42Q96MM3 310 aa16.1■□□□□ 0.17
CHD1-202ENST00000414220 CDT1Q9H211 546 aa16.1■□□□□ 0.17
CHD1-202ENST00000414220 PTPRHQ9HD43 1115 aa16.1■□□□□ 0.17
CHD1-202ENST00000414220 KBTBD4Q9NVX7 518 aa16.1■□□□□ 0.17
CHD1-202ENST00000414220 KLK14Q9P0G3 267 aa16.1■□□□□ 0.17
CHD1-202ENST00000414220 HCSTQ9UBK5 93 aa16.1■□□□□ 0.17
CHD1-202ENST00000414220 CIZ1Q9ULV3 898 aaPredicted RBP16.1■□□□□ 0.17
CHD1-202ENST00000414220 USP20Q9Y2K6 914 aa16.1■□□□□ 0.17
CHD1-202ENST00000414220 FNDC1Q4ZHG4 1894 aaPredicted RBP16.1■□□□□ 0.17
CHD1-202ENST00000414220 NT5C1B-RDH14C9J2C7 533 aa16.09■□□□□ 0.17
CHD1-202ENST00000414220 CSPG5O95196 566 aa16.09■□□□□ 0.17
CHD1-202ENST00000414220 GCNT3O95395 438 aa16.09■□□□□ 0.17
CHD1-202ENST00000414220 PROZP22891 400 aa16.09■□□□□ 0.17
CHD1-202ENST00000414220 NMT1P30419 496 aaKnown RBP16.09■□□□□ 0.17
CHD1-202ENST00000414220 CA8P35219 290 aa16.09■□□□□ 0.17
CHD1-202ENST00000414220 ASIC1P78348 528 aa16.09■□□□□ 0.17
CHD1-202ENST00000414220 SMC1AQ14683 1233 aaKnown RBP16.09■□□□□ 0.17
CHD1-202ENST00000414220 E2F4Q16254 413 aa16.09■□□□□ 0.17
CHD1-202ENST00000414220 TCEAL5Q5H9L2 206 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms