RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 OSBPL10Q9BXB5 764 aa4□□□□□ -1.77
SF3B1-203ENST00000414174 TEX13BQ9BXU2 312 aa4□□□□□ -1.77
SF3B1-203ENST00000414174 ZWILCHQ9H900 591 aa4□□□□□ -1.77
SF3B1-203ENST00000414174 SEMA3GQ9NS98 782 aa4□□□□□ -1.77
SF3B1-203ENST00000414174 TRMT13Q9NUP7 481 aaKnown RBP4□□□□□ -1.77
SF3B1-203ENST00000414174 NSMCE4AQ9NXX6 385 aa4□□□□□ -1.77
SF3B1-203ENST00000414174 RTEL1Q9NZ71 1219 aa4□□□□□ -1.77
SF3B1-203ENST00000414174 ITGB1BP2Q9UKP3 347 aa4□□□□□ -1.77
SF3B1-203ENST00000414174 AGO2Q9UKV8 859 aaKnown RBP4□□□□□ -1.77
SF3B1-203ENST00000414174 HPCAL4Q9UM19 191 aa4□□□□□ -1.77
SF3B1-203ENST00000414174 FAM50BQ9Y247 325 aa4□□□□□ -1.77
SF3B1-203ENST00000414174 CAB39Q9Y376 341 aaPredicted RBP4□□□□□ -1.77
SF3B1-203ENST00000414174 JRKLQ9Y4A0 524 aa4□□□□□ -1.77
SF3B1-203ENST00000414174 SPEF1Q9Y4P9 236 aa4□□□□□ -1.77
SF3B1-203ENST00000414174 PTCH2Q9Y6C5 1203 aa4□□□□□ -1.77
SF3B1-203ENST00000414174 SLC4A7Q9Y6M7 1214 aa4□□□□□ -1.77
SF3B1-203ENST00000414174 PHLDB1Q86UU1 1377 aa4□□□□□ -1.77
SF3B1-203ENST00000414174 SOS1Q07889 1333 aaPredicted RBP3.99□□□□□ -1.77
SF3B1-203ENST00000414174 GPR75-ASB3A0A0A6YYF3 556 aa3.99□□□□□ -1.77
SF3B1-203ENST00000414174 F8W031 263 aaPredicted RBP3.99□□□□□ -1.77
SF3B1-203ENST00000414174 H7C0S8 307 aa3.99□□□□□ -1.77
SF3B1-203ENST00000414174 AP3B1O00203 1094 aa3.99□□□□□ -1.77
SF3B1-203ENST00000414174 CACNB4O00305 520 aaPredicted RBP3.99□□□□□ -1.77
SF3B1-203ENST00000414174 FYB1O15117 783 aa3.99□□□□□ -1.77
SF3B1-203ENST00000414174 PLSCR1O15162 318 aa3.99□□□□□ -1.77
SF3B1-203ENST00000414174 XPOTO43592 962 aaKnown RBP3.99□□□□□ -1.77
SF3B1-203ENST00000414174 TSPAN3O60637 253 aa3.99□□□□□ -1.77
SF3B1-203ENST00000414174 MAFKO60675 156 aa3.99□□□□□ -1.77
SF3B1-203ENST00000414174 CTNND1O60716 968 aaKnown RBP3.99□□□□□ -1.77
SF3B1-203ENST00000414174 SOCS5O75159 536 aa3.99□□□□□ -1.77
SF3B1-203ENST00000414174 TMEM127O75204 238 aa3.99□□□□□ -1.77
SF3B1-203ENST00000414174 DDHD2O94830 711 aa3.99□□□□□ -1.77
SF3B1-203ENST00000414174 CST3P01034 146 aaPredicted RBP3.99□□□□□ -1.77
SF3B1-203ENST00000414174 ITGB1P05556 798 aa3.99□□□□□ -1.77
SF3B1-203ENST00000414174 ELF1P32519 619 aa3.99□□□□□ -1.77
SF3B1-203ENST00000414174 CA8P35219 290 aa3.99□□□□□ -1.77
SF3B1-203ENST00000414174 TCF7P36402 384 aaPredicted RBP3.99□□□□□ -1.77
SF3B1-203ENST00000414174 MAP2K2P36507 400 aa3.99□□□□□ -1.77
SF3B1-203ENST00000414174 ALDH5A1P51649 535 aaPredicted RBP3.99□□□□□ -1.77
SF3B1-203ENST00000414174 CLCN2P51788 898 aa3.99□□□□□ -1.77
SF3B1-203ENST00000414174 CLCN7P51798 805 aa3.99□□□□□ -1.77
SF3B1-203ENST00000414174 SLC12A2P55011 1212 aa3.99□□□□□ -1.77
SF3B1-203ENST00000414174 UBXN1Q04323 297 aa3.99□□□□□ -1.77
SF3B1-203ENST00000414174 GBE1Q04446 702 aa3.99□□□□□ -1.77
SF3B1-203ENST00000414174 ZBTB16Q05516 673 aa3.99□□□□□ -1.77
SF3B1-203ENST00000414174 DPYSQ14117 519 aa3.99□□□□□ -1.77
SF3B1-203ENST00000414174 GRM3Q14832 879 aa3.99□□□□□ -1.77
SF3B1-203ENST00000414174 RBBP5Q15291 538 aaKnown RBP3.99□□□□□ -1.77
SF3B1-203ENST00000414174 IMMTQ16891 758 aaKnown RBP3.99□□□□□ -1.77
SF3B1-203ENST00000414174 GEN1Q17RS7 908 aa3.99□□□□□ -1.77
SF3B1-203ENST00000414174 SLC45A4Q5BKX6 768 aa3.99□□□□□ -1.77
SF3B1-203ENST00000414174 GPR158Q5T848 1215 aa3.99□□□□□ -1.77
SF3B1-203ENST00000414174 METTL11BQ5VVY1 283 aa3.99□□□□□ -1.77
SF3B1-203ENST00000414174 PRAMEF13Q5VWM6 474 aa3.99□□□□□ -1.77
SF3B1-203ENST00000414174 TPGS2Q68CL5 300 aa3.99□□□□□ -1.77
SF3B1-203ENST00000414174 OTUD7BQ6GQQ9 843 aa3.99□□□□□ -1.77
SF3B1-203ENST00000414174 CAPRIN2Q6IMN6 1127 aaKnown RBP3.99□□□□□ -1.77
SF3B1-203ENST00000414174 POMZP3Q6PJE2 187 aa3.99□□□□□ -1.77
SF3B1-203ENST00000414174 CCDC81Q6ZN84 652 aa3.99□□□□□ -1.77
SF3B1-203ENST00000414174 C22orf34Q6ZV56 151 aa3.99□□□□□ -1.77
SF3B1-203ENST00000414174 PLEKHM3Q6ZWE6 761 aa3.99□□□□□ -1.77
SF3B1-203ENST00000414174 IKBIPQ70UQ0 350 aa3.99□□□□□ -1.77
SF3B1-203ENST00000414174 ENOSF1Q7L5Y1 443 aa3.99□□□□□ -1.77
SF3B1-203ENST00000414174 ERMP1Q7Z2K6 904 aa3.99□□□□□ -1.77
SF3B1-203ENST00000414174 HDXQ7Z353 690 aa3.99□□□□□ -1.77
SF3B1-203ENST00000414174 PPFIBP1Q86W92 1011 aa3.99□□□□□ -1.77
SF3B1-203ENST00000414174 SLC41A1Q8IVJ1 513 aa3.99□□□□□ -1.77
SF3B1-203ENST00000414174 FAM114A1Q8IWE2 563 aa3.99□□□□□ -1.77
SF3B1-203ENST00000414174 TRMT2AQ8IZ69 625 aaKnown RBP3.99□□□□□ -1.77
SF3B1-203ENST00000414174 CAMKK1Q8N5S9 505 aa3.99□□□□□ -1.77
SF3B1-203ENST00000414174 UBR7Q8N806 425 aa3.99□□□□□ -1.77
SF3B1-203ENST00000414174 MARCH10Q8NA82 808 aaPredicted RBP3.99□□□□□ -1.77
SF3B1-203ENST00000414174 IL17RDQ8NFM7 739 aa3.99□□□□□ -1.77
SF3B1-203ENST00000414174 NSUN6Q8TEA1 469 aaKnown RBP3.99□□□□□ -1.77
SF3B1-203ENST00000414174 UTP15Q8TED0 518 aaKnown RBP3.99□□□□□ -1.77
SF3B1-203ENST00000414174 CENPIQ92674 756 aaPredicted RBP3.99□□□□□ -1.77
SF3B1-203ENST00000414174 CDKL2Q92772 493 aa3.99□□□□□ -1.77
SF3B1-203ENST00000414174 MTMR8Q96EF0 704 aa3.99□□□□□ -1.77
SF3B1-203ENST00000414174 RBM17Q96I25 401 aaKnown RBP3.99□□□□□ -1.77
SF3B1-203ENST00000414174 JAKMIP1Q96N16 626 aaKnown RBP3.99□□□□□ -1.77
SF3B1-203ENST00000414174 SEC62Q99442 399 aaKnown RBP3.99□□□□□ -1.77
SF3B1-203ENST00000414174 MIPEPQ99797 713 aa3.99□□□□□ -1.77
SF3B1-203ENST00000414174 DPH2Q9BQC3 489 aaPredicted RBP3.99□□□□□ -1.77
SF3B1-203ENST00000414174 CHCHD6Q9BRQ6 235 aa3.99□□□□□ -1.77
SF3B1-203ENST00000414174 GPATCH1Q9BRR8 931 aaKnown RBP3.99□□□□□ -1.77
SF3B1-203ENST00000414174 UQCC2Q9BRT2 126 aa3.99□□□□□ -1.77
SF3B1-203ENST00000414174 ZPBPQ9BS86 351 aa3.99□□□□□ -1.77
SF3B1-203ENST00000414174 SLC26A6Q9BXS9 759 aa3.99□□□□□ -1.77
SF3B1-203ENST00000414174 FOXQ1Q9C009 403 aa3.99□□□□□ -1.77
SF3B1-203ENST00000414174 SYNCQ9H7C4 482 aa3.99□□□□□ -1.77
SF3B1-203ENST00000414174 KCNK12Q9HB15 430 aa3.99□□□□□ -1.77
SF3B1-203ENST00000414174 TMEM165Q9HC07 324 aa3.99□□□□□ -1.77
SF3B1-203ENST00000414174 ATP13A1Q9HD20 1204 aa3.99□□□□□ -1.77
SF3B1-203ENST00000414174 GPR108Q9NPR9 543 aa3.99□□□□□ -1.77
SF3B1-203ENST00000414174 PRDM5Q9NQX1 630 aaPredicted RBP3.99□□□□□ -1.77
SF3B1-203ENST00000414174 PICK1Q9NRD5 415 aa3.99□□□□□ -1.77
SF3B1-203ENST00000414174 SEPT11Q9NVA2 429 aaKnown RBP3.99□□□□□ -1.77
SF3B1-203ENST00000414174 SIRT5Q9NXA8 310 aa3.99□□□□□ -1.77
SF3B1-203ENST00000414174 TUBA8Q9NY65 449 aaPredicted RBP3.99□□□□□ -1.77
SF3B1-203ENST00000414174 TJP2Q9UDY2 1190 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms