RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 RPGRIP1Q96KN7 1286 aa10.14□□□□□ -0.79
SNHG3-201ENST00000413987 TSGA13Q96PP4 275 aa10.14□□□□□ -0.79
SNHG3-201ENST00000413987 UIMC1Q96RL1 719 aa10.14□□□□□ -0.79
SNHG3-201ENST00000413987 DESI2Q9BSY9 194 aa10.14□□□□□ -0.79
SNHG3-201ENST00000413987 CRB3Q9BUF7 120 aa10.14□□□□□ -0.79
SNHG3-201ENST00000413987 SAP130Q9H0E3 1048 aa10.14□□□□□ -0.79
SNHG3-201ENST00000413987 DEFB129Q9H1M3 183 aa10.14□□□□□ -0.79
SNHG3-201ENST00000413987 KAT14Q9H8E8 782 aa10.14□□□□□ -0.79
SNHG3-201ENST00000413987 SUGCTQ9HAC7 445 aa10.14□□□□□ -0.79
SNHG3-201ENST00000413987 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.14□□□□□ -0.79
SNHG3-201ENST00000413987 LZTFL1Q9NQ48 299 aa10.14□□□□□ -0.79
SNHG3-201ENST00000413987 STIM2Q9P246 746 aa10.14□□□□□ -0.79
SNHG3-201ENST00000413987 TARSL2A2RTX5 802 aaKnown RBP10.14□□□□□ -0.79
SNHG3-201ENST00000413987 ANKRD65E5RJM6 399 aa10.14□□□□□ -0.79
SNHG3-201ENST00000413987 AREL1O15033 823 aa10.14□□□□□ -0.79
SNHG3-201ENST00000413987 NCAM2O15394 837 aa10.14□□□□□ -0.79
SNHG3-201ENST00000413987 MICAL2O94851 1124 aa10.14□□□□□ -0.79
SNHG3-201ENST00000413987 GH2P01242 217 aa10.14□□□□□ -0.79
SNHG3-201ENST00000413987 VEGFAP15692 232 aaPredicted RBP10.14□□□□□ -0.79
SNHG3-201ENST00000413987 ZNF18P17022 549 aa10.14□□□□□ -0.79
SNHG3-201ENST00000413987 CCNCP24863 283 aa10.14□□□□□ -0.79
SNHG3-201ENST00000413987 ALDH5A1P51649 535 aaPredicted RBP10.14□□□□□ -0.79
SNHG3-201ENST00000413987 PPFIA1Q13136 1202 aa10.14□□□□□ -0.79
SNHG3-201ENST00000413987 NBPF12Q5TAG4 269 aaPredicted RBP10.14□□□□□ -0.79
SNHG3-201ENST00000413987 TRIM68Q6AZZ1 485 aa10.14□□□□□ -0.79
SNHG3-201ENST00000413987 GALNT13Q8IUC8 556 aa10.14□□□□□ -0.79
SNHG3-201ENST00000413987 TRIML1Q8N9V2 468 aa10.14□□□□□ -0.79
SNHG3-201ENST00000413987 TEPSINQ96N21 525 aa10.14□□□□□ -0.79
SNHG3-201ENST00000413987 SLC26A6Q9BXS9 759 aa10.14□□□□□ -0.79
SNHG3-201ENST00000413987 OSBPL7Q9BZF2 842 aa10.14□□□□□ -0.79
SNHG3-201ENST00000413987 EHD4Q9H223 541 aa10.14□□□□□ -0.79
SNHG3-201ENST00000413987 ZNF232Q9UNY5 417 aa10.14□□□□□ -0.79
SNHG3-201ENST00000413987 STIM1Q13586 685 aa10.13□□□□□ -0.79
SNHG3-201ENST00000413987 COL9A2Q14055 689 aaPredicted RBP10.13□□□□□ -0.79
SNHG3-201ENST00000413987 NR1I3Q14994 352 aa10.13□□□□□ -0.79
SNHG3-201ENST00000413987 RNF219Q5W0B1 726 aaPredicted RBP10.13□□□□□ -0.79
SNHG3-201ENST00000413987 CCDC81Q6ZN84 652 aa10.13□□□□□ -0.79
SNHG3-201ENST00000413987 B4GALNT4Q76KP1 1039 aa10.13□□□□□ -0.79
SNHG3-201ENST00000413987 EPM2AIP1Q7L775 607 aaPredicted RBP10.13□□□□□ -0.79
SNHG3-201ENST00000413987 NRSN1Q8IZ57 195 aa10.13□□□□□ -0.79
SNHG3-201ENST00000413987 IGSF22Q8N9C0 903 aa10.13□□□□□ -0.79
SNHG3-201ENST00000413987 CLIP3Q96DZ5 547 aa10.13□□□□□ -0.79
SNHG3-201ENST00000413987 CRACR2AQ9BSW2 395 aa10.13□□□□□ -0.79
SNHG3-201ENST00000413987 ZNF287Q9HBT7 754 aa10.13□□□□□ -0.79
SNHG3-201ENST00000413987 TRMT13Q9NUP7 481 aaKnown RBP10.13□□□□□ -0.79
SNHG3-201ENST00000413987 MTMR4Q9NYA4 1195 aa10.13□□□□□ -0.79
SNHG3-201ENST00000413987 HPCAL4Q9UM19 191 aa10.13□□□□□ -0.79
SNHG3-201ENST00000413987 CLEC11AQ9Y240 323 aa10.13□□□□□ -0.79
SNHG3-201ENST00000413987 E2F6O75461 281 aa10.13□□□□□ -0.79
SNHG3-201ENST00000413987 POTEIP0CG38 1075 aa10.13□□□□□ -0.79
SNHG3-201ENST00000413987 POTEJP0CG39 1038 aa10.13□□□□□ -0.79
SNHG3-201ENST00000413987 CD86P42081 329 aa10.13□□□□□ -0.79
SNHG3-201ENST00000413987 LIG3P49916 1009 aa10.13□□□□□ -0.79
SNHG3-201ENST00000413987 LRRC74AQ0VAA2 488 aa10.13□□□□□ -0.79
SNHG3-201ENST00000413987 SLC35G1Q2M3R5 365 aa10.13□□□□□ -0.79
SNHG3-201ENST00000413987 TATDN1Q6P1N9 297 aa10.13□□□□□ -0.79
SNHG3-201ENST00000413987 SLC35F6Q8N357 371 aa10.13□□□□□ -0.79
SNHG3-201ENST00000413987 SRBD1Q8N5C6 995 aaKnown RBP10.13□□□□□ -0.79
SNHG3-201ENST00000413987 GIMAP7Q8NHV1 300 aa10.13□□□□□ -0.79
SNHG3-201ENST00000413987 COG1Q8WTW3 980 aa10.13□□□□□ -0.79
SNHG3-201ENST00000413987 ANKRD49Q8WVL7 239 aa10.13□□□□□ -0.79
SNHG3-201ENST00000413987 DPF3Q92784 378 aa10.13□□□□□ -0.79
SNHG3-201ENST00000413987 CABS1Q96KC9 395 aa10.13□□□□□ -0.79
SNHG3-201ENST00000413987 OSGEPQ9NPF4 335 aa10.13□□□□□ -0.79
SNHG3-201ENST00000413987 SCHIP1Q9P0W5 487 aaPredicted RBP10.13□□□□□ -0.79
SNHG3-201ENST00000413987 MYO6Q9UM54 1294 aa10.13□□□□□ -0.79
SNHG3-201ENST00000413987 POLR2AP24928 1970 aaKnown RBP10.13□□□□□ -0.79
SNHG3-201ENST00000413987 IGKV6D-41A0A0C4DH26 115 aa10.12□□□□□ -0.79
SNHG3-201ENST00000413987 A0A1B0GTH6 734 aa10.12□□□□□ -0.79
SNHG3-201ENST00000413987 ADM5C9JUS6 153 aa10.12□□□□□ -0.79
SNHG3-201ENST00000413987 GPR39O43194 453 aa10.12□□□□□ -0.79
SNHG3-201ENST00000413987 KRT13P13646 458 aa10.12□□□□□ -0.79
SNHG3-201ENST00000413987 GRK6P43250 576 aa10.12□□□□□ -0.79
SNHG3-201ENST00000413987 SEPHS1P49903 392 aa10.12□□□□□ -0.79
SNHG3-201ENST00000413987 IRAK1P51617 712 aa10.12□□□□□ -0.79
SNHG3-201ENST00000413987 USP14P54578 494 aa10.12□□□□□ -0.79
SNHG3-201ENST00000413987 PNOCQ13519 176 aa10.12□□□□□ -0.79
SNHG3-201ENST00000413987 DGKZQ13574 1117 aa10.12□□□□□ -0.79
SNHG3-201ENST00000413987 PPP2R5DQ14738 602 aa10.12□□□□□ -0.79
SNHG3-201ENST00000413987 PDCD2Q16342 344 aaPredicted RBP10.12□□□□□ -0.79
SNHG3-201ENST00000413987 RESP18Q5W5W9 173 aa10.12□□□□□ -0.79
SNHG3-201ENST00000413987 SIAH1Q8IUQ4 282 aa10.12□□□□□ -0.79
SNHG3-201ENST00000413987 CNGA4Q8IV77 575 aa10.12□□□□□ -0.79
SNHG3-201ENST00000413987 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.12□□□□□ -0.792e-18■■■■□ 23.2
SNHG3-201ENST00000413987 NAT8LQ8N9F0 302 aa10.12□□□□□ -0.79
SNHG3-201ENST00000413987 FNIP1Q8TF40 1166 aa10.12□□□□□ -0.79
SNHG3-201ENST00000413987 USP6NLQ92738 828 aa10.12□□□□□ -0.79
SNHG3-201ENST00000413987 KAT2BQ92831 832 aa10.12□□□□□ -0.79
SNHG3-201ENST00000413987 SHISA4Q96DD7 197 aa10.12□□□□□ -0.79
SNHG3-201ENST00000413987 GLIS2Q9BZE0 524 aaPredicted RBP10.12□□□□□ -0.79
SNHG3-201ENST00000413987 IRX2Q9BZI1 471 aaPredicted RBP10.12□□□□□ -0.79
SNHG3-201ENST00000413987 ANLNQ9NQW6 1124 aa10.12□□□□□ -0.79
SNHG3-201ENST00000413987 ACTR10Q9NZ32 417 aa10.12□□□□□ -0.79
SNHG3-201ENST00000413987 ZMYM5Q9UJ78 669 aa10.12□□□□□ -0.79
SNHG3-201ENST00000413987 GJD2Q9UKL4 321 aa10.12□□□□□ -0.79
SNHG3-201ENST00000413987 FAM184BQ9ULE4 1060 aa10.12□□□□□ -0.79
SNHG3-201ENST00000413987 NFE2L3Q9Y4A8 694 aa10.12□□□□□ -0.79
SNHG3-201ENST00000413987 SPEF1Q9Y4P9 236 aa10.12□□□□□ -0.79
SNHG3-201ENST00000413987 PCDHA5Q9Y5H7 936 aa10.12□□□□□ -0.79
SNHG3-201ENST00000413987 CENPFP49454 3210 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 909.3 ms