RNA–Protein interactions for RNA: ENST00000413731.1

UPF3AP1-201, Transcript of UPF3A pseudogene 1, humanhuman

BASIC

Gene UPF3AP1, Length 1,126 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP1-201ENST00000413731 VPS52Q8N1B4 723 aa9.26□□□□□ -0.93
UPF3AP1-201ENST00000413731 FLCNQ8NFG4 579 aa9.26□□□□□ -0.93
UPF3AP1-201ENST00000413731 NKD2Q969F2 451 aaPredicted RBP9.26□□□□□ -0.93
UPF3AP1-201ENST00000413731 TMEM169Q96HH4 297 aa9.26□□□□□ -0.93
UPF3AP1-201ENST00000413731 FAM167AQ96KS9 214 aa9.26□□□□□ -0.93
UPF3AP1-201ENST00000413731 PRIMPOLQ96LW4 560 aa9.26□□□□□ -0.93
UPF3AP1-201ENST00000413731 ZSCAN31Q96LW9 406 aaPredicted RBP9.26□□□□□ -0.93
UPF3AP1-201ENST00000413731 VN1R3Q9BXE9 311 aa9.26□□□□□ -0.93
UPF3AP1-201ENST00000413731 MRPL9Q9BYD2 267 aaKnown RBP9.26□□□□□ -0.93
UPF3AP1-201ENST00000413731 BACH2Q9BYV9 841 aa9.26□□□□□ -0.93
UPF3AP1-201ENST00000413731 KIAA1522Q9P206 1035 aaPredicted RBP9.26□□□□□ -0.93
UPF3AP1-201ENST00000413731 TCEAL9Q9UHQ7 104 aa9.26□□□□□ -0.93
UPF3AP1-201ENST00000413731 CEP131Q9UPN4 1083 aa9.26□□□□□ -0.93
UPF3AP1-201ENST00000413731 OTOGLQ3ZCN5 2332 aa9.26□□□□□ -0.93
UPF3AP1-201ENST00000413731 CACNA1IQ9P0X4 2223 aa9.25□□□□□ -0.93
UPF3AP1-201ENST00000413731 A0A0U1RQF3 1178 aa9.25□□□□□ -0.93
UPF3AP1-201ENST00000413731 MEIS3P2A8K0S8 358 aa9.25□□□□□ -0.93
UPF3AP1-201ENST00000413731 MAGEB2O15479 319 aa9.25□□□□□ -0.93
UPF3AP1-201ENST00000413731 PI15O43692 258 aa9.25□□□□□ -0.93
UPF3AP1-201ENST00000413731 B4GALT3O60512 393 aa9.25□□□□□ -0.93
UPF3AP1-201ENST00000413731 CTDNEP1O95476 244 aa9.25□□□□□ -0.93
UPF3AP1-201ENST00000413731 CXCL14O95715 111 aa9.25□□□□□ -0.93
UPF3AP1-201ENST00000413731 CYP3A4P08684 503 aa9.25□□□□□ -0.93
UPF3AP1-201ENST00000413731 CTSAP10619 480 aa9.25□□□□□ -0.93
UPF3AP1-201ENST00000413731 NPR3P17342 541 aa9.25□□□□□ -0.93
UPF3AP1-201ENST00000413731 SEC13P55735 322 aa9.25□□□□□ -0.93
UPF3AP1-201ENST00000413731 ST3GAL1Q11201 340 aa9.25□□□□□ -0.93
UPF3AP1-201ENST00000413731 DRP2Q13474 957 aa9.25□□□□□ -0.93
UPF3AP1-201ENST00000413731 TRIM29Q14134 588 aa9.25□□□□□ -0.93
UPF3AP1-201ENST00000413731 PTPN14Q15678 1187 aa9.25□□□□□ -0.93
UPF3AP1-201ENST00000413731 LONRF3Q496Y0 759 aa9.25□□□□□ -0.93
UPF3AP1-201ENST00000413731 PRR16Q569H4 304 aa9.25□□□□□ -0.93
UPF3AP1-201ENST00000413731 TMC5Q6UXY8 1006 aa9.25□□□□□ -0.93
UPF3AP1-201ENST00000413731 BLIDQ8IZY5 108 aa9.25□□□□□ -0.93
UPF3AP1-201ENST00000413731 FAM177A1Q8N128 213 aaPredicted RBP9.25□□□□□ -0.93
UPF3AP1-201ENST00000413731 ADSSL1Q8N142 457 aa9.25□□□□□ -0.93
UPF3AP1-201ENST00000413731 SLC22A17Q8WUG5 538 aa9.25□□□□□ -0.93
UPF3AP1-201ENST00000413731 LPPQ93052 612 aa9.25□□□□□ -0.93
UPF3AP1-201ENST00000413731 LENG9Q96B70 501 aa9.25□□□□□ -0.93
UPF3AP1-201ENST00000413731 SFXN1Q9H9B4 322 aa9.25□□□□□ -0.93
UPF3AP1-201ENST00000413731 BRMS1Q9HCU9 246 aa9.25□□□□□ -0.93
UPF3AP1-201ENST00000413731 PCDHA4Q9UN74 947 aa9.25□□□□□ -0.93
UPF3AP1-201ENST00000413731 KCNJ14Q9UNX9 436 aa9.25□□□□□ -0.93
UPF3AP1-201ENST00000413731 INPP5FQ9Y2H2 1132 aa9.25□□□□□ -0.93
UPF3AP1-201ENST00000413731 SAMM50Q9Y512 469 aa9.25□□□□□ -0.93
UPF3AP1-201ENST00000413731 PCDHA10Q9Y5I2 948 aa9.25□□□□□ -0.93
UPF3AP1-201ENST00000413731 PATJQ8NI35 1801 aa9.25□□□□□ -0.93
UPF3AP1-201ENST00000413731 CEP250Q9BV73 2442 aa9.25□□□□□ -0.93
UPF3AP1-201ENST00000413731 COL4A3Q01955 1670 aa9.24□□□□□ -0.93
UPF3AP1-201ENST00000413731 CCDC194A0A1B0GVG4 234 aa9.24□□□□□ -0.93
UPF3AP1-201ENST00000413731 TMEM150BA6NC51 233 aa9.24□□□□□ -0.93
UPF3AP1-201ENST00000413731 TK2O00142 265 aa9.24□□□□□ -0.93
UPF3AP1-201ENST00000413731 CHMP2AO43633 222 aa9.24□□□□□ -0.93
UPF3AP1-201ENST00000413731 AOC1P19801 751 aa9.24□□□□□ -0.93
UPF3AP1-201ENST00000413731 TMOD1P28289 359 aa9.24□□□□□ -0.93
UPF3AP1-201ENST00000413731 ALDH7A1P49419 539 aaKnown RBP9.24□□□□□ -0.93
UPF3AP1-201ENST00000413731 CLCN5P51795 746 aa9.24□□□□□ -0.93
UPF3AP1-201ENST00000413731 EMP3P54852 163 aa9.24□□□□□ -0.93
UPF3AP1-201ENST00000413731 ZNF211Q13398 564 aaPredicted RBP9.24□□□□□ -0.93
UPF3AP1-201ENST00000413731 MSS51Q4VC12 460 aa9.24□□□□□ -0.93
UPF3AP1-201ENST00000413731 ATAT1Q5SQI0 421 aa9.24□□□□□ -0.93
UPF3AP1-201ENST00000413731 GALNT17Q6IS24 598 aa9.24□□□□□ -0.93
UPF3AP1-201ENST00000413731 CCDC149Q6ZUS6 474 aa9.24□□□□□ -0.93
UPF3AP1-201ENST00000413731 DDX53Q86TM3 631 aaKnown RBP9.24□□□□□ -0.93
UPF3AP1-201ENST00000413731 CABP7Q86V35 215 aa9.24□□□□□ -0.93
UPF3AP1-201ENST00000413731 GLYCTKQ8IVS8 523 aa9.24□□□□□ -0.93
UPF3AP1-201ENST00000413731 CCDC105Q8IYK2 499 aa9.24□□□□□ -0.93
UPF3AP1-201ENST00000413731 ZNF687Q8N1G0 1237 aa9.24□□□□□ -0.93
UPF3AP1-201ENST00000413731 FAM184AQ8NB25 1140 aa9.24□□□□□ -0.93
UPF3AP1-201ENST00000413731 DAGLBQ8NCG7 672 aa9.24□□□□□ -0.93
UPF3AP1-201ENST00000413731 C1orf216Q8TAB5 229 aa9.24□□□□□ -0.93
UPF3AP1-201ENST00000413731 GJA10Q969M2 543 aa9.24□□□□□ -0.93
UPF3AP1-201ENST00000413731 IGSF21Q96ID5 467 aa9.24□□□□□ -0.93
UPF3AP1-201ENST00000413731 SPSB2Q99619 263 aa9.24□□□□□ -0.93
UPF3AP1-201ENST00000413731 LLPHQ9BRT6 129 aaKnown RBP9.24□□□□□ -0.93
UPF3AP1-201ENST00000413731 NRDE2Q9H7Z3 1164 aa9.24□□□□□ -0.93
UPF3AP1-201ENST00000413731 CYP26B1Q9NR63 512 aa9.24□□□□□ -0.93
UPF3AP1-201ENST00000413731 GJB4Q9NTQ9 266 aa9.24□□□□□ -0.93
UPF3AP1-201ENST00000413731 TBC1D22BQ9NU19 505 aa9.24□□□□□ -0.93
UPF3AP1-201ENST00000413731 TBC1D13Q9NVG8 400 aa9.24□□□□□ -0.93
UPF3AP1-201ENST00000413731 DACT1Q9NYF0 836 aa9.24□□□□□ -0.93
UPF3AP1-201ENST00000413731 DUSP12Q9UNI6 340 aa9.24□□□□□ -0.93
UPF3AP1-201ENST00000413731 CACNA1BQ00975 2339 aa9.23□□□□□ -0.93
UPF3AP1-201ENST00000413731 DMXL1Q9Y485 3027 aa9.23□□□□□ -0.93
UPF3AP1-201ENST00000413731 WDR64B1ANS9 1081 aa9.23□□□□□ -0.93
UPF3AP1-201ENST00000413731 MSH4O15457 936 aa9.23□□□□□ -0.93
UPF3AP1-201ENST00000413731 NARSO43776 548 aaKnown RBP9.23□□□□□ -0.93
UPF3AP1-201ENST00000413731 DXOO77932 396 aaKnown RBP9.23□□□□□ -0.93
UPF3AP1-201ENST00000413731 SSBP05455 408 aaKnown RBP eCLIP9.23□□□□□ -0.93
UPF3AP1-201ENST00000413731 FDPSP14324 419 aaKnown RBP9.23□□□□□ -0.93
UPF3AP1-201ENST00000413731 KRT2P35908 639 aa9.23□□□□□ -0.93
UPF3AP1-201ENST00000413731 PHKA2P46019 1235 aa9.23□□□□□ -0.93
UPF3AP1-201ENST00000413731 ID4P47928 161 aa9.23□□□□□ -0.93
UPF3AP1-201ENST00000413731 SLC11A1P49279 550 aa9.23□□□□□ -0.93
UPF3AP1-201ENST00000413731 MCM2P49736 904 aa9.23□□□□□ -0.93
UPF3AP1-201ENST00000413731 POLGP54098 1239 aaPredicted RBP9.23□□□□□ -0.93
UPF3AP1-201ENST00000413731 HMGN5P82970 282 aaKnown RBP9.23□□□□□ -0.93
UPF3AP1-201ENST00000413731 TBC1D8BQ0IIM8 1120 aa9.23□□□□□ -0.93
UPF3AP1-201ENST00000413731 BMS1Q14692 1282 aaKnown RBP9.23□□□□□ -0.93
UPF3AP1-201ENST00000413731 NONOQ15233 471 aaKnown RBP eCLIP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms