RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 FUT10Q6P4F1 479 aa10.68□□□□□ -0.7
RFFL-203ENST00000413582 PARM1Q6UWI2 310 aa10.68□□□□□ -0.7
RFFL-203ENST00000413582 GLYCTKQ8IVS8 523 aa10.68□□□□□ -0.7
RFFL-203ENST00000413582 GPR65Q8IYL9 337 aa10.68□□□□□ -0.7
RFFL-203ENST00000413582 ZNF579Q8NAF0 562 aaKnown RBP10.68□□□□□ -0.7
RFFL-203ENST00000413582 TBCKQ8TEA7 893 aa10.68□□□□□ -0.7
RFFL-203ENST00000413582 SLC7A3Q8WY07 619 aa10.68□□□□□ -0.7
RFFL-203ENST00000413582 EIF2AQ9BY44 585 aaKnown RBP10.68□□□□□ -0.7
RFFL-203ENST00000413582 BCO2Q9BYV7 579 aa10.68□□□□□ -0.7
RFFL-203ENST00000413582 GPR62Q9BZJ7 368 aa10.68□□□□□ -0.7
RFFL-203ENST00000413582 RNF39Q9H2S5 420 aa10.68□□□□□ -0.7
RFFL-203ENST00000413582 DHX33Q9H6R0 707 aaKnown RBP10.68□□□□□ -0.7
RFFL-203ENST00000413582 UBN1Q9NPG3 1134 aa10.68□□□□□ -0.7
RFFL-203ENST00000413582 SPATA6Q9NWH7 488 aaPredicted RBP10.68□□□□□ -0.7
RFFL-203ENST00000413582 VPS54Q9P1Q0 977 aa10.68□□□□□ -0.7
RFFL-203ENST00000413582 FNIP2Q9P278 1114 aa10.68□□□□□ -0.7
RFFL-203ENST00000413582 SMG5Q9UPR3 1016 aaKnown RBP10.68□□□□□ -0.7
RFFL-203ENST00000413582 MTF2Q9Y483 593 aaPredicted RBP10.68□□□□□ -0.7
RFFL-203ENST00000413582 PCDHGA2Q9Y5H1 932 aa10.68□□□□□ -0.7
RFFL-203ENST00000413582 ZFP37Q9Y6Q3 630 aaPredicted RBP10.68□□□□□ -0.7
RFFL-203ENST00000413582 VWA8A3KMH1 1905 aa10.68□□□□□ -0.7
RFFL-203ENST00000413582 CYP3A7-CYP3A51PA0A087WV96 503 aa10.67□□□□□ -0.7
RFFL-203ENST00000413582 EML1O00423 815 aa10.67□□□□□ -0.7
RFFL-203ENST00000413582 GAS2O43903 313 aaKnown RBP10.67□□□□□ -0.7
RFFL-203ENST00000413582 TSPAN1O60635 241 aa10.67□□□□□ -0.7
RFFL-203ENST00000413582 LILRB5O75023 590 aa10.67□□□□□ -0.7
RFFL-203ENST00000413582 SRGAP2CP0DJJ0 459 aa10.67□□□□□ -0.7
RFFL-203ENST00000413582 FSHRP23945 695 aa10.67□□□□□ -0.7
RFFL-203ENST00000413582 CYP3A7P24462 503 aa10.67□□□□□ -0.7
RFFL-203ENST00000413582 NTHL1P78549 312 aa10.67□□□□□ -0.7
RFFL-203ENST00000413582 PRKCQQ04759 706 aa10.67□□□□□ -0.7
RFFL-203ENST00000413582 LAMTOR4Q0VGL1 99 aa10.67□□□□□ -0.7
RFFL-203ENST00000413582 SNW1Q13573 536 aaKnown RBP10.67□□□□□ -0.7
RFFL-203ENST00000413582 NTRK3Q16288 839 aa10.67□□□□□ -0.7
RFFL-203ENST00000413582 GPR161Q8N6U8 529 aaKnown RBP10.67□□□□□ -0.7
RFFL-203ENST00000413582 ZBTB44Q8NCP5 570 aa10.67□□□□□ -0.7
RFFL-203ENST00000413582 CNNM3Q8NE01 707 aa10.67□□□□□ -0.7
RFFL-203ENST00000413582 PRPF31Q8WWY3 499 aaKnown RBP10.67□□□□□ -0.7
RFFL-203ENST00000413582 PSPC1Q8WXF1 523 aaKnown RBP10.67□□□□□ -0.7
RFFL-203ENST00000413582 NELL1Q92832 810 aa10.67□□□□□ -0.7
RFFL-203ENST00000413582 TMEM143Q96AN5 459 aa10.67□□□□□ -0.7
RFFL-203ENST00000413582 BORCS6Q96GS4 357 aa10.67□□□□□ -0.7
RFFL-203ENST00000413582 RNF26Q9BY78 433 aaPredicted RBP10.67□□□□□ -0.7
RFFL-203ENST00000413582 OSBPL6Q9BZF3 934 aa10.67□□□□□ -0.7
RFFL-203ENST00000413582 EPC1Q9H2F5 836 aa10.67□□□□□ -0.7
RFFL-203ENST00000413582 MIOSQ9NXC5 875 aa10.67□□□□□ -0.7
RFFL-203ENST00000413582 WRAP73Q9P2S5 460 aaPredicted RBP10.67□□□□□ -0.7
RFFL-203ENST00000413582 FBXW11Q9UKB1 542 aa10.67□□□□□ -0.7
RFFL-203ENST00000413582 CDH7Q9ULB5 785 aa10.67□□□□□ -0.7
RFFL-203ENST00000413582 HES2Q9Y543 173 aa10.67□□□□□ -0.7
RFFL-203ENST00000413582 ZFHX4Q86UP3 3567 aa10.66□□□□□ -0.7
RFFL-203ENST00000413582 ERLIN2O94905 339 aa10.66□□□□□ -0.7
RFFL-203ENST00000413582 CPA1P15085 419 aa10.66□□□□□ -0.7
RFFL-203ENST00000413582 SDHBP21912 280 aa10.66□□□□□ -0.7
RFFL-203ENST00000413582 TGM1P22735 817 aa10.66□□□□□ -0.7
RFFL-203ENST00000413582 MAGEA9P43362 315 aa10.66□□□□□ -0.7
RFFL-203ENST00000413582 CREMQ03060 361 aa10.66□□□□□ -0.7
RFFL-203ENST00000413582 LMNB2Q03252 620 aa10.66□□□□□ -0.7
RFFL-203ENST00000413582 CSTF1Q05048 431 aaKnown RBP10.66□□□□□ -0.7
RFFL-203ENST00000413582 KRT32Q14532 448 aa10.66□□□□□ -0.7
RFFL-203ENST00000413582 UBXN2BQ14CS0 331 aa10.66□□□□□ -0.7
RFFL-203ENST00000413582 USP41Q3LFD5 358 aa10.66□□□□□ -0.7
RFFL-203ENST00000413582 NOTUMQ6P988 496 aa10.66□□□□□ -0.7
RFFL-203ENST00000413582 MOXD1Q6UVY6 613 aa10.66□□□□□ -0.7
RFFL-203ENST00000413582 MTSS1LQ765P7 747 aa10.66□□□□□ -0.7
RFFL-203ENST00000413582 GRASPQ7Z6J2 395 aaPredicted RBP10.66□□□□□ -0.7
RFFL-203ENST00000413582 RNF149Q8NC42 400 aa10.66□□□□□ -0.7
RFFL-203ENST00000413582 GSTCDQ8NEC7 633 aa10.66□□□□□ -0.7
RFFL-203ENST00000413582 FGF13Q92913 245 aa10.66□□□□□ -0.7
RFFL-203ENST00000413582 BRF1Q92994 677 aa10.66□□□□□ -0.7
RFFL-203ENST00000413582 CCDC51Q96ER9 411 aa10.66□□□□□ -0.7
RFFL-203ENST00000413582 COLEC11Q9BWP8 271 aa10.66□□□□□ -0.7
RFFL-203ENST00000413582 NXF3Q9H4D5 531 aaKnown RBP10.66□□□□□ -0.7
RFFL-203ENST00000413582 LTB4R2Q9NPC1 389 aa10.66□□□□□ -0.7
RFFL-203ENST00000413582 PRMT8Q9NR22 394 aaPredicted RBP10.66□□□□□ -0.7
RFFL-203ENST00000413582 BMP2KQ9NSY1 1161 aaPredicted RBP10.66□□□□□ -0.7
RFFL-203ENST00000413582 ZSCAN32Q9NX65 697 aa10.66□□□□□ -0.7
RFFL-203ENST00000413582 ADAM28Q9UKQ2 775 aa10.66□□□□□ -0.7
RFFL-203ENST00000413582 VAV3Q9UKW4 847 aa10.66□□□□□ -0.7
RFFL-203ENST00000413582 CDV3Q9UKY7 258 aaKnown RBP10.66□□□□□ -0.7
RFFL-203ENST00000413582 PPME1Q9Y570 386 aa10.66□□□□□ -0.7
RFFL-203ENST00000413582 ZMYM2Q9UBW7 1377 aa10.65□□□□□ -0.7
RFFL-203ENST00000413582 FAM170BA6NMN3 283 aa10.65□□□□□ -0.7
RFFL-203ENST00000413582 PRR5-ARHGAP8B1AHC4 643 aa10.65□□□□□ -0.7
RFFL-203ENST00000413582 NR1I2O75469 434 aa10.65□□□□□ -0.7
RFFL-203ENST00000413582 HMGB1P09429 215 aaKnown RBP10.65□□□□□ -0.7
RFFL-203ENST00000413582 HNRNPA1P09651 372 aaKnown RBP eCLIP10.65□□□□□ -0.7
RFFL-203ENST00000413582 AXLP30530 894 aa10.65□□□□□ -0.7
RFFL-203ENST00000413582 RFC5P40937 340 aa10.65□□□□□ -0.7
RFFL-203ENST00000413582 QARSP47897 775 aaKnown RBP10.65□□□□□ -0.7
RFFL-203ENST00000413582 ARHGAP8P85298 464 aa10.65□□□□□ -0.7
RFFL-203ENST00000413582 FGD1P98174 961 aa10.65□□□□□ -0.7
RFFL-203ENST00000413582 AKAP17AQ02040 695 aaKnown RBP10.65□□□□□ -0.7
RFFL-203ENST00000413582 PPP2R5CQ13362 524 aa10.65□□□□□ -0.7
RFFL-203ENST00000413582 EMC2Q15006 297 aa10.65□□□□□ -0.7
RFFL-203ENST00000413582 PCBP1Q15365 356 aaKnown RBP eCLIP10.65□□□□□ -0.7
RFFL-203ENST00000413582 SLC44A4Q53GD3 710 aa10.65□□□□□ -0.7
RFFL-203ENST00000413582 RTP2Q5QGT7 225 aa10.65□□□□□ -0.7
RFFL-203ENST00000413582 PRSS55Q6UWB4 352 aaPredicted RBP10.65□□□□□ -0.7
RFFL-203ENST00000413582 RSPO2Q6UXX9 243 aaPredicted RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms