RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 LAMP2P13473 410 aa13.55□□□□□ -0.24
LIMS2-210ENST00000413578 ARF4P18085 180 aaPredicted RBP13.55□□□□□ -0.24
LIMS2-210ENST00000413578 HTR4Q13639 388 aa13.55□□□□□ -0.24
LIMS2-210ENST00000413578 MXD4Q14582 209 aaPredicted RBP13.55□□□□□ -0.24
LIMS2-210ENST00000413578 XKR9Q5GH70 373 aa13.55□□□□□ -0.24
LIMS2-210ENST00000413578 EARS2Q5JPH6 523 aaKnown RBP13.55□□□□□ -0.24
LIMS2-210ENST00000413578 PHLDB3Q6NSJ2 640 aa13.55□□□□□ -0.24
LIMS2-210ENST00000413578 FUT10Q6P4F1 479 aa13.55□□□□□ -0.24
LIMS2-210ENST00000413578 OTUD6AQ7L8S5 288 aa13.55□□□□□ -0.24
LIMS2-210ENST00000413578 POTEDQ86YR6 584 aa13.55□□□□□ -0.24
LIMS2-210ENST00000413578 OXER1Q8TDS5 423 aa13.55□□□□□ -0.24
LIMS2-210ENST00000413578 DYDC2Q96IM9 177 aa13.55□□□□□ -0.24
LIMS2-210ENST00000413578 CPB2Q96IY4 423 aa13.55□□□□□ -0.24
LIMS2-210ENST00000413578 B3GALT6Q96L58 329 aa13.55□□□□□ -0.24
LIMS2-210ENST00000413578 MTRQ99707 1265 aa13.55□□□□□ -0.24
LIMS2-210ENST00000413578 LARP6Q9BRS8 491 aaKnown RBP13.55□□□□□ -0.24
LIMS2-210ENST00000413578 NFKBIZQ9BYH8 718 aa13.55□□□□□ -0.24
LIMS2-210ENST00000413578 GPR62Q9BZJ7 368 aa13.55□□□□□ -0.24
LIMS2-210ENST00000413578 TM6SF1Q9BZW5 370 aa13.55□□□□□ -0.24
LIMS2-210ENST00000413578 SEMA4AQ9H3S1 761 aa13.55□□□□□ -0.24
LIMS2-210ENST00000413578 NXF3Q9H4D5 531 aaKnown RBP13.55□□□□□ -0.24
LIMS2-210ENST00000413578 ZSWIM4Q9H7M6 989 aa13.55□□□□□ -0.24
LIMS2-210ENST00000413578 TBC1D17Q9HA65 648 aa13.55□□□□□ -0.24
LIMS2-210ENST00000413578 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.55□□□□□ -0.24
LIMS2-210ENST00000413578 WDR87Q6ZQQ6 2873 aa13.55□□□□□ -0.24
LIMS2-210ENST00000413578 ZMYM2Q9UBW7 1377 aa13.55□□□□□ -0.24
LIMS2-210ENST00000413578 CCDC194A0A1B0GVG4 234 aa13.54□□□□□ -0.24
LIMS2-210ENST00000413578 CCNT1O60563 726 aaKnown RBP13.54□□□□□ -0.24
LIMS2-210ENST00000413578 SPATA31D3P0C874 917 aa13.54□□□□□ -0.24
LIMS2-210ENST00000413578 MYBP10242 640 aa13.54□□□□□ -0.24
LIMS2-210ENST00000413578 ARL2P36404 184 aa13.54□□□□□ -0.24
LIMS2-210ENST00000413578 CAPSQ13938 189 aa13.54□□□□□ -0.24
LIMS2-210ENST00000413578 CTTNQ14247 550 aaKnown RBP13.54□□□□□ -0.24
LIMS2-210ENST00000413578 ELMSAN1Q6PJG2 1045 aa13.54□□□□□ -0.24
LIMS2-210ENST00000413578 SPATA31D4Q6ZUB0 917 aa13.54□□□□□ -0.24
LIMS2-210ENST00000413578 GPR152Q8TDT2 470 aa13.54□□□□□ -0.24
LIMS2-210ENST00000413578 ASAP3Q8TDY4 903 aa13.54□□□□□ -0.24
LIMS2-210ENST00000413578 HSD17B14Q9BPX1 270 aa13.54□□□□□ -0.24
LIMS2-210ENST00000413578 PRKD2Q9BZL6 878 aa13.54□□□□□ -0.24
LIMS2-210ENST00000413578 SLKQ9H2G2 1235 aaPredicted RBP13.54□□□□□ -0.24
LIMS2-210ENST00000413578 SLC2A4RGQ9NR83 387 aa13.54□□□□□ -0.24
LIMS2-210ENST00000413578 GJB4Q9NTQ9 266 aa13.54□□□□□ -0.24
LIMS2-210ENST00000413578 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.54□□□□□ -0.24
LIMS2-210ENST00000413578 CA14Q9ULX7 337 aa13.54□□□□□ -0.24
LIMS2-210ENST00000413578 STK36Q9NRP7 1315 aa13.54□□□□□ -0.24
LIMS2-210ENST00000413578 DOCK8Q8NF50 2099 aa13.53□□□□□ -0.24
LIMS2-210ENST00000413578 INO80B-WBP1J3KQ70 363 aa13.53□□□□□ -0.24
LIMS2-210ENST00000413578 B4GALT5O43286 388 aa13.53□□□□□ -0.24
LIMS2-210ENST00000413578 LMNAP02545 664 aaKnown RBP13.53□□□□□ -0.24
LIMS2-210ENST00000413578 GLRA2P23416 452 aa13.53□□□□□ -0.24
LIMS2-210ENST00000413578 CYP4A11Q02928 519 aa13.53□□□□□ -0.24
LIMS2-210ENST00000413578 SCRN1Q12765 414 aa13.53□□□□□ -0.24
LIMS2-210ENST00000413578 STK3Q13188 491 aa13.53□□□□□ -0.24
LIMS2-210ENST00000413578 USP41Q3LFD5 358 aa13.53□□□□□ -0.24
LIMS2-210ENST00000413578 NCAPH2Q6IBW4 605 aa13.53□□□□□ -0.24
LIMS2-210ENST00000413578 CPLX2Q6PUV4 134 aaKnown RBP13.53□□□□□ -0.24
LIMS2-210ENST00000413578 PIK3AP1Q6ZUJ8 805 aa13.53□□□□□ -0.24
LIMS2-210ENST00000413578 PALB2Q86YC2 1186 aa13.53□□□□□ -0.24
LIMS2-210ENST00000413578 TNFRSF25Q93038 417 aa13.53□□□□□ -0.24
LIMS2-210ENST00000413578 NAP1L4Q99733 375 aaKnown RBP13.53□□□□□ -0.24
LIMS2-210ENST00000413578 COLEC11Q9BWP8 271 aa13.53□□□□□ -0.24
LIMS2-210ENST00000413578 ARHGEF3Q9NR81 526 aa13.53□□□□□ -0.24
LIMS2-210ENST00000413578 ADAM28Q9UKQ2 775 aa13.53□□□□□ -0.24
LIMS2-210ENST00000413578 CYP46A1Q9Y6A2 500 aa13.53□□□□□ -0.24
LIMS2-210ENST00000413578 CEP250Q9BV73 2442 aa13.52□□□□□ -0.24
LIMS2-210ENST00000413578 A0A1B0GUA9 196 aa13.52□□□□□ -0.25
LIMS2-210ENST00000413578 FAM205CA6NFA0 338 aa13.52□□□□□ -0.25
LIMS2-210ENST00000413578 NR1I2O75469 434 aa13.52□□□□□ -0.25
LIMS2-210ENST00000413578 ZMYND10O75800 440 aa13.52□□□□□ -0.25
LIMS2-210ENST00000413578 DGAT1O75907 488 aa13.52□□□□□ -0.25
LIMS2-210ENST00000413578 GLULP15104 373 aa13.52□□□□□ -0.25
LIMS2-210ENST00000413578 RPL17P18621 184 aaKnown RBP13.52□□□□□ -0.25
LIMS2-210ENST00000413578 GRIK3Q13003 919 aa13.52□□□□□ -0.25
LIMS2-210ENST00000413578 TFDP1Q14186 410 aa13.52□□□□□ -0.25
LIMS2-210ENST00000413578 RTP2Q5QGT7 225 aa13.52□□□□□ -0.25
LIMS2-210ENST00000413578 SLFN12Q8IYM2 578 aa13.52□□□□□ -0.25
LIMS2-210ENST00000413578 EIF2AK1Q9BQI3 630 aaKnown RBP13.52□□□□□ -0.25
LIMS2-210ENST00000413578 ANKEF1Q9NU02 776 aa13.52□□□□□ -0.25
LIMS2-210ENST00000413578 FBXW11Q9UKB1 542 aa13.52□□□□□ -0.25
LIMS2-210ENST00000413578 NUMBLQ9Y6R0 609 aa13.52□□□□□ -0.25
LIMS2-210ENST00000413578 R4GN57 208 aa13.52□□□□□ -0.25
LIMS2-210ENST00000413578 NCOR2Q9Y618 2525 aa13.52□□□□□ -0.25
LIMS2-210ENST00000413578 CTDNEP1O95476 244 aa13.51□□□□□ -0.25
LIMS2-210ENST00000413578 DCNP07585 359 aaKnown RBP13.51□□□□□ -0.25
LIMS2-210ENST00000413578 AKAP5P24588 427 aa13.51□□□□□ -0.25
LIMS2-210ENST00000413578 RARRES1P49788 294 aa13.51□□□□□ -0.25
LIMS2-210ENST00000413578 STARD6P59095 220 aa13.51□□□□□ -0.25
LIMS2-210ENST00000413578 CREMQ03060 361 aa13.51□□□□□ -0.25
LIMS2-210ENST00000413578 NCBP1Q09161 790 aaKnown RBP13.51□□□□□ -0.25
LIMS2-210ENST00000413578 NAB2Q15742 525 aa13.51□□□□□ -0.25
LIMS2-210ENST00000413578 SLC27A1Q6PCB7 646 aa13.51□□□□□ -0.25
LIMS2-210ENST00000413578 PPP4R3CPQ6ZMV5 832 aa13.51□□□□□ -0.25
LIMS2-210ENST00000413578 GET4Q7L5D6 327 aaPredicted RBP13.51□□□□□ -0.25
LIMS2-210ENST00000413578 CDR2LQ86X02 465 aaPredicted RBP13.51□□□□□ -0.25
LIMS2-210ENST00000413578 TPH2Q8IWU9 490 aa13.51□□□□□ -0.25
LIMS2-210ENST00000413578 MAML2Q8IZL2 1156 aaPredicted RBP13.51□□□□□ -0.25
LIMS2-210ENST00000413578 RIN2Q8WYP3 895 aaPredicted RBP13.51□□□□□ -0.25
LIMS2-210ENST00000413578 PIK3R5Q8WYR1 880 aa13.51□□□□□ -0.25
LIMS2-210ENST00000413578 RMDN1Q96DB5 314 aa13.51□□□□□ -0.25
LIMS2-210ENST00000413578 CLSTN3Q9BQT9 956 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms