RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 CERKLQ49MI3 558 aaPredicted RBP18.9■□□□□ 0.62
SDCBP-202ENST00000413219 CCDC25Q86WR0 208 aa18.9■□□□□ 0.62
SDCBP-202ENST00000413219 SIAH1Q8IUQ4 282 aa18.9■□□□□ 0.62
SDCBP-202ENST00000413219 SYCP3Q8IZU3 236 aa18.9■□□□□ 0.62
SDCBP-202ENST00000413219 PCDHB18PQ96TA0 734 aa18.9■□□□□ 0.62
SDCBP-202ENST00000413219 RXFP1Q9HBX9 757 aa18.9■□□□□ 0.62
SDCBP-202ENST00000413219 AAASQ9NRG9 546 aa18.9■□□□□ 0.62
SDCBP-202ENST00000413219 UVRAGQ9P2Y5 699 aa18.9■□□□□ 0.62
SDCBP-202ENST00000413219 GTF3C4Q9UKN8 822 aa18.9■□□□□ 0.62
SDCBP-202ENST00000413219 PTPN22Q9Y2R2 807 aa18.9■□□□□ 0.62
SDCBP-202ENST00000413219 F5H6K3 240 aa18.89■□□□□ 0.62
SDCBP-202ENST00000413219 IGF2BP3O00425 579 aaKnown RBP eCLIP18.89■□□□□ 0.62
SDCBP-202ENST00000413219 RPSAP08865 295 aaKnown RBP18.89■□□□□ 0.62
SDCBP-202ENST00000413219 CHRNB2P17787 502 aa18.89■□□□□ 0.62
SDCBP-202ENST00000413219 MAN1A1P33908 653 aa18.89■□□□□ 0.62
SDCBP-202ENST00000413219 SKIV2L2P42285 1042 aaKnown RBP18.89■□□□□ 0.62
SDCBP-202ENST00000413219 MAP2K1Q02750 393 aaPredicted RBP18.89■□□□□ 0.62
SDCBP-202ENST00000413219 CAV1Q03135 178 aa18.89■□□□□ 0.62
SDCBP-202ENST00000413219 ALCAMQ13740 583 aa18.89■□□□□ 0.62
SDCBP-202ENST00000413219 APOBEC3HQ6NTF7 200 aaKnown RBP18.89■□□□□ 0.62
SDCBP-202ENST00000413219 C12orf56Q8IXR9 622 aa18.89■□□□□ 0.62
SDCBP-202ENST00000413219 ZNF564Q8TBZ8 553 aaPredicted RBP18.89■□□□□ 0.62
SDCBP-202ENST00000413219 EPS8L1Q8TE68 723 aa18.89■□□□□ 0.62
SDCBP-202ENST00000413219 MAIP1Q8WWC4 291 aa18.89■□□□□ 0.62
SDCBP-202ENST00000413219 TEKT1Q969V4 418 aa18.89■□□□□ 0.62
SDCBP-202ENST00000413219 KLHL29Q96CT2 875 aa18.89■□□□□ 0.62
SDCBP-202ENST00000413219 NOCTQ9UK39 431 aaKnown RBP18.89■□□□□ 0.62
SDCBP-202ENST00000413219 POTEJP0CG39 1038 aa18.89■□□□□ 0.61
SDCBP-202ENST00000413219 VAMP7P51809 220 aa18.89■□□□□ 0.61
SDCBP-202ENST00000413219 ICA1Q05084 483 aa18.89■□□□□ 0.61
SDCBP-202ENST00000413219 SF3A3Q12874 501 aaKnown RBP eCLIP18.89■□□□□ 0.61
SDCBP-202ENST00000413219 TRAF1Q13077 416 aa18.89■□□□□ 0.61
SDCBP-202ENST00000413219 NUGGCQ68CJ6 796 aa18.89■□□□□ 0.61
SDCBP-202ENST00000413219 FAM71AQ8IYT1 594 aa18.89■□□□□ 0.61
SDCBP-202ENST00000413219 C7orf43Q8WVR3 580 aa18.89■□□□□ 0.61
SDCBP-202ENST00000413219 DDX23Q9BUQ8 820 aaKnown RBP18.89■□□□□ 0.61
SDCBP-202ENST00000413219 WDR18Q9BV38 432 aa18.89■□□□□ 0.61
SDCBP-202ENST00000413219 TAF1LQ8IZX4 1826 aa18.89■□□□□ 0.61
SDCBP-202ENST00000413219 MAPK13O15264 365 aa18.88■□□□□ 0.61
SDCBP-202ENST00000413219 TP73O15350 636 aa18.88■□□□□ 0.61
SDCBP-202ENST00000413219 TTC4O95801 387 aa18.88■□□□□ 0.61
SDCBP-202ENST00000413219 HOXA13P31271 388 aaPredicted RBP18.88■□□□□ 0.61
SDCBP-202ENST00000413219 KCNJ1P48048 391 aa18.88■□□□□ 0.61
SDCBP-202ENST00000413219 SNAP25P60880 206 aa18.88■□□□□ 0.61
SDCBP-202ENST00000413219 CCDC15Q0P6D6 951 aa18.88■□□□□ 0.61
SDCBP-202ENST00000413219 NAA25Q14CX7 972 aa18.88■□□□□ 0.61
SDCBP-202ENST00000413219 LRRC14Q15048 493 aa18.88■□□□□ 0.61
SDCBP-202ENST00000413219 RNF43Q68DV7 783 aa18.88■□□□□ 0.61
SDCBP-202ENST00000413219 TMEM179Q6ZVK1 233 aa18.88■□□□□ 0.61
SDCBP-202ENST00000413219 ASRGL1Q7L266 308 aa18.88■□□□□ 0.61
SDCBP-202ENST00000413219 PSPC1Q8WXF1 523 aaKnown RBP18.88■□□□□ 0.61
SDCBP-202ENST00000413219 GRAMD1AQ96CP6 724 aa18.88■□□□□ 0.61
SDCBP-202ENST00000413219 SNF8Q96H20 258 aa18.88■□□□□ 0.61
SDCBP-202ENST00000413219 NUP85Q9BW27 656 aa18.88■□□□□ 0.61
SDCBP-202ENST00000413219 TMEM206Q9H813 350 aa18.88■□□□□ 0.61
SDCBP-202ENST00000413219 LGALS13Q9UHV8 139 aa18.88■□□□□ 0.61
SDCBP-202ENST00000413219 SGPL1O95470 568 aa18.88■□□□□ 0.61
SDCBP-202ENST00000413219 MAPTP10636 758 aaKnown RBP18.88■□□□□ 0.61
SDCBP-202ENST00000413219 PDE6BP35913 854 aa18.88■□□□□ 0.61
SDCBP-202ENST00000413219 LMNB2Q03252 620 aa18.88■□□□□ 0.61
SDCBP-202ENST00000413219 KRT17Q04695 432 aa18.88■□□□□ 0.61
SDCBP-202ENST00000413219 NFIAQ12857 509 aa18.88■□□□□ 0.61
SDCBP-202ENST00000413219 PTK6Q13882 451 aa18.88■□□□□ 0.61
SDCBP-202ENST00000413219 NOP9Q86U38 636 aaKnown RBP18.88■□□□□ 0.61
SDCBP-202ENST00000413219 MGARPQ8TDB4 240 aa18.88■□□□□ 0.61
SDCBP-202ENST00000413219 WDR11Q9BZH6 1224 aa18.88■□□□□ 0.61
SDCBP-202ENST00000413219 L3MBTL1Q9Y468 752 aa18.88■□□□□ 0.61
SDCBP-202ENST00000413219 ZBTB39O15060 712 aa18.87■□□□□ 0.61
SDCBP-202ENST00000413219 WFS1O76024 890 aa18.87■□□□□ 0.61
SDCBP-202ENST00000413219 ACSL3O95573 720 aa18.87■□□□□ 0.61
SDCBP-202ENST00000413219 NDUFB10O96000 172 aa18.87■□□□□ 0.61
SDCBP-202ENST00000413219 CCNB1P14635 433 aa18.87■□□□□ 0.61
SDCBP-202ENST00000413219 ADRA2BP18089 450 aa18.87■□□□□ 0.61
SDCBP-202ENST00000413219 PPP3CAQ08209 521 aa18.87■□□□□ 0.61
SDCBP-202ENST00000413219 ACVR2BQ13705 512 aa18.87■□□□□ 0.61
SDCBP-202ENST00000413219 ZNF746Q6NUN9 644 aaPredicted RBP18.87■□□□□ 0.61
SDCBP-202ENST00000413219 TATDN1Q6P1N9 297 aa18.87■□□□□ 0.61
SDCBP-202ENST00000413219 SP8Q8IXZ3 490 aa18.87■□□□□ 0.61
SDCBP-202ENST00000413219 FAXDC2Q96IV6 333 aa18.87■□□□□ 0.61
SDCBP-202ENST00000413219 MAGEB18Q96M61 343 aa18.87■□□□□ 0.61
SDCBP-202ENST00000413219 TRIM7Q9C029 511 aa18.87■□□□□ 0.61
SDCBP-202ENST00000413219 ACTL7BQ9Y614 415 aa18.87■□□□□ 0.61
SDCBP-202ENST00000413219 SIPA1L1O43166 1804 aa18.87■□□□□ 0.61
SDCBP-202ENST00000413219 CHMP2AO43633 222 aa18.86■□□□□ 0.61
SDCBP-202ENST00000413219 GAS7O60861 476 aa18.86■□□□□ 0.61
SDCBP-202ENST00000413219 SCNN1DP51172 638 aa18.86■□□□□ 0.61
SDCBP-202ENST00000413219 DLG4P78352 724 aa18.86■□□□□ 0.61
SDCBP-202ENST00000413219 IKQ13123 557 aaPredicted RBP18.86■□□□□ 0.61
SDCBP-202ENST00000413219 SGO2Q562F6 1265 aa18.86■□□□□ 0.61
SDCBP-202ENST00000413219 ARHGEF18Q6ZSZ5 1173 aa18.86■□□□□ 0.61
SDCBP-202ENST00000413219 OTUD6AQ7L8S5 288 aa18.86■□□□□ 0.61
SDCBP-202ENST00000413219 ZFPM1Q8IX07 1006 aa18.86■□□□□ 0.61
SDCBP-202ENST00000413219 RDH13Q8NBN7 331 aa18.86■□□□□ 0.61
SDCBP-202ENST00000413219 GRK7Q8WTQ7 553 aa18.86■□□□□ 0.61
SDCBP-202ENST00000413219 TRIM6Q9C030 488 aaPredicted RBP18.86■□□□□ 0.61
SDCBP-202ENST00000413219 PI4KBQ9UBF8 816 aa18.86■□□□□ 0.61
SDCBP-202ENST00000413219 ZNF536O15090 1300 aa18.86■□□□□ 0.61
SDCBP-202ENST00000413219 ADGRA3Q8IWK6 1321 aa18.86■□□□□ 0.61
SDCBP-202ENST00000413219 SERPINB2P05120 415 aa18.86■□□□□ 0.61
SDCBP-202ENST00000413219 KRT16P08779 473 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms