RNA–Protein interactions for RNA: ENST00000411827.1

CDC42-204, Transcript of cell division cycle 42, humanhuman

TSL 3

Gene CDC42, Length 597 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-204ENST00000411827 ADSSP30520 456 aa20.36■□□□□ 0.85
CDC42-204ENST00000411827 CD52P31358 61 aa20.36■□□□□ 0.85
CDC42-204ENST00000411827 CYP2C18P33260 490 aa20.36■□□□□ 0.85
CDC42-204ENST00000411827 PSMC2P35998 433 aaKnown RBP20.36■□□□□ 0.85
CDC42-204ENST00000411827 MBTPS1Q14703 1052 aa20.36■□□□□ 0.85
CDC42-204ENST00000411827 TWF2Q6IBS0 349 aaKnown RBP20.36■□□□□ 0.85
CDC42-204ENST00000411827 SLC39A4Q6P5W5 647 aa20.36■□□□□ 0.85
CDC42-204ENST00000411827 GPD1LQ8N335 351 aa20.36■□□□□ 0.85
CDC42-204ENST00000411827 ANKRD20A12PQ8NF67 263 aa20.36■□□□□ 0.85
CDC42-204ENST00000411827 TSPAN18Q96SJ8 248 aa20.36■□□□□ 0.85
CDC42-204ENST00000411827 DUSP9Q99956 384 aaKnown RBP20.36■□□□□ 0.85
CDC42-204ENST00000411827 PPP1R12CQ9BZL4 782 aa20.36■□□□□ 0.85
CDC42-204ENST00000411827 TRIM6Q9C030 488 aaPredicted RBP20.36■□□□□ 0.85
CDC42-204ENST00000411827 WNT8AQ9H1J5 351 aa20.36■□□□□ 0.85
CDC42-204ENST00000411827 HSPBP1Q9NZL4 362 aa20.36■□□□□ 0.85
CDC42-204ENST00000411827 ANKFY1Q9P2R3 1169 aa20.36■□□□□ 0.85
CDC42-204ENST00000411827 NFE2L3Q9Y4A8 694 aa20.36■□□□□ 0.85
CDC42-204ENST00000411827 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.36■□□□□ 0.85
CDC42-204ENST00000411827 TRIM43BA6NCK2 446 aa20.35■□□□□ 0.85
CDC42-204ENST00000411827 NBNO60934 754 aa20.35■□□□□ 0.85
CDC42-204ENST00000411827 ZNF623O75123 536 aa20.35■□□□□ 0.85
CDC42-204ENST00000411827 EPB41P11171 864 aaKnown RBP20.35■□□□□ 0.85
CDC42-204ENST00000411827 PMS1P54277 932 aaKnown RBP20.35■□□□□ 0.85
CDC42-204ENST00000411827 STX17P56962 302 aa20.35■□□□□ 0.85
CDC42-204ENST00000411827 DSC3Q14574 896 aa20.35■□□□□ 0.85
CDC42-204ENST00000411827 IQCB1Q15051 598 aa20.35■□□□□ 0.85
CDC42-204ENST00000411827 SURF1Q15526 300 aa20.35■□□□□ 0.85
CDC42-204ENST00000411827 AOPEPQ8N6M6 819 aa20.35■□□□□ 0.85
CDC42-204ENST00000411827 TRIM43Q96BQ3 446 aaPredicted RBP20.35■□□□□ 0.85
CDC42-204ENST00000411827 SRRTQ9BXP5 876 aaKnown RBP20.35■□□□□ 0.85
CDC42-204ENST00000411827 MAGEC2Q9UBF1 373 aaPredicted RBP20.35■□□□□ 0.85
CDC42-204ENST00000411827 TRIM49BA6NDI0 452 aa20.34■□□□□ 0.85
CDC42-204ENST00000411827 ZNF233A6NK53 670 aa20.34■□□□□ 0.85
CDC42-204ENST00000411827 ABLIM1O14639 778 aa20.34■□□□□ 0.85
CDC42-204ENST00000411827 CLTAP09496 248 aa20.34■□□□□ 0.85
CDC42-204ENST00000411827 EEF1GP26641 437 aaKnown RBP20.34■□□□□ 0.85
CDC42-204ENST00000411827 CCL23P55773 120 aa20.34■□□□□ 0.85
CDC42-204ENST00000411827 MARSP56192 900 aaKnown RBP20.34■□□□□ 0.85
CDC42-204ENST00000411827 PPP2R3AQ06190 1150 aa20.34■□□□□ 0.85
CDC42-204ENST00000411827 PPIGQ13427 754 aaKnown RBP eCLIP20.34■□□□□ 0.85
CDC42-204ENST00000411827 CNKSR3Q6P9H4 555 aa20.34■□□□□ 0.85
CDC42-204ENST00000411827 LRRC55Q6ZSA7 311 aa20.34■□□□□ 0.85
CDC42-204ENST00000411827 SLC24A5Q71RS6 500 aa20.34■□□□□ 0.85
CDC42-204ENST00000411827 FRMD5Q7Z6J6 570 aa20.34■□□□□ 0.85
CDC42-204ENST00000411827 CD302Q8IX05 232 aa20.34■□□□□ 0.85
CDC42-204ENST00000411827 DHX40Q8IX18 779 aaKnown RBP20.34■□□□□ 0.85
CDC42-204ENST00000411827 CBWD1Q9BRT8 395 aa20.34■□□□□ 0.85
CDC42-204ENST00000411827 CCDC94Q9BW85 323 aaPredicted RBP20.34■□□□□ 0.85
CDC42-204ENST00000411827 CDT1Q9H211 546 aa20.34■□□□□ 0.85
CDC42-204ENST00000411827 TSPYL2Q9H2G4 693 aaPredicted RBP20.34■□□□□ 0.85
CDC42-204ENST00000411827 UBN1Q9NPG3 1134 aa20.34■□□□□ 0.85
CDC42-204ENST00000411827 A0A0U1RQF3 1178 aa20.33■□□□□ 0.85
CDC42-204ENST00000411827 CLIC2O15247 247 aa20.33■□□□□ 0.85
CDC42-204ENST00000411827 EDN1P05305 212 aa20.33■□□□□ 0.85
CDC42-204ENST00000411827 ACTN1P12814 892 aa20.33■□□□□ 0.85
CDC42-204ENST00000411827 FGFR4P22455 802 aa20.33■□□□□ 0.85
CDC42-204ENST00000411827 GRM5P41594 1212 aa20.33■□□□□ 0.85
CDC42-204ENST00000411827 CYP2J2P51589 502 aa20.33■□□□□ 0.85
CDC42-204ENST00000411827 INTS8Q75QN2 995 aaKnown RBP20.33■□□□□ 0.85
CDC42-204ENST00000411827 PGBD4Q96DM1 585 aa20.33■□□□□ 0.85
CDC42-204ENST00000411827 CPB2Q96IY4 423 aa20.33■□□□□ 0.85
CDC42-204ENST00000411827 MED15Q96RN5 788 aa20.33■□□□□ 0.85
CDC42-204ENST00000411827 PLEKHA5Q9HAU0 1116 aa20.33■□□□□ 0.85
CDC42-204ENST00000411827 RGS18Q9NS28 235 aa20.33■□□□□ 0.85
CDC42-204ENST00000411827 TOPORSQ9NS56 1045 aaPredicted RBP20.33■□□□□ 0.85
CDC42-204ENST00000411827 UMODL1Q5DID0 1318 aa20.32■□□□□ 0.84
CDC42-204ENST00000411827 ABHD14A-ACY1A0A1B0GW23 586 aa20.32■□□□□ 0.84
CDC42-204ENST00000411827 TTLL13PA6NNM8 815 aa20.32■□□□□ 0.84
CDC42-204ENST00000411827 EOMESO95936 686 aa20.32■□□□□ 0.84
CDC42-204ENST00000411827 TPM2P07951 284 aa20.32■□□□□ 0.84
CDC42-204ENST00000411827 KRT13P13646 458 aa20.32■□□□□ 0.84
CDC42-204ENST00000411827 YARSP54577 528 aaKnown RBP20.32■□□□□ 0.84
CDC42-204ENST00000411827 MCCD1P59942 119 aaPredicted RBP20.32■□□□□ 0.84
CDC42-204ENST00000411827 IKBKEQ14164 716 aa20.32■□□□□ 0.84
CDC42-204ENST00000411827 NCAPHQ15003 741 aa20.32■□□□□ 0.84
CDC42-204ENST00000411827 SNRNP35Q16560 246 aaKnown RBP20.32■□□□□ 0.84
CDC42-204ENST00000411827 UVSSAQ2YD98 709 aa20.32■□□□□ 0.84
CDC42-204ENST00000411827 CEP135Q66GS9 1140 aa20.32■□□□□ 0.84
CDC42-204ENST00000411827 MRPL10Q7Z7H8 261 aaKnown RBP20.32■□□□□ 0.84
CDC42-204ENST00000411827 C7orf61Q8IZ16 206 aa20.32■□□□□ 0.84
CDC42-204ENST00000411827 DBF4BQ8NFT6 615 aa20.32■□□□□ 0.84
CDC42-204ENST00000411827 DPF3Q92784 378 aa20.32■□□□□ 0.84
CDC42-204ENST00000411827 ZBTB45Q96K62 511 aaPredicted RBP20.32■□□□□ 0.84
CDC42-204ENST00000411827 ADAM2Q99965 735 aa20.32■□□□□ 0.84
CDC42-204ENST00000411827 LBHD1Q9BQE6 289 aaPredicted RBP20.32■□□□□ 0.84
CDC42-204ENST00000411827 TMX1Q9H3N1 280 aa20.32■□□□□ 0.84
CDC42-204ENST00000411827 ELAC1Q9H777 363 aaKnown RBP20.32■□□□□ 0.84
CDC42-204ENST00000411827 FAM105AQ9NUU6 356 aa20.32■□□□□ 0.84
CDC42-204ENST00000411827 ARMCX3Q9UH62 379 aaPredicted RBP20.32■□□□□ 0.84
CDC42-204ENST00000411827 TANC1Q9C0D5 1861 aa20.32■□□□□ 0.84
CDC42-204ENST00000411827 STX10O60499 249 aa20.31■□□□□ 0.84
CDC42-204ENST00000411827 BAIAP3O94812 1187 aa20.31■□□□□ 0.84
CDC42-204ENST00000411827 IL18RAPO95256 599 aa20.31■□□□□ 0.84
CDC42-204ENST00000411827 CDK11BP21127 795 aaKnown RBP20.31■□□□□ 0.84
CDC42-204ENST00000411827 FAM189BP81408 668 aa20.31■□□□□ 0.84
CDC42-204ENST00000411827 GPNMBQ14956 572 aa20.31■□□□□ 0.84
CDC42-204ENST00000411827 CDKAL1Q5VV42 579 aa20.31■□□□□ 0.84
CDC42-204ENST00000411827 EEF1DP3Q658K8 133 aa20.31■□□□□ 0.84
CDC42-204ENST00000411827 ZBTB33Q86T24 672 aa20.31■□□□□ 0.84
CDC42-204ENST00000411827 FAM186BQ8IYM0 893 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms