RNA–Protein interactions for RNA: ENST00000410704.1

RN7SKP54-201, Transcript of RNA, 7SK small nuclear pseudogene 54, humanhuman

BASIC

Gene RN7SKP54, Length 269 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP54-201ENST00000410704 NPTXRO95502 500 aa11.02□□□□□ -0.65
RN7SKP54-201ENST00000410704 CXCL10P02778 98 aa11.02□□□□□ -0.65
RN7SKP54-201ENST00000410704 EPB41P11171 864 aaKnown RBP11.02□□□□□ -0.65
RN7SKP54-201ENST00000410704 SKIP12755 728 aa11.02□□□□□ -0.65
RN7SKP54-201ENST00000410704 PROZP22891 400 aa11.02□□□□□ -0.65
RN7SKP54-201ENST00000410704 RAB27AP51159 221 aa11.02□□□□□ -0.65
RN7SKP54-201ENST00000410704 PPIGQ13427 754 aaKnown RBP eCLIP11.02□□□□□ -0.65
RN7SKP54-201ENST00000410704 EEF1DP3Q658K8 133 aa11.02□□□□□ -0.65
RN7SKP54-201ENST00000410704 CEP135Q66GS9 1140 aa11.02□□□□□ -0.65
RN7SKP54-201ENST00000410704 CNKSR3Q6P9H4 555 aa11.02□□□□□ -0.65
RN7SKP54-201ENST00000410704 CDR2LQ86X02 465 aaPredicted RBP11.02□□□□□ -0.65
RN7SKP54-201ENST00000410704 FAM114A1Q8IWE2 563 aa11.02□□□□□ -0.65
RN7SKP54-201ENST00000410704 XXYLT1Q8NBI6 393 aa11.02□□□□□ -0.65
RN7SKP54-201ENST00000410704 DBF4BQ8NFT6 615 aa11.02□□□□□ -0.65
RN7SKP54-201ENST00000410704 TMEM174Q8WUU8 243 aa11.02□□□□□ -0.65
RN7SKP54-201ENST00000410704 DUSP9Q99956 384 aaKnown RBP11.02□□□□□ -0.65
RN7SKP54-201ENST00000410704 ADAM2Q99965 735 aa11.02□□□□□ -0.65
RN7SKP54-201ENST00000410704 CBWD1Q9BRT8 395 aa11.02□□□□□ -0.65
RN7SKP54-201ENST00000410704 FAM213AQ9BRX8 229 aa11.02□□□□□ -0.65
RN7SKP54-201ENST00000410704 SRRTQ9BXP5 876 aaKnown RBP11.02□□□□□ -0.65
RN7SKP54-201ENST00000410704 OSBPL7Q9BZF2 842 aa11.02□□□□□ -0.65
RN7SKP54-201ENST00000410704 CDT1Q9H211 546 aa11.02□□□□□ -0.65
RN7SKP54-201ENST00000410704 THAP9Q9H5L6 903 aa11.02□□□□□ -0.65
RN7SKP54-201ENST00000410704 CBX8Q9HC52 389 aa11.02□□□□□ -0.65
RN7SKP54-201ENST00000410704 PTPRHQ9HD43 1115 aa11.02□□□□□ -0.65
RN7SKP54-201ENST00000410704 C1orf112Q9NSG2 853 aa11.02□□□□□ -0.65
RN7SKP54-201ENST00000410704 DMAC2Q9NW81 257 aa11.02□□□□□ -0.65
RN7SKP54-201ENST00000410704 RNF216Q9NWF9 866 aaPredicted RBP11.02□□□□□ -0.65
RN7SKP54-201ENST00000410704 MAGEC2Q9UBF1 373 aaPredicted RBP11.02□□□□□ -0.65
RN7SKP54-201ENST00000410704 NFE2L3Q9Y4A8 694 aa11.02□□□□□ -0.65
RN7SKP54-201ENST00000410704 TULP1O00294 542 aaPredicted RBP11.01□□□□□ -0.65
RN7SKP54-201ENST00000410704 ABLIM1O14639 778 aa11.01□□□□□ -0.65
RN7SKP54-201ENST00000410704 EXTL3O43909 919 aa11.01□□□□□ -0.65
RN7SKP54-201ENST00000410704 GNA14O95837 355 aa11.01□□□□□ -0.65
RN7SKP54-201ENST00000410704 ACTN1P12814 892 aa11.01□□□□□ -0.65
RN7SKP54-201ENST00000410704 CSF2RAP15509 400 aa11.01□□□□□ -0.65
RN7SKP54-201ENST00000410704 ITGB8P26012 769 aa11.01□□□□□ -0.65
RN7SKP54-201ENST00000410704 ADSSP30520 456 aa11.01□□□□□ -0.65
RN7SKP54-201ENST00000410704 PSMC2P35998 433 aaKnown RBP11.01□□□□□ -0.65
RN7SKP54-201ENST00000410704 FPGSQ05932 587 aa11.01□□□□□ -0.65
RN7SKP54-201ENST00000410704 IKBKEQ14164 716 aa11.01□□□□□ -0.65
RN7SKP54-201ENST00000410704 DSC3Q14574 896 aa11.01□□□□□ -0.65
RN7SKP54-201ENST00000410704 GPNMBQ14956 572 aa11.01□□□□□ -0.65
RN7SKP54-201ENST00000410704 CCDC40Q4G0X9 1142 aa11.01□□□□□ -0.65
RN7SKP54-201ENST00000410704 FILIP1Q7Z7B0 1213 aa11.01□□□□□ -0.65
RN7SKP54-201ENST00000410704 THNSL1Q8IYQ7 743 aa11.01□□□□□ -0.65
RN7SKP54-201ENST00000410704 GPD1LQ8N335 351 aa11.01□□□□□ -0.65
RN7SKP54-201ENST00000410704 BADQ92934 168 aa11.01□□□□□ -0.65
RN7SKP54-201ENST00000410704 SAAL1Q96ER3 474 aa11.01□□□□□ -0.65
RN7SKP54-201ENST00000410704 CCDC94Q9BW85 323 aaPredicted RBP11.01□□□□□ -0.65
RN7SKP54-201ENST00000410704 TMX1Q9H3N1 280 aa11.01□□□□□ -0.65
RN7SKP54-201ENST00000410704 IL23AQ9NPF7 189 aa11.01□□□□□ -0.65
RN7SKP54-201ENST00000410704 FAM105AQ9NUU6 356 aa11.01□□□□□ -0.65
RN7SKP54-201ENST00000410704 ZMYND8Q9ULU4 1186 aaPredicted RBP11.01□□□□□ -0.65
RN7SKP54-201ENST00000410704 GOLGA8IPA6NC78 632 aa11□□□□□ -0.65
RN7SKP54-201ENST00000410704 ZNF233A6NK53 670 aa11□□□□□ -0.65
RN7SKP54-201ENST00000410704 GOLGA8JA6NMD2 632 aa11□□□□□ -0.65
RN7SKP54-201ENST00000410704 SLC16A3O15427 465 aaKnown RBP11□□□□□ -0.65
RN7SKP54-201ENST00000410704 MGEA5O60502 916 aa11□□□□□ -0.65
RN7SKP54-201ENST00000410704 EFCAB14O75071 495 aa11□□□□□ -0.65
RN7SKP54-201ENST00000410704 CLTAP09496 248 aa11□□□□□ -0.65
RN7SKP54-201ENST00000410704 KRT13P13646 458 aa11□□□□□ -0.65
RN7SKP54-201ENST00000410704 SYN1P17600 705 aa11□□□□□ -0.65
RN7SKP54-201ENST00000410704 CDK11BP21127 795 aaKnown RBP11□□□□□ -0.65
RN7SKP54-201ENST00000410704 GRM5P41594 1212 aa11□□□□□ -0.65
RN7SKP54-201ENST00000410704 ACOT2P49753 483 aa11□□□□□ -0.65
RN7SKP54-201ENST00000410704 YARSP54577 528 aaKnown RBP11□□□□□ -0.65
RN7SKP54-201ENST00000410704 OSTNP61366 133 aa11□□□□□ -0.65
RN7SKP54-201ENST00000410704 IQCB1Q15051 598 aa11□□□□□ -0.65
RN7SKP54-201ENST00000410704 SNRNP35Q16560 246 aaKnown RBP11□□□□□ -0.65
RN7SKP54-201ENST00000410704 UBXN11Q5T124 520 aa11□□□□□ -0.65
RN7SKP54-201ENST00000410704 LRRC55Q6ZSA7 311 aa11□□□□□ -0.65
RN7SKP54-201ENST00000410704 USP37Q86T82 979 aa11□□□□□ -0.65
RN7SKP54-201ENST00000410704 LUZP1Q86V48 1076 aa11□□□□□ -0.65
RN7SKP54-201ENST00000410704 CREBRFQ8IUR6 639 aa11□□□□□ -0.65
RN7SKP54-201ENST00000410704 DHX40Q8IX18 779 aaKnown RBP11□□□□□ -0.65
RN7SKP54-201ENST00000410704 ZC3H3Q8IXZ2 948 aaKnown RBP11□□□□□ -0.65
RN7SKP54-201ENST00000410704 FAM186BQ8IYM0 893 aa11□□□□□ -0.65
RN7SKP54-201ENST00000410704 RDH13Q8NBN7 331 aa11□□□□□ -0.65
RN7SKP54-201ENST00000410704 RNF214Q8ND24 703 aa11□□□□□ -0.65
RN7SKP54-201ENST00000410704 ANKRD20A12PQ8NF67 263 aa11□□□□□ -0.65
RN7SKP54-201ENST00000410704 PGBD4Q96DM1 585 aa11□□□□□ -0.65
RN7SKP54-201ENST00000410704 EEF2KMTQ96G04 330 aa11□□□□□ -0.65
RN7SKP54-201ENST00000410704 ACAP3Q96P50 834 aa11□□□□□ -0.65
RN7SKP54-201ENST00000410704 MED15Q96RN5 788 aa11□□□□□ -0.65
RN7SKP54-201ENST00000410704 MKNK1Q9BUB5 465 aa11□□□□□ -0.65
RN7SKP54-201ENST00000410704 TRAIPQ9BWF2 469 aa11□□□□□ -0.65
RN7SKP54-201ENST00000410704 EIF2AQ9BY44 585 aaKnown RBP11□□□□□ -0.65
RN7SKP54-201ENST00000410704 HAPLN2Q9GZV7 340 aa11□□□□□ -0.65
RN7SKP54-201ENST00000410704 TSPYL2Q9H2G4 693 aaPredicted RBP11□□□□□ -0.65
RN7SKP54-201ENST00000410704 RPF1Q9H9Y2 349 aaKnown RBP11□□□□□ -0.65
RN7SKP54-201ENST00000410704 METTL14Q9HCE5 456 aaKnown RBP11□□□□□ -0.65
RN7SKP54-201ENST00000410704 RGS18Q9NS28 235 aa11□□□□□ -0.65
RN7SKP54-201ENST00000410704 TOPORSQ9NS56 1045 aaPredicted RBP11□□□□□ -0.65
RN7SKP54-201ENST00000410704 FANCLQ9NW38 375 aa11□□□□□ -0.65
RN7SKP54-201ENST00000410704 PCDHB2Q9Y5E7 798 aa11□□□□□ -0.65
RN7SKP54-201ENST00000410704 BRCA2P51587 3418 aa11□□□□□ -0.65
RN7SKP54-201ENST00000410704 A0A0U1RQF3 1178 aa10.99□□□□□ -0.65
RN7SKP54-201ENST00000410704 ABHD14A-ACY1A0A1B0GW23 586 aa10.99□□□□□ -0.65
RN7SKP54-201ENST00000410704 MAPK13O15264 365 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms