RNA–Protein interactions for RNA: ENST00000409782.5

LSM5-203, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 649 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-203ENST00000409782 IRF9Q00978 393 aa7.4□□□□□ -1.22
LSM5-203ENST00000409782 ODF1Q14990 250 aa7.4□□□□□ -1.22
LSM5-203ENST00000409782 HSP90AB4PQ58FF6 505 aa7.4□□□□□ -1.22
LSM5-203ENST00000409782 RRP12Q5JTH9 1297 aaKnown RBP7.4□□□□□ -1.22
LSM5-203ENST00000409782 BEND3Q5T5X7 828 aa7.4□□□□□ -1.22
LSM5-203ENST00000409782 B3GNT9Q6UX72 402 aa7.4□□□□□ -1.22
LSM5-203ENST00000409782 CHST15Q7LFX5 561 aaPredicted RBP7.4□□□□□ -1.22
LSM5-203ENST00000409782 NOSTRINQ8IVI9 506 aa7.4□□□□□ -1.22
LSM5-203ENST00000409782 KIAA1958Q8N8K9 716 aa7.4□□□□□ -1.22
LSM5-203ENST00000409782 TTLL11Q8NHH1 800 aa7.4□□□□□ -1.22
LSM5-203ENST00000409782 TIFAQ96CG3 184 aa7.4□□□□□ -1.22
LSM5-203ENST00000409782 RC3H2Q9HBD1 1191 aaKnown RBP7.4□□□□□ -1.22
LSM5-203ENST00000409782 ACSS2Q9NR19 701 aa7.4□□□□□ -1.22
LSM5-203ENST00000409782 MBNL3Q9NUK0 354 aaKnown RBP7.4□□□□□ -1.22
LSM5-203ENST00000409782 USP36Q9P275 1121 aaKnown RBP7.4□□□□□ -1.22
LSM5-203ENST00000409782 PTPRCP08575 1304 aa7.4□□□□□ -1.22
LSM5-203ENST00000409782 XDHP47989 1333 aa7.4□□□□□ -1.22
LSM5-203ENST00000409782 GRM8O00222 908 aa7.39□□□□□ -1.23
LSM5-203ENST00000409782 NPHS1O60500 1241 aa7.39□□□□□ -1.23
LSM5-203ENST00000409782 UFL1O94874 794 aa7.39□□□□□ -1.23
LSM5-203ENST00000409782 ZRANB2O95218 330 aaKnown RBP eCLIP7.39□□□□□ -1.23
LSM5-203ENST00000409782 IL33O95760 270 aa7.39□□□□□ -1.23
LSM5-203ENST00000409782 CYP17A1P05093 508 aa7.39□□□□□ -1.23
LSM5-203ENST00000409782 RNASE1P07998 156 aaKnown RBP7.39□□□□□ -1.23
LSM5-203ENST00000409782 IGHMBP2P38935 993 aaKnown RBP7.39□□□□□ -1.23
LSM5-203ENST00000409782 GJA9P57773 515 aa7.39□□□□□ -1.23
LSM5-203ENST00000409782 CXCL9Q07325 125 aa7.39□□□□□ -1.23
LSM5-203ENST00000409782 SPIRE1Q08AE8 756 aa7.39□□□□□ -1.23
LSM5-203ENST00000409782 GRM3Q14832 879 aa7.39□□□□□ -1.23
LSM5-203ENST00000409782 TNIP1Q15025 636 aa7.39□□□□□ -1.23
LSM5-203ENST00000409782 SAFBQ15424 915 aaKnown RBP eCLIP7.39□□□□□ -1.23
LSM5-203ENST00000409782 ALDH1L2Q3SY69 923 aa7.39□□□□□ -1.23
LSM5-203ENST00000409782 FIGNQ5HY92 759 aa7.39□□□□□ -1.23
LSM5-203ENST00000409782 CIAPIN1Q6FI81 312 aa7.39□□□□□ -1.23
LSM5-203ENST00000409782 FRMD7Q6ZUT3 714 aa7.39□□□□□ -1.23
LSM5-203ENST00000409782 CBLL1Q75N03 491 aa7.39□□□□□ -1.23
LSM5-203ENST00000409782 APBB1IPQ7Z5R6 666 aaPredicted RBP7.39□□□□□ -1.23
LSM5-203ENST00000409782 TRMT2AQ8IZ69 625 aaKnown RBP7.39□□□□□ -1.23
LSM5-203ENST00000409782 TBC1D16Q8TBP0 767 aa7.39□□□□□ -1.23
LSM5-203ENST00000409782 CCDC120Q96HB5 630 aa7.39□□□□□ -1.23
LSM5-203ENST00000409782 GREM2Q9H772 168 aa7.39□□□□□ -1.23
LSM5-203ENST00000409782 PRDM7Q9NQW5 492 aa7.39□□□□□ -1.23
LSM5-203ENST00000409782 TOPORSQ9NS56 1045 aaPredicted RBP7.39□□□□□ -1.23
LSM5-203ENST00000409782 PPARGC1AQ9UBK2 798 aaKnown RBP7.39□□□□□ -1.23
LSM5-203ENST00000409782 FBXL7Q9UJT9 491 aa7.39□□□□□ -1.23
LSM5-203ENST00000409782 INVSQ9Y283 1065 aa7.39□□□□□ -1.23
LSM5-203ENST00000409782 NOC2LQ9Y3T9 749 aaKnown RBP7.39□□□□□ -1.23
LSM5-203ENST00000409782 SPEF2Q9C093 1822 aa7.38□□□□□ -1.23
LSM5-203ENST00000409782 MED23Q9ULK4 1368 aa7.38□□□□□ -1.23
LSM5-203ENST00000409782 C7orf72A4D263 438 aa7.38□□□□□ -1.23
LSM5-203ENST00000409782 WASH4PA8MWX3 477 aa7.38□□□□□ -1.23
LSM5-203ENST00000409782 BIN1O00499 593 aa7.38□□□□□ -1.23
LSM5-203ENST00000409782 PPFIA4O75335 1185 aa7.38□□□□□ -1.23
LSM5-203ENST00000409782 HRGP04196 525 aa7.38□□□□□ -1.23
LSM5-203ENST00000409782 AMY2AP04746 511 aa7.38□□□□□ -1.23
LSM5-203ENST00000409782 CSF1RP07333 972 aa7.38□□□□□ -1.23
LSM5-203ENST00000409782 AMY2BP19961 511 aa7.38□□□□□ -1.23
LSM5-203ENST00000409782 CD40P25942 277 aa7.38□□□□□ -1.23
LSM5-203ENST00000409782 GALEQ14376 348 aa7.38□□□□□ -1.23
LSM5-203ENST00000409782 ARHGAP29Q52LW3 1261 aa7.38□□□□□ -1.23
LSM5-203ENST00000409782 SRGAP1Q7Z6B7 1085 aa7.38□□□□□ -1.23
LSM5-203ENST00000409782 DLG3Q92796 817 aa7.38□□□□□ -1.23
LSM5-203ENST00000409782 E2F7Q96AV8 911 aa7.38□□□□□ -1.23
LSM5-203ENST00000409782 TEKT5Q96M29 485 aa7.38□□□□□ -1.23
LSM5-203ENST00000409782 ELF4Q99607 663 aaPredicted RBP7.38□□□□□ -1.23
LSM5-203ENST00000409782 EPB41L1Q9H4G0 881 aa7.38□□□□□ -1.23
LSM5-203ENST00000409782 PCIF1Q9H4Z3 704 aa7.38□□□□□ -1.23
LSM5-203ENST00000409782 ZMAT4Q9H898 229 aa7.38□□□□□ -1.23
LSM5-203ENST00000409782 PRDM16Q9HAZ2 1276 aa7.38□□□□□ -1.23
LSM5-203ENST00000409782 ADARB2Q9NS39 739 aaKnown RBP7.38□□□□□ -1.23
LSM5-203ENST00000409782 CCM2LQ9NUG4 571 aaPredicted RBP7.38□□□□□ -1.23
LSM5-203ENST00000409782 AP5S1Q9NUS5 200 aa7.38□□□□□ -1.23
LSM5-203ENST00000409782 CLDND1Q9NY35 253 aa7.38□□□□□ -1.23
LSM5-203ENST00000409782 GPRC5DQ9NZD1 345 aa7.38□□□□□ -1.23
LSM5-203ENST00000409782 POLLQ9UGP5 575 aa7.38□□□□□ -1.23
LSM5-203ENST00000409782 ADAMTS6Q9UKP5 1117 aa7.38□□□□□ -1.23
LSM5-203ENST00000409782 ZNF281Q9Y2X9 895 aa7.38□□□□□ -1.23
LSM5-203ENST00000409782 B3GALT1Q9Y5Z6 326 aa7.38□□□□□ -1.23
LSM5-203ENST00000409782 X6R8D5 127 aa7.38□□□□□ -1.23
LSM5-203ENST00000409782 PSME4Q14997 1843 aa7.38□□□□□ -1.23
LSM5-203ENST00000409782 UTYO14607 1347 aa7.37□□□□□ -1.23
LSM5-203ENST00000409782 FRMPD2Q68DX3 1309 aaPredicted RBP7.37□□□□□ -1.23
LSM5-203ENST00000409782 PASKQ96RG2 1323 aa7.37□□□□□ -1.23
LSM5-203ENST00000409782 SSU72P8A0A1W2PR75 194 aa7.37□□□□□ -1.23
LSM5-203ENST00000409782 ANKRD18BA2A2Z9 1011 aa7.37□□□□□ -1.23
LSM5-203ENST00000409782 YDJCA8MPS7 323 aa7.37□□□□□ -1.23
LSM5-203ENST00000409782 DVL2O14641 736 aa7.37□□□□□ -1.23
LSM5-203ENST00000409782 XPOTO43592 962 aaKnown RBP7.37□□□□□ -1.23
LSM5-203ENST00000409782 ECE2O60344 883 aa7.37□□□□□ -1.23
LSM5-203ENST00000409782 HIP1RO75146 1068 aa7.37□□□□□ -1.23
LSM5-203ENST00000409782 RAD17O75943 681 aa7.37□□□□□ -1.23
LSM5-203ENST00000409782 FOSP01100 380 aaPredicted RBP7.37□□□□□ -1.23
LSM5-203ENST00000409782 ESR1P03372 595 aa7.37□□□□□ -1.23
LSM5-203ENST00000409782 RPS12P25398 132 aaKnown RBP7.37□□□□□ -1.23
LSM5-203ENST00000409782 BCL6P41182 706 aa7.37□□□□□ -1.23
LSM5-203ENST00000409782 GMPSP49915 693 aaPredicted RBP7.37□□□□□ -1.23
LSM5-203ENST00000409782 ADKP55263 362 aaKnown RBP7.37□□□□□ -1.23
LSM5-203ENST00000409782 JAM2P57087 298 aa7.37□□□□□ -1.23
LSM5-203ENST00000409782 HTRA3P83110 453 aa7.37□□□□□ -1.23
LSM5-203ENST00000409782 EGR3Q06889 387 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms