RNA–Protein interactions for RNA: ENST00000409777.5

CUL3-204, Transcript of cullin 3, humanhuman

TSL 1 (best) BASIC

Gene CUL3, Length 3,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-204ENST00000409777 AGAP11Q8TF27 550 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 ZNF483Q8TF39 744 aaPredicted RBP3.39□□□□□ -1.87
CUL3-204ENST00000409777 GTF3C2Q8WUA4 911 aaPredicted RBP3.39□□□□□ -1.87
CUL3-204ENST00000409777 CKAP2Q8WWK9 683 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 UTP4Q969X6 686 aaKnown RBP3.39□□□□□ -1.87
CUL3-204ENST00000409777 LENG9Q96B70 501 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 STAMBPL1Q96FJ0 436 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 SERPINB12Q96P63 405 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 CRAMP1Q96RY5 1269 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 FIZ1Q96SL8 496 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 NAP1L3Q99457 506 aaPredicted RBP3.39□□□□□ -1.87
CUL3-204ENST00000409777 RAB34Q9BZG1 259 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 LRMDAQ9H2I8 198 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 METTL14Q9HCE5 456 aaKnown RBP3.39□□□□□ -1.87
CUL3-204ENST00000409777 CYLDQ9NQC7 956 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 TMEM260Q9NX78 707 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 PARP2Q9UGN5 583 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 DCTN4Q9UJW0 460 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 HDAC9Q9UKV0 1011 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 PPP1R9AQ9ULJ8 1098 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 COG5Q9UP83 839 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 PCDHGB7Q9Y5F8 929 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 MRPL42Q9Y6G3 142 aaKnown RBP3.39□□□□□ -1.87
CUL3-204ENST00000409777 DOCK5Q9H7D0 1870 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 ANKRD31Q8N7Z5 1873 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 PODXLO00592 558 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 TGFB1I1O43294 461 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 CEP104O60308 925 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 ECE2O60344 883 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 ANP32DO95626 131 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 BAG3O95817 575 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 FESP07332 822 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 SPATA31C1P0DKV0 1188 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 SLC9A1P19634 815 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 MUTP22033 750 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 PAX7P23759 505 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 HIBADHP31937 336 aaKnown RBP3.39□□□□□ -1.87
CUL3-204ENST00000409777 HPDP32754 393 aaPredicted RBP3.39□□□□□ -1.87
CUL3-204ENST00000409777 CIITAP33076 1130 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 SOX5P35711 763 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 RPL21P46778 160 aaKnown RBP3.39□□□□□ -1.87
CUL3-204ENST00000409777 CDK8P49336 464 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 MMP16P51512 607 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 ALDH5A1P51649 535 aaPredicted RBP3.39□□□□□ -1.87
CUL3-204ENST00000409777 ADCY7P51828 1080 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 CASP5P51878 434 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 GALCP54803 685 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 PTPN5P54829 565 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 COPS2P61201 443 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 GSTO1P78417 241 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 DR1Q01658 176 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 MGAT5Q09328 741 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 LBRQ14739 615 aaKnown RBP3.39□□□□□ -1.87
CUL3-204ENST00000409777 LRRC41Q15345 812 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 KNOP1Q1ED39 458 aaKnown RBP3.39□□□□□ -1.87
CUL3-204ENST00000409777 ERFEQ4G0M1 354 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 ZC3H12AQ5D1E8 599 aaKnown RBP3.39□□□□□ -1.87
CUL3-204ENST00000409777 UBAP2Q5T6F2 1119 aaKnown RBP3.39□□□□□ -1.87
CUL3-204ENST00000409777 KRT79Q5XKE5 535 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 TTC27Q6P3X3 843 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 CCDC65Q8IXS2 484 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 TEX9Q8N6V9 391 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 CCDC63Q8NA47 563 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 MDM1Q8TC05 714 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 SNX29Q8TEQ0 813 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 NSMCE1Q8WV22 266 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 ZFAND2BQ8WV99 257 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 PSPC1Q8WXF1 523 aaKnown RBP3.39□□□□□ -1.87
CUL3-204ENST00000409777 ALG3Q92685 438 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 DYNLL2Q96FJ2 89 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 EEF2KMTQ96G04 330 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 PIGSQ96S52 555 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 STK33Q9BYT3 514 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 TRIM6Q9C030 488 aaPredicted RBP3.39□□□□□ -1.87
CUL3-204ENST00000409777 STMN4Q9H169 189 aaPredicted RBP3.39□□□□□ -1.87
CUL3-204ENST00000409777 DHX36Q9H2U1 1008 aaKnown RBP3.39□□□□□ -1.87
CUL3-204ENST00000409777 LRRC19Q9H756 370 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 RXFP1Q9HBX9 757 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 POLD4Q9HCU8 107 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 ABCF3Q9NUQ8 709 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 TYW1Q9NV66 732 aaKnown RBP3.39□□□□□ -1.87
CUL3-204ENST00000409777 NOP53Q9NZM5 478 aaKnown RBP3.39□□□□□ -1.87
CUL3-204ENST00000409777 ADAM22Q9P0K1 906 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 WHRNQ9P202 907 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 ANKIB1Q9P2G1 1089 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 FKBPLQ9UIM3 349 aa3.39□□□□□ -1.87
CUL3-204ENST00000409777 TSR3Q9UJK0 312 aaKnown RBP3.39□□□□□ -1.87
CUL3-204ENST00000409777 UTP11Q9Y3A2 253 aaKnown RBP3.39□□□□□ -1.87
CUL3-204ENST00000409777 USP15Q9Y4E8 981 aaPredicted RBP3.39□□□□□ -1.87
CUL3-204ENST00000409777 COL2A1P02458 1487 aaPredicted RBP3.39□□□□□ -1.87
CUL3-204ENST00000409777 SYNGAP1Q96PV0 1343 aa3.38□□□□□ -1.87
CUL3-204ENST00000409777 PNMA6FA0A0J9YX94 578 aa3.38□□□□□ -1.87
CUL3-204ENST00000409777 ZBBXA8MT70 800 aa3.38□□□□□ -1.87
CUL3-204ENST00000409777 PDLIM1O00151 329 aa3.38□□□□□ -1.87
CUL3-204ENST00000409777 TRAF5O00463 557 aa3.38□□□□□ -1.87
CUL3-204ENST00000409777 MAPK13O15264 365 aa3.38□□□□□ -1.87
CUL3-204ENST00000409777 FAM155BO75949 473 aa3.38□□□□□ -1.87
CUL3-204ENST00000409777 AKAP3O75969 853 aa3.38□□□□□ -1.87
CUL3-204ENST00000409777 DXOO77932 396 aaKnown RBP3.38□□□□□ -1.87
CUL3-204ENST00000409777 UBOX5O94941 541 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms