RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 DAAM2Q86T65 1068 aa21.73■■□□□ 1.07
USP39-204ENST00000409766 NT5DC3Q86UY8 548 aa21.73■■□□□ 1.07
USP39-204ENST00000409766 THAP2Q9H0W7 228 aa21.73■■□□□ 1.07
USP39-204ENST00000409766 KIAA1586Q9HCI6 787 aa21.73■■□□□ 1.07
USP39-204ENST00000409766 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.73■■□□□ 1.079e-9■■■■■ 111.8
USP39-204ENST00000409766 NRBP2Q9NSY0 501 aa21.73■■□□□ 1.07
USP39-204ENST00000409766 NOCTQ9UK39 431 aaKnown RBP21.73■■□□□ 1.07
USP39-204ENST00000409766 GGPS1O95749 300 aa21.73■■□□□ 1.07
USP39-204ENST00000409766 PIGRP01833 764 aa21.73■■□□□ 1.07
USP39-204ENST00000409766 DLATP10515 647 aaKnown RBP21.73■■□□□ 1.07
USP39-204ENST00000409766 OAS2P29728 719 aaKnown RBP21.73■■□□□ 1.07
USP39-204ENST00000409766 LY6KQ17RY6 165 aa21.73■■□□□ 1.07
USP39-204ENST00000409766 DPY19L2Q6NUT2 758 aa21.73■■□□□ 1.07
USP39-204ENST00000409766 C8orf74Q6P047 294 aa21.73■■□□□ 1.07
USP39-204ENST00000409766 EEPD1Q7L9B9 569 aa21.73■■□□□ 1.07
USP39-204ENST00000409766 USP38Q8NB14 1042 aa21.73■■□□□ 1.07
USP39-204ENST00000409766 EPS8L1Q8TE68 723 aa21.73■■□□□ 1.07
USP39-204ENST00000409766 SEPT1Q8WYJ6 367 aa21.73■■□□□ 1.07
USP39-204ENST00000409766 OPTNQ96CV9 577 aa21.73■■□□□ 1.07
USP39-204ENST00000409766 ARHGEF26Q96DR7 871 aa21.73■■□□□ 1.07
USP39-204ENST00000409766 ISCUQ9H1K1 167 aa21.73■■□□□ 1.07
USP39-204ENST00000409766 STIM2Q9P246 746 aa21.73■■□□□ 1.07
USP39-204ENST00000409766 TULP1O00294 542 aaPredicted RBP21.72■■□□□ 1.07
USP39-204ENST00000409766 SGPL1O95470 568 aa21.72■■□□□ 1.07
USP39-204ENST00000409766 PGK2P07205 417 aa21.72■■□□□ 1.07
USP39-204ENST00000409766 EPHX2P34913 555 aa21.72■■□□□ 1.07
USP39-204ENST00000409766 TCF7P36402 384 aaPredicted RBP21.72■■□□□ 1.07
USP39-204ENST00000409766 USP8P40818 1118 aa21.72■■□□□ 1.07
USP39-204ENST00000409766 CLDN10P78369 228 aa21.72■■□□□ 1.07
USP39-204ENST00000409766 MRPS25P82663 173 aaKnown RBP21.72■■□□□ 1.07
USP39-204ENST00000409766 SLC7A5Q01650 507 aa21.72■■□□□ 1.07
USP39-204ENST00000409766 TERF2Q15554 542 aa21.72■■□□□ 1.07
USP39-204ENST00000409766 FAM160B1Q5W0V3 765 aa21.72■■□□□ 1.07
USP39-204ENST00000409766 RPUSD2Q8IZ73 545 aaKnown RBP21.72■■□□□ 1.07
USP39-204ENST00000409766 DEPTORQ8TB45 409 aa21.72■■□□□ 1.07
USP39-204ENST00000409766 NT5C1BQ96P26 610 aa21.72■■□□□ 1.07
USP39-204ENST00000409766 PDE11AQ9HCR9 933 aa21.72■■□□□ 1.07
USP39-204ENST00000409766 TMEM59LQ9UK28 342 aa21.72■■□□□ 1.07
USP39-204ENST00000409766 DNAJC25-GNG10A0A024R161 153 aa21.72■■□□□ 1.07
USP39-204ENST00000409766 LRRIQ4A6NIV6 560 aa21.72■■□□□ 1.07
USP39-204ENST00000409766 BUB1BO60566 1050 aaPredicted RBP21.72■■□□□ 1.07
USP39-204ENST00000409766 COPB2P35606 906 aa21.72■■□□□ 1.07
USP39-204ENST00000409766 PTPROQ16827 1216 aa21.72■■□□□ 1.07
USP39-204ENST00000409766 C15orf39Q6ZRI6 1047 aa21.72■■□□□ 1.07
USP39-204ENST00000409766 NOP9Q86U38 636 aaKnown RBP21.72■■□□□ 1.07
USP39-204ENST00000409766 METTL13Q8N6R0 699 aa21.72■■□□□ 1.07
USP39-204ENST00000409766 ACTRT1Q8TDG2 376 aa21.72■■□□□ 1.07
USP39-204ENST00000409766 PSPC1Q8WXF1 523 aaKnown RBP21.72■■□□□ 1.07
USP39-204ENST00000409766 HES6Q96HZ4 224 aa21.72■■□□□ 1.07
USP39-204ENST00000409766 HINFPQ9BQA5 517 aa21.72■■□□□ 1.07
USP39-204ENST00000409766 VIPAS39Q9H9C1 493 aa21.72■■□□□ 1.07
USP39-204ENST00000409766 H3BQF6 201 aa21.71■■□□□ 1.07
USP39-204ENST00000409766 K7ERI5 159 aa21.71■■□□□ 1.07
USP39-204ENST00000409766 KIAA0391O15091 583 aaKnown RBP21.71■■□□□ 1.07
USP39-204ENST00000409766 CYP26A1O43174 497 aa21.71■■□□□ 1.07
USP39-204ENST00000409766 ARIH2O95376 493 aa21.71■■□□□ 1.07
USP39-204ENST00000409766 CHRNB2P17787 502 aa21.71■■□□□ 1.07
USP39-204ENST00000409766 GPAT2Q6NUI2 795 aa21.71■■□□□ 1.07
USP39-204ENST00000409766 FASTKD5Q7L8L6 764 aaKnown RBP21.71■■□□□ 1.07
USP39-204ENST00000409766 GSPT2Q8IYD1 628 aaKnown RBP21.71■■□□□ 1.07
USP39-204ENST00000409766 AENQ8WTP8 325 aaKnown RBP21.71■■□□□ 1.07
USP39-204ENST00000409766 ZNF516Q92618 1163 aa21.71■■□□□ 1.07
USP39-204ENST00000409766 MPHOSPH6Q99547 160 aaKnown RBP21.71■■□□□ 1.07
USP39-204ENST00000409766 HAPLN2Q9GZV7 340 aa21.71■■□□□ 1.07
USP39-204ENST00000409766 FTLP02792 175 aaPredicted RBP21.7■■□□□ 1.06
USP39-204ENST00000409766 RNASE9P60153 205 aaKnown RBP21.7■■□□□ 1.06
USP39-204ENST00000409766 PSMD6Q15008 389 aa21.7■■□□□ 1.06
USP39-204ENST00000409766 SLC47A2Q86VL8 602 aa21.7■■□□□ 1.06
USP39-204ENST00000409766 PCDHB18PQ96TA0 734 aa21.7■■□□□ 1.06
USP39-204ENST00000409766 SELENOOQ9BVL4 669 aa21.7■■□□□ 1.06
USP39-204ENST00000409766 ZCCHC17Q9NP64 241 aaKnown RBP21.7■■□□□ 1.06
USP39-204ENST00000409766 AGO2Q9UKV8 859 aaKnown RBP21.7■■□□□ 1.06
USP39-204ENST00000409766 ZNFX1Q9P2E3 1918 aaKnown RBP21.7■■□□□ 1.06
USP39-204ENST00000409766 MAFO75444 373 aaPredicted RBP21.7■■□□□ 1.06
USP39-204ENST00000409766 OSBPP22059 807 aa21.7■■□□□ 1.06
USP39-204ENST00000409766 HADHBP55084 474 aaKnown RBP21.7■■□□□ 1.06
USP39-204ENST00000409766 GPS2Q13227 327 aa21.7■■□□□ 1.06
USP39-204ENST00000409766 KCNV1Q6PIU1 500 aa21.7■■□□□ 1.06
USP39-204ENST00000409766 ACP6Q9NPH0 428 aa21.7■■□□□ 1.06
USP39-204ENST00000409766 AMFRQ9UKV5 643 aa21.7■■□□□ 1.06
USP39-204ENST00000409766 COG5Q9UP83 839 aa21.7■■□□□ 1.06
USP39-204ENST00000409766 POLR3GO15318 223 aaPredicted RBP21.69■■□□□ 1.06
USP39-204ENST00000409766 CEP104O60308 925 aa21.69■■□□□ 1.06
USP39-204ENST00000409766 RTN2O75298 545 aa21.69■■□□□ 1.06
USP39-204ENST00000409766 GZMAP12544 262 aa21.69■■□□□ 1.06
USP39-204ENST00000409766 TNFRSF8P28908 595 aa21.69■■□□□ 1.06
USP39-204ENST00000409766 NLRP11P59045 1033 aaKnown RBP21.69■■□□□ 1.06
USP39-204ENST00000409766 TCEAL1Q15170 157 aa21.69■■□□□ 1.06
USP39-204ENST00000409766 SLFN12LQ6IEE8 588 aa21.69■■□□□ 1.06
USP39-204ENST00000409766 CRELD2Q6UXH1 353 aaPredicted RBP21.69■■□□□ 1.06
USP39-204ENST00000409766 RHOT2Q8IXI1 618 aa21.69■■□□□ 1.06
USP39-204ENST00000409766 TATDN2Q93075 761 aa21.69■■□□□ 1.06
USP39-204ENST00000409766 MMP19Q99542 508 aa21.69■■□□□ 1.06
USP39-204ENST00000409766 TMEM134Q9H6X4 195 aa21.69■■□□□ 1.06
USP39-204ENST00000409766 MCM3APO60318 1980 aa21.69■■□□□ 1.06
USP39-204ENST00000409766 ZC3H11AO75152 810 aaKnown RBP eCLIP21.68■■□□□ 1.06
USP39-204ENST00000409766 WNT7BP56706 349 aa21.68■■□□□ 1.06
USP39-204ENST00000409766 GCNT1Q02742 428 aa21.68■■□□□ 1.06
USP39-204ENST00000409766 CAPSQ13938 189 aa21.68■■□□□ 1.06
USP39-204ENST00000409766 KCTD2Q14681 263 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms