RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 EHBP1Q8NDI1 1231 aa15.3■□□□□ 0.04
LIMS2-206ENST00000409754 SAAL1Q96ER3 474 aa15.3■□□□□ 0.04
LIMS2-206ENST00000409754 KIAA1586Q9HCI6 787 aa15.3■□□□□ 0.04
LIMS2-206ENST00000409754 ERAP1Q9NZ08 941 aa15.3■□□□□ 0.04
LIMS2-206ENST00000409754 PCDHA13Q9Y5I0 950 aa15.3■□□□□ 0.04
LIMS2-206ENST00000409754 SIP14410 1827 aa15.3■□□□□ 0.04
LIMS2-206ENST00000409754 ABL1P00519 1130 aa15.29■□□□□ 0.04
LIMS2-206ENST00000409754 ANXA13P27216 316 aa15.29■□□□□ 0.04
LIMS2-206ENST00000409754 ADCYAP1R1P41586 468 aa15.29■□□□□ 0.04
LIMS2-206ENST00000409754 PRKCIP41743 596 aa15.29■□□□□ 0.04
LIMS2-206ENST00000409754 CYP27A1Q02318 531 aa15.29■□□□□ 0.04
LIMS2-206ENST00000409754 MXD4Q14582 209 aaPredicted RBP15.29■□□□□ 0.04
LIMS2-206ENST00000409754 EPC2Q52LR7 807 aa15.29■□□□□ 0.04
LIMS2-206ENST00000409754 CCDC122Q5T0U0 273 aa15.29■□□□□ 0.04
LIMS2-206ENST00000409754 SLFN12LQ6IEE8 588 aa15.29■□□□□ 0.04
LIMS2-206ENST00000409754 IRF2BP2Q7Z5L9 587 aa15.29■□□□□ 0.04
LIMS2-206ENST00000409754 FMNL3Q8IVF7 1028 aa15.29■□□□□ 0.04
LIMS2-206ENST00000409754 LMO3Q8TAP4 145 aa15.29■□□□□ 0.04
LIMS2-206ENST00000409754 STK33Q9BYT3 514 aa15.29■□□□□ 0.04
LIMS2-206ENST00000409754 IFIH1Q9BYX4 1025 aaKnown RBP15.29■□□□□ 0.04
LIMS2-206ENST00000409754 RNF208Q9H0X6 261 aa15.29■□□□□ 0.04
LIMS2-206ENST00000409754 ABHD16BQ9H3Z7 469 aa15.29■□□□□ 0.04
LIMS2-206ENST00000409754 APEX2Q9UBZ4 518 aa15.29■□□□□ 0.04
LIMS2-206ENST00000409754 AJAP1Q9UKB5 411 aaPredicted RBP15.29■□□□□ 0.04
LIMS2-206ENST00000409754 ZHX1Q9UKY1 873 aaPredicted RBP15.29■□□□□ 0.04
LIMS2-206ENST00000409754 TRPC6Q9Y210 931 aa15.29■□□□□ 0.04
LIMS2-206ENST00000409754 USP20Q9Y2K6 914 aa15.29■□□□□ 0.04
LIMS2-206ENST00000409754 SEPT4O43236 478 aa15.28■□□□□ 0.04
LIMS2-206ENST00000409754 EXTL3O43909 919 aa15.28■□□□□ 0.04
LIMS2-206ENST00000409754 URI1O94763 535 aaPredicted RBP15.28■□□□□ 0.04
LIMS2-206ENST00000409754 SLU7O95391 586 aaKnown RBP15.28■□□□□ 0.04
LIMS2-206ENST00000409754 LGALS2P05162 132 aa15.28■□□□□ 0.04
LIMS2-206ENST00000409754 GTF2H1P32780 548 aa15.28■□□□□ 0.04
LIMS2-206ENST00000409754 STAT1P42224 750 aa15.28■□□□□ 0.04
LIMS2-206ENST00000409754 EFNA5P52803 228 aa15.28■□□□□ 0.04
LIMS2-206ENST00000409754 CYP24A1Q07973 514 aa15.28■□□□□ 0.04
LIMS2-206ENST00000409754 KIF5AQ12840 1032 aa15.28■□□□□ 0.04
LIMS2-206ENST00000409754 MKRN4PQ13434 485 aaPredicted RBP15.28■□□□□ 0.04
LIMS2-206ENST00000409754 DRP2Q13474 957 aa15.28■□□□□ 0.04
LIMS2-206ENST00000409754 ZNF484Q5JVG2 852 aa15.28■□□□□ 0.04
LIMS2-206ENST00000409754 CDCA2Q69YH5 1023 aaPredicted RBP15.28■□□□□ 0.04
LIMS2-206ENST00000409754 SLC35F6Q8N357 371 aa15.28■□□□□ 0.04
LIMS2-206ENST00000409754 PARD3BQ8TEW8 1205 aa15.28■□□□□ 0.04
LIMS2-206ENST00000409754 PRPF31Q8WWY3 499 aaKnown RBP15.28■□□□□ 0.04
LIMS2-206ENST00000409754 PSPC1Q8WXF1 523 aaKnown RBP15.28■□□□□ 0.04
LIMS2-206ENST00000409754 VTI1AQ96AJ9 217 aa15.28■□□□□ 0.04
LIMS2-206ENST00000409754 DEFB118Q96PH6 123 aa15.28■□□□□ 0.04
LIMS2-206ENST00000409754 LACRTQ9GZZ8 138 aa15.28■□□□□ 0.04
LIMS2-206ENST00000409754 TMEM117Q9H0C3 514 aa15.28■□□□□ 0.04
LIMS2-206ENST00000409754 HMX1Q9NP08 348 aaPredicted RBP15.28■□□□□ 0.04
LIMS2-206ENST00000409754 GUCA1BQ9UMX6 200 aa15.28■□□□□ 0.04
LIMS2-206ENST00000409754 RCCD1A6NED2 376 aa15.28■□□□□ 0.04
LIMS2-206ENST00000409754 GJB1P08034 283 aa15.28■□□□□ 0.04
LIMS2-206ENST00000409754 FERP16591 822 aa15.28■□□□□ 0.04
LIMS2-206ENST00000409754 GCLMP48507 274 aa15.28■□□□□ 0.04
LIMS2-206ENST00000409754 MXI1P50539 228 aa15.28■□□□□ 0.04
LIMS2-206ENST00000409754 SLC18A3Q16572 532 aa15.28■□□□□ 0.04
LIMS2-206ENST00000409754 DUSP28Q4G0W2 176 aa15.28■□□□□ 0.04
LIMS2-206ENST00000409754 IQSEC1Q6DN90 963 aa15.28■□□□□ 0.04
LIMS2-206ENST00000409754 GJB7Q6PEY0 223 aa15.28■□□□□ 0.04
LIMS2-206ENST00000409754 GPIHBP1Q8IV16 184 aa15.28■□□□□ 0.04
LIMS2-206ENST00000409754 AFG1LQ8WV93 481 aa15.28■□□□□ 0.04
LIMS2-206ENST00000409754 CRISPLD2Q9H0B8 497 aa15.28■□□□□ 0.04
LIMS2-206ENST00000409754 SUGCTQ9HAC7 445 aa15.28■□□□□ 0.04
LIMS2-206ENST00000409754 LUC7LQ9NQ29 371 aaKnown RBP15.28■□□□□ 0.04
LIMS2-206ENST00000409754 TRIM10Q9UDY6 481 aa15.28■□□□□ 0.04
LIMS2-206ENST00000409754 DNAJC12Q9UKB3 198 aa15.28■□□□□ 0.04
LIMS2-206ENST00000409754 MYADML2A6NDP7 307 aa15.27■□□□□ 0.03
LIMS2-206ENST00000409754 ZNF233A6NK53 670 aa15.27■□□□□ 0.03
LIMS2-206ENST00000409754 LRRIQ3A6PVS8 624 aaPredicted RBP15.27■□□□□ 0.03
LIMS2-206ENST00000409754 F8VZ95 297 aa15.27■□□□□ 0.03
LIMS2-206ENST00000409754 PJA2O43164 708 aa15.27■□□□□ 0.03
LIMS2-206ENST00000409754 PPFIA4O75335 1185 aa15.27■□□□□ 0.03
LIMS2-206ENST00000409754 HOXD8P13378 290 aaPredicted RBP15.27■□□□□ 0.03
LIMS2-206ENST00000409754 SMPD1P17405 629 aa15.27■□□□□ 0.03
LIMS2-206ENST00000409754 MAGEA1P43355 309 aa15.27■□□□□ 0.03
LIMS2-206ENST00000409754 ARID5AQ03989 594 aa15.27■□□□□ 0.03
LIMS2-206ENST00000409754 GFPT1Q06210 699 aaPredicted RBP15.27■□□□□ 0.03
LIMS2-206ENST00000409754 LAMTOR4Q0VGL1 99 aa15.27■□□□□ 0.03
LIMS2-206ENST00000409754 KRT39Q6A163 491 aa15.27■□□□□ 0.03
LIMS2-206ENST00000409754 ZPBP2Q6X784 338 aa15.27■□□□□ 0.03
LIMS2-206ENST00000409754 U2AF1L4Q8WU68 220 aaKnown RBP15.27■□□□□ 0.03
LIMS2-206ENST00000409754 FAM213AQ9BRX8 229 aa15.27■□□□□ 0.03
LIMS2-206ENST00000409754 C2orf40Q9H1Z8 148 aa15.27■□□□□ 0.03
LIMS2-206ENST00000409754 TMEM8AQ9HCN3 771 aa15.27■□□□□ 0.03
LIMS2-206ENST00000409754 DDX20Q9UHI6 824 aaKnown RBP15.27■□□□□ 0.03
LIMS2-206ENST00000409754 GNEQ9Y223 722 aaKnown RBP15.27■□□□□ 0.03
LIMS2-206ENST00000409754 ALPK3Q96L96 1907 aa15.27■□□□□ 0.03
LIMS2-206ENST00000409754 CTAGE9A4FU28 777 aa15.26■□□□□ 0.03
LIMS2-206ENST00000409754 ASAP2O43150 1006 aa15.26■□□□□ 0.03
LIMS2-206ENST00000409754 ADAMTS4O75173 837 aa15.26■□□□□ 0.03
LIMS2-206ENST00000409754 LDHAP00338 332 aaKnown RBP15.26■□□□□ 0.03
LIMS2-206ENST00000409754 EN2P19622 333 aaPredicted RBP15.26■□□□□ 0.03
LIMS2-206ENST00000409754 SOX5P35711 763 aa15.26■□□□□ 0.03
LIMS2-206ENST00000409754 GJA8P48165 433 aa15.26■□□□□ 0.03
LIMS2-206ENST00000409754 PTK2Q05397 1052 aa15.26■□□□□ 0.03
LIMS2-206ENST00000409754 TUBB2AQ13885 445 aa15.26■□□□□ 0.03
LIMS2-206ENST00000409754 TFDP1Q14186 410 aa15.26■□□□□ 0.03
LIMS2-206ENST00000409754 DRAP1Q14919 205 aaPredicted RBP15.26■□□□□ 0.03
LIMS2-206ENST00000409754 ZBTB8OSQ8IWT0 167 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms