RNA–Protein interactions for RNA: ENST00000409406.1

RBM4-205, Transcript of RNA binding motif protein 4, human

APPRIS P1 TSL 2 BASIC

Gene RBM4, Length 2,321 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM4-205	ENST00000409406	TRIM6	Q9C030	488 aa	Predicted RBP	13.91	□□□□□ -0.18
RBM4-205	ENST00000409406	EPN3	Q9H201	632 aa		13.91	□□□□□ -0.18
RBM4-205	ENST00000409406	METTL14	Q9HCE5	456 aa	Known RBP	13.91	□□□□□ -0.18
RBM4-205	ENST00000409406	DDX20	Q9UHI6	824 aa	Known RBP	13.91	□□□□□ -0.18
RBM4-205	ENST00000409406	TBX20	Q9UMR3	447 aa		13.91	□□□□□ -0.18
RBM4-205	ENST00000409406	EPN1	Q9Y6I3	576 aa	Predicted RBP	13.91	□□□□□ -0.18
RBM4-205	ENST00000409406	MANSC4	A6NHS7	340 aa	Predicted RBP	13.9	□□□□□ -0.18
RBM4-205	ENST00000409406	XRCC5	P13010	732 aa	Known RBP	13.9	□□□□□ -0.18
RBM4-205	ENST00000409406	LSP1	P33241	339 aa		13.9	□□□□□ -0.18
RBM4-205	ENST00000409406	PSMC2	P35998	433 aa	Known RBP	13.9	□□□□□ -0.18
RBM4-205	ENST00000409406	ATP1A2	P50993	1020 aa		13.9	□□□□□ -0.18
RBM4-205	ENST00000409406	CLNS1A	P54105	237 aa	Known RBP	13.9	□□□□□ -0.18
RBM4-205	ENST00000409406	APBA1	Q02410	837 aa		13.9	□□□□□ -0.18
RBM4-205	ENST00000409406	SNCB	Q16143	134 aa		13.9	□□□□□ -0.18
RBM4-205	ENST00000409406	FAM160B1	Q5W0V3	765 aa		13.9	□□□□□ -0.18
RBM4-205	ENST00000409406	ALS2CL	Q60I27	953 aa		13.9	□□□□□ -0.18
RBM4-205	ENST00000409406	DPY19L2P1	Q6NXN4	242 aa		13.9	□□□□□ -0.18
RBM4-205	ENST00000409406	PLEKHH3	Q7Z736	793 aa		13.9	□□□□□ -0.18
RBM4-205	ENST00000409406	FAM186B	Q8IYM0	893 aa		13.9	□□□□□ -0.18
RBM4-205	ENST00000409406	RNF217	Q8TC41	542 aa		13.9	□□□□□ -0.18
RBM4-205	ENST00000409406	TMEM143	Q96AN5	459 aa		13.9	□□□□□ -0.18
RBM4-205	ENST00000409406	MAML3	Q96JK9	1138 aa		13.9	□□□□□ -0.18
RBM4-205	ENST00000409406	SPATA33	Q96N06	139 aa		13.9	□□□□□ -0.18
RBM4-205	ENST00000409406	CBWD1	Q9BRT8	395 aa		13.9	□□□□□ -0.18
RBM4-205	ENST00000409406	POLR3F	Q9H1D9	316 aa	Predicted RBP	13.9	□□□□□ -0.18
RBM4-205	ENST00000409406	KMT5A	Q9NQR1	393 aa		13.9	□□□□□ -0.18
RBM4-205	ENST00000409406	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	13.9	□□□□□ -0.18
RBM4-205	ENST00000409406	RBM47	A0AV96	593 aa	Known RBP	13.9	□□□□□ -0.18
RBM4-205	ENST00000409406	ZNF185	O15231	689 aa		13.9	□□□□□ -0.18
RBM4-205	ENST00000409406	HSF2BP	O75031	334 aa		13.9	□□□□□ -0.18
RBM4-205	ENST00000409406	RTN2	O75298	545 aa		13.9	□□□□□ -0.18
RBM4-205	ENST00000409406	SLC10A3	P09131	477 aa		13.9	□□□□□ -0.18
RBM4-205	ENST00000409406	MAPK4	P31152	587 aa		13.9	□□□□□ -0.18
RBM4-205	ENST00000409406	CDR1	P51861	262 aa		13.9	□□□□□ -0.18
RBM4-205	ENST00000409406	POLG	P54098	1239 aa	Predicted RBP	13.9	□□□□□ -0.18
RBM4-205	ENST00000409406	ARHGAP1	Q07960	439 aa		13.9	□□□□□ -0.18
RBM4-205	ENST00000409406	MYBPC2	Q14324	1141 aa		13.9	□□□□□ -0.18
RBM4-205	ENST00000409406	MEA1	Q16626	185 aa		13.9	□□□□□ -0.18
RBM4-205	ENST00000409406	IQCE	Q6IPM2	695 aa		13.9	□□□□□ -0.18
RBM4-205	ENST00000409406	DPP9	Q86TI2	863 aa		13.9	□□□□□ -0.18
RBM4-205	ENST00000409406	C12orf56	Q8IXR9	622 aa		13.9	□□□□□ -0.18
RBM4-205	ENST00000409406	SH2D3C	Q8N5H7	860 aa		13.9	□□□□□ -0.18
RBM4-205	ENST00000409406	SLC17A8	Q8NDX2	589 aa		13.9	□□□□□ -0.18
RBM4-205	ENST00000409406	ZSWIM2	Q8NEG5	633 aa		13.9	□□□□□ -0.18
RBM4-205	ENST00000409406	NPLOC4	Q8TAT6	608 aa		13.9	□□□□□ -0.18
RBM4-205	ENST00000409406	BAP1	Q92560	729 aa		13.9	□□□□□ -0.18
RBM4-205	ENST00000409406	RUBCN	Q92622	972 aa		13.9	□□□□□ -0.18
RBM4-205	ENST00000409406	HINFP	Q9BQA5	517 aa		13.9	□□□□□ -0.18
RBM4-205	ENST00000409406	ZNF236	Q9UL36	1845 aa		13.9	□□□□□ -0.18
RBM4-205	ENST00000409406	EVPL	Q92817	2033 aa		13.89	□□□□□ -0.19
RBM4-205	ENST00000409406	DENND3	A2RUS2	1198 aa		13.89	□□□□□ -0.19
RBM4-205	ENST00000409406	FAM155A	B1AL88	458 aa	Predicted RBP	13.89	□□□□□ -0.19
RBM4-205	ENST00000409406	ZBTB42	B2RXF5	422 aa		13.89	□□□□□ -0.19
RBM4-205	ENST00000409406	ANKRD63	C9JTQ0	380 aa		13.89	□□□□□ -0.19
RBM4-205	ENST00000409406	NOP56	O00567	594 aa	Known RBP	13.89	□□□□□ -0.19
RBM4-205	ENST00000409406	ADSS	P30520	456 aa		13.89	□□□□□ -0.19
RBM4-205	ENST00000409406	DRP2	Q13474	957 aa		13.89	□□□□□ -0.19
RBM4-205	ENST00000409406	CCDC122	Q5T0U0	273 aa		13.89	□□□□□ -0.19
RBM4-205	ENST00000409406	KDM7A	Q6ZMT4	941 aa		13.89	□□□□□ -0.19
RBM4-205	ENST00000409406	TAS1R3	Q7RTX0	852 aa		13.89	□□□□□ -0.19
RBM4-205	ENST00000409406	PLPPR4	Q7Z2D5	763 aa		13.89	□□□□□ -0.19
RBM4-205	ENST00000409406	CEP57	Q86XR8	500 aa		13.89	□□□□□ -0.19
RBM4-205	ENST00000409406	MAP4K3	Q8IVH8	894 aa		13.89	□□□□□ -0.19
RBM4-205	ENST00000409406	IQCD	Q96DY2	449 aa		13.89	□□□□□ -0.19
RBM4-205	ENST00000409406	PCIF1	Q9H4Z3	704 aa		13.89	□□□□□ -0.19
RBM4-205	ENST00000409406	AZI2	Q9H6S1	392 aa		13.89	□□□□□ -0.19
RBM4-205	ENST00000409406	VTA1	Q9NP79	307 aa		13.89	□□□□□ -0.19
RBM4-205	ENST00000409406	NRBP2	Q9NSY0	501 aa		13.89	□□□□□ -0.19
RBM4-205	ENST00000409406	ARHGAP28	Q9P2N2	729 aa		13.89	□□□□□ -0.19
RBM4-205	ENST00000409406	TFR2	Q9UP52	801 aa		13.89	□□□□□ -0.19
RBM4-205	ENST00000409406		A0A1B0GUA9	196 aa		13.89	□□□□□ -0.19
RBM4-205	ENST00000409406	AFP	P02771	609 aa	Known RBP	13.89	□□□□□ -0.19
RBM4-205	ENST00000409406	MARK3	P27448	753 aa		13.89	□□□□□ -0.19
RBM4-205	ENST00000409406	ARL2	P36404	184 aa		13.89	□□□□□ -0.19
RBM4-205	ENST00000409406	TAF1C	Q15572	869 aa	Predicted RBP	13.89	□□□□□ -0.19
RBM4-205	ENST00000409406	PTGIS	Q16647	500 aa		13.89	□□□□□ -0.19
RBM4-205	ENST00000409406	DCAF17	Q5H9S7	520 aa	Predicted RBP	13.89	□□□□□ -0.19
RBM4-205	ENST00000409406	TLDC1	Q6P9B6	456 aa		13.89	□□□□□ -0.19
RBM4-205	ENST00000409406	PARP9	Q8IXQ6	854 aa		13.89	□□□□□ -0.19
RBM4-205	ENST00000409406	MMGT1	Q8N4V1	131 aa		13.89	□□□□□ -0.19
RBM4-205	ENST00000409406	ASAP3	Q8TDY4	903 aa		13.89	□□□□□ -0.19
RBM4-205	ENST00000409406	GLG1	Q92896	1179 aa		13.89	□□□□□ -0.19
RBM4-205	ENST00000409406	RNPC3	Q96LT9	517 aa	Known RBP	13.89	□□□□□ -0.19
RBM4-205	ENST00000409406	GGA2	Q9UJY4	613 aa		13.89	□□□□□ -0.19
RBM4-205	ENST00000409406	EMSY	Q7Z589	1322 aa		13.88	□□□□□ -0.19
RBM4-205	ENST00000409406	SI	P14410	1827 aa		13.88	□□□□□ -0.19
RBM4-205	ENST00000409406	DCAF8L1	A6NGE4	600 aa		13.88	□□□□□ -0.19
RBM4-205	ENST00000409406	EXOC3	O60645	756 aa		13.88	□□□□□ -0.19
RBM4-205	ENST00000409406	GLRA2	P23416	452 aa		13.88	□□□□□ -0.19
RBM4-205	ENST00000409406	CNGA1	P29973	690 aa		13.88	□□□□□ -0.19
RBM4-205	ENST00000409406	HNRNPH3	P31942	346 aa	Known RBP	13.88	□□□□□ -0.19
RBM4-205	ENST00000409406	ADCYAP1R1	P41586	468 aa		13.88	□□□□□ -0.19
RBM4-205	ENST00000409406	EPHB4	P54760	987 aa		13.88	□□□□□ -0.19
RBM4-205	ENST00000409406	MAP2K1	Q02750	393 aa	Predicted RBP	13.88	□□□□□ -0.19
RBM4-205	ENST00000409406	BIRC2	Q13490	618 aa		13.88	□□□□□ -0.19
RBM4-205	ENST00000409406	TCERG1L	Q5VWI1	586 aa		13.88	□□□□□ -0.19
RBM4-205	ENST00000409406	SLC39A4	Q6P5W5	647 aa		13.88	□□□□□ -0.19
RBM4-205	ENST00000409406	FAM228A	Q86W67	206 aa		13.88	□□□□□ -0.19
RBM4-205	ENST00000409406	IFNL1	Q8IU54	200 aa		13.88	□□□□□ -0.19
RBM4-205	ENST00000409406	RDH13	Q8NBN7	331 aa		13.88	□□□□□ -0.19

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