RNA–Protein interactions for RNA: ENST00000409057.5

PBRM1-205, Transcript of polybromo 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PBRM1, Length 4,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-205ENST00000409057 TRIM49P0CI25 452 aa11.35□□□□□ -0.59
PBRM1-205ENST00000409057 TRIM49CP0CI26 452 aa11.35□□□□□ -0.59
PBRM1-205ENST00000409057 KIF22Q14807 665 aa11.35□□□□□ -0.59
PBRM1-205ENST00000409057 TMEM259Q4ZIN3 620 aa11.35□□□□□ -0.59
PBRM1-205ENST00000409057 RC3H1Q5TC82 1133 aaKnown RBP11.35□□□□□ -0.59
PBRM1-205ENST00000409057 ZNF512BQ96KM6 892 aaPredicted RBP11.35□□□□□ -0.59
PBRM1-205ENST00000409057 ING2Q9H160 280 aa11.35□□□□□ -0.59
PBRM1-205ENST00000409057 FEM1BQ9UK73 627 aa11.35□□□□□ -0.59
PBRM1-205ENST00000409057 A0A1W2PQJ5 194 aa11.35□□□□□ -0.59
PBRM1-205ENST00000409057 ITIH2P19823 946 aa11.35□□□□□ -0.59
PBRM1-205ENST00000409057 SMARCA1P28370 1054 aa11.35□□□□□ -0.59
PBRM1-205ENST00000409057 CARSP49589 748 aaKnown RBP11.35□□□□□ -0.59
PBRM1-205ENST00000409057 Q3C1V9 767 aa11.35□□□□□ -0.59
PBRM1-205ENST00000409057 C16orf87Q6PH81 154 aa11.35□□□□□ -0.59
PBRM1-205ENST00000409057 RYBPQ8N488 228 aaPredicted RBP11.35□□□□□ -0.59
PBRM1-205ENST00000409057 SCG3Q8WXD2 468 aaKnown RBP11.35□□□□□ -0.59
PBRM1-205ENST00000409057 FAM213AQ9BRX8 229 aa11.35□□□□□ -0.59
PBRM1-205ENST00000409057 AP5M1Q9H0R1 490 aa11.35□□□□□ -0.59
PBRM1-205ENST00000409057 RAVER2Q9HCJ3 691 aaKnown RBP11.35□□□□□ -0.59
PBRM1-205ENST00000409057 CPSF3Q9UKF6 684 aaKnown RBP11.35□□□□□ -0.59
PBRM1-205ENST00000409057 ABCB11O95342 1321 aa11.35□□□□□ -0.59
PBRM1-205ENST00000409057 MYO3BQ8WXR4 1341 aa11.35□□□□□ -0.59
PBRM1-205ENST00000409057 OVOS2A0A0J9YW53 1432 aa11.35□□□□□ -0.59
PBRM1-205ENST00000409057 OVOS2Q6IE36 1432 aa11.35□□□□□ -0.59
PBRM1-205ENST00000409057 PHF2O75151 1096 aa11.35□□□□□ -0.59
PBRM1-205ENST00000409057 RTN2O75298 545 aa11.35□□□□□ -0.59
PBRM1-205ENST00000409057 PAMP19021 973 aa11.35□□□□□ -0.59
PBRM1-205ENST00000409057 SLC1A1P43005 524 aa11.35□□□□□ -0.59
PBRM1-205ENST00000409057 SEC24CP53992 1094 aa11.35□□□□□ -0.59
PBRM1-205ENST00000409057 GALCP54803 685 aa11.35□□□□□ -0.59
PBRM1-205ENST00000409057 MAPK6Q16659 721 aa11.35□□□□□ -0.59
PBRM1-205ENST00000409057 PPP1R16BQ96T49 567 aa11.35□□□□□ -0.59
PBRM1-205ENST00000409057 POLR3CQ9BUI4 534 aaPredicted RBP11.35□□□□□ -0.59
PBRM1-205ENST00000409057 KLHL8Q9P2G9 620 aaPredicted RBP11.35□□□□□ -0.59
PBRM1-205ENST00000409057 SLC9A2Q9UBY0 812 aa11.35□□□□□ -0.59
PBRM1-205ENST00000409057 GGT7Q9UJ14 662 aa11.35□□□□□ -0.59
PBRM1-205ENST00000409057 UBE4BO95155 1302 aa11.34□□□□□ -0.59
PBRM1-205ENST00000409057 PMLP29590 882 aa11.34□□□□□ -0.59
PBRM1-205ENST00000409057 RFX5P48382 616 aaPredicted RBP11.34□□□□□ -0.59
PBRM1-205ENST00000409057 RARS2Q5T160 578 aaKnown RBP11.34□□□□□ -0.59
PBRM1-205ENST00000409057 METTL23Q86XA0 190 aa11.34□□□□□ -0.59
PBRM1-205ENST00000409057 GIMAP8Q8ND71 665 aaPredicted RBP11.34□□□□□ -0.59
PBRM1-205ENST00000409057 ZMAT2Q96NC0 199 aaKnown RBP11.34□□□□□ -0.59
PBRM1-205ENST00000409057 TRIM51Q9BSJ1 452 aa11.34□□□□□ -0.59
PBRM1-205ENST00000409057 STK33Q9BYT3 514 aa11.34□□□□□ -0.59
PBRM1-205ENST00000409057 GCOM2Q9BZD3 368 aaPredicted RBP11.34□□□□□ -0.59
PBRM1-205ENST00000409057 SUFUQ9UMX1 484 aa11.34□□□□□ -0.59
PBRM1-205ENST00000409057 EMSYQ7Z589 1322 aa11.34□□□□□ -0.59
PBRM1-205ENST00000409057 CCDC195A0A1B0GUA6 201 aa11.34□□□□□ -0.59
PBRM1-205ENST00000409057 CCT8L1PA6NM43 557 aa11.34□□□□□ -0.59
PBRM1-205ENST00000409057 SLC16A3O15427 465 aaKnown RBP11.34□□□□□ -0.59
PBRM1-205ENST00000409057 GNA15P30679 374 aa11.34□□□□□ -0.59
PBRM1-205ENST00000409057 GPSM2P81274 684 aa11.34□□□□□ -0.59
PBRM1-205ENST00000409057 NAB2Q15742 525 aa11.34□□□□□ -0.59
PBRM1-205ENST00000409057 PTGISQ16647 500 aa11.34□□□□□ -0.59
PBRM1-205ENST00000409057 HIF1AQ16665 826 aa11.34□□□□□ -0.59
PBRM1-205ENST00000409057 WDR93Q6P2C0 686 aa11.34□□□□□ -0.59
PBRM1-205ENST00000409057 HPS3Q969F9 1004 aa11.34□□□□□ -0.59
PBRM1-205ENST00000409057 LXNQ9BS40 222 aa11.34□□□□□ -0.59
PBRM1-205ENST00000409057 SLC13A1Q9BZW2 595 aa11.34□□□□□ -0.59
PBRM1-205ENST00000409057 ISCUQ9H1K1 167 aa11.34□□□□□ -0.59
PBRM1-205ENST00000409057 CYP4F11Q9HBI6 524 aa11.34□□□□□ -0.59
PBRM1-205ENST00000409057 L3MBTL1Q9Y468 752 aa11.34□□□□□ -0.59
PBRM1-205ENST00000409057 FHOD1Q9Y613 1164 aa11.34□□□□□ -0.59
PBRM1-205ENST00000409057 PTPRMP28827 1452 aa11.34□□□□□ -0.59
PBRM1-205ENST00000409057 RAD51CO43502 376 aa11.34□□□□□ -0.59
PBRM1-205ENST00000409057 KCNQ2O43526 872 aa11.34□□□□□ -0.59
PBRM1-205ENST00000409057 ECE2O60344 883 aa11.34□□□□□ -0.59
PBRM1-205ENST00000409057 CTDNEP1O95476 244 aa11.34□□□□□ -0.59
PBRM1-205ENST00000409057 HNRNPH1P31943 449 aaKnown RBP11.34□□□□□ -0.59
PBRM1-205ENST00000409057 PAPOLAP51003 745 aaKnown RBP11.34□□□□□ -0.59
PBRM1-205ENST00000409057 ARSEP51690 589 aa11.34□□□□□ -0.59
PBRM1-205ENST00000409057 STK4Q13043 487 aa11.34□□□□□ -0.59
PBRM1-205ENST00000409057 HIC1Q14526 733 aa11.34□□□□□ -0.59
PBRM1-205ENST00000409057 GPR162Q16538 588 aa11.34□□□□□ -0.59
PBRM1-205ENST00000409057 SBK1Q52WX2 424 aa11.34□□□□□ -0.59
PBRM1-205ENST00000409057 SLC30A9Q6PML9 568 aa11.34□□□□□ -0.59
PBRM1-205ENST00000409057 RASSF3Q86WH2 238 aa11.34□□□□□ -0.59
PBRM1-205ENST00000409057 NSUN6Q8TEA1 469 aaKnown RBP11.34□□□□□ -0.59
PBRM1-205ENST00000409057 EIF2AK1Q9BQI3 630 aaKnown RBP11.34□□□□□ -0.59
PBRM1-205ENST00000409057 RNF146Q9NTX7 359 aa11.34□□□□□ -0.59
PBRM1-205ENST00000409057 ASAP2O43150 1006 aa11.34□□□□□ -0.59
PBRM1-205ENST00000409057 UCHL3P15374 230 aa11.34□□□□□ -0.59
PBRM1-205ENST00000409057 SFNP31947 248 aa11.34□□□□□ -0.59
PBRM1-205ENST00000409057 NFIXQ14938 502 aa11.34□□□□□ -0.59
PBRM1-205ENST00000409057 STXBP2Q15833 593 aa11.34□□□□□ -0.59
PBRM1-205ENST00000409057 OR2W6PQ8NHA6 318 aa11.34□□□□□ -0.59
PBRM1-205ENST00000409057 SLC35G2Q8TBE7 412 aa11.34□□□□□ -0.59
PBRM1-205ENST00000409057 FAM167AQ96KS9 214 aa11.34□□□□□ -0.59
PBRM1-205ENST00000409057 ROPN1BQ9BZX4 212 aaPredicted RBP11.34□□□□□ -0.59
PBRM1-205ENST00000409057 ROPN1Q9HAT0 212 aaPredicted RBP11.34□□□□□ -0.59
PBRM1-205ENST00000409057 UVRAGQ9P2Y5 699 aa11.34□□□□□ -0.59
PBRM1-205ENST00000409057 TRAF3IP3Q9Y228 551 aa11.34□□□□□ -0.59
PBRM1-205ENST00000409057 MYO3AQ8NEV4 1616 aa11.33□□□□□ -0.6
PBRM1-205ENST00000409057 BCAR1P56945 870 aa11.33□□□□□ -0.6
PBRM1-205ENST00000409057 YWHAHQ04917 246 aaPredicted RBP11.33□□□□□ -0.6
PBRM1-205ENST00000409057 SF3B3Q15393 1217 aaKnown RBP11.33□□□□□ -0.6
PBRM1-205ENST00000409057 ZNF699Q32M78 642 aa11.33□□□□□ -0.6
PBRM1-205ENST00000409057 ZNF34Q8IZ26 560 aa11.33□□□□□ -0.6
PBRM1-205ENST00000409057 CATSPER1Q8NEC5 780 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms