RNA–Protein interactions for RNA: ENST00000406109.5

RPA3-204, Transcript of replication protein A3, humanhuman

TSL 3 BASIC

Gene RPA3, Length 434 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-204ENST00000406109 RNF168Q8IYW5 571 aaPredicted RBP6.94□□□□□ -1.3
RPA3-204ENST00000406109 FAM177A1Q8N128 213 aaPredicted RBP6.94□□□□□ -1.3
RPA3-204ENST00000406109 MAP7D2Q96T17 732 aa6.94□□□□□ -1.3
RPA3-204ENST00000406109 ZNF577Q9BSK1 485 aa6.94□□□□□ -1.3
RPA3-204ENST00000406109 RPP25Q9BUL9 199 aaKnown RBP6.94□□□□□ -1.3
RPA3-204ENST00000406109 PHF20Q9BVI0 1012 aa6.94□□□□□ -1.3
RPA3-204ENST00000406109 FOXQ1Q9C009 403 aa6.94□□□□□ -1.3
RPA3-204ENST00000406109 MAN1C1Q9NR34 630 aa6.94□□□□□ -1.3
RPA3-204ENST00000406109 TBC1D22BQ9NU19 505 aa6.94□□□□□ -1.3
RPA3-204ENST00000406109 LHX6Q9UPM6 363 aa6.94□□□□□ -1.3
RPA3-204ENST00000406109 CEP131Q9UPN4 1083 aa6.94□□□□□ -1.3
RPA3-204ENST00000406109 SIT1Q9Y3P8 196 aa6.94□□□□□ -1.3
RPA3-204ENST00000406109 PCDHGA4Q9Y5G9 962 aa6.94□□□□□ -1.3
RPA3-204ENST00000406109 FLNBO75369 2602 aaKnown RBP6.94□□□□□ -1.3
RPA3-204ENST00000406109 PATJQ8NI35 1801 aa6.93□□□□□ -1.3
RPA3-204ENST00000406109 GCN1Q92616 2671 aaKnown RBP6.93□□□□□ -1.3
RPA3-204ENST00000406109 A0A087WZ62 844 aa6.93□□□□□ -1.3
RPA3-204ENST00000406109 CCDC194A0A1B0GVG4 234 aa6.93□□□□□ -1.3
RPA3-204ENST00000406109 TMEM150BA6NC51 233 aa6.93□□□□□ -1.3
RPA3-204ENST00000406109 F8W810 466 aa6.93□□□□□ -1.3
RPA3-204ENST00000406109 TEX28O15482 410 aa6.93□□□□□ -1.3
RPA3-204ENST00000406109 OATP04181 439 aa6.93□□□□□ -1.3
RPA3-204ENST00000406109 PSAPP07602 524 aa6.93□□□□□ -1.3
RPA3-204ENST00000406109 LAMP2P13473 410 aa6.93□□□□□ -1.3
RPA3-204ENST00000406109 TMOD1P28289 359 aa6.93□□□□□ -1.3
RPA3-204ENST00000406109 HOXA11P31270 313 aaPredicted RBP6.93□□□□□ -1.3
RPA3-204ENST00000406109 CIITAP33076 1130 aa6.93□□□□□ -1.3
RPA3-204ENST00000406109 KRT2P35908 639 aa6.93□□□□□ -1.3
RPA3-204ENST00000406109 USP11P51784 963 aa6.93□□□□□ -1.3
RPA3-204ENST00000406109 ATXN1P54253 815 aaKnown RBP6.93□□□□□ -1.3
RPA3-204ENST00000406109 STARD6P59095 220 aa6.93□□□□□ -1.3
RPA3-204ENST00000406109 HMGN5P82970 282 aaKnown RBP6.93□□□□□ -1.3
RPA3-204ENST00000406109 PRKCEQ02156 737 aa6.93□□□□□ -1.3
RPA3-204ENST00000406109 HTR4Q13639 388 aa6.93□□□□□ -1.3
RPA3-204ENST00000406109 NONOQ15233 471 aaKnown RBP eCLIP6.93□□□□□ -1.3
RPA3-204ENST00000406109 SAFBQ15424 915 aaKnown RBP eCLIP6.93□□□□□ -1.3
RPA3-204ENST00000406109 PRR16Q569H4 304 aa6.93□□□□□ -1.3
RPA3-204ENST00000406109 KIAA0319Q5VV43 1072 aa6.93□□□□□ -1.3
RPA3-204ENST00000406109 GLB1LQ6UWU2 654 aa6.93□□□□□ -1.3
RPA3-204ENST00000406109 KRT25Q7Z3Z0 450 aa6.93□□□□□ -1.3
RPA3-204ENST00000406109 MRPL10Q7Z7H8 261 aaKnown RBP6.93□□□□□ -1.3
RPA3-204ENST00000406109 TMEM87AQ8NBN3 555 aa6.93□□□□□ -1.3
RPA3-204ENST00000406109 DAGLBQ8NCG7 672 aa6.93□□□□□ -1.3
RPA3-204ENST00000406109 ST13P5Q8NFI4 369 aaPredicted RBP6.93□□□□□ -1.3
RPA3-204ENST00000406109 PJA1Q8NG27 643 aa6.93□□□□□ -1.3
RPA3-204ENST00000406109 OXER1Q8TDS5 423 aa6.93□□□□□ -1.3
RPA3-204ENST00000406109 TBCKQ8TEA7 893 aa6.93□□□□□ -1.3
RPA3-204ENST00000406109 NLRP7Q8WX94 980 aa6.93□□□□□ -1.3
RPA3-204ENST00000406109 RSPH1Q8WYR4 309 aa6.93□□□□□ -1.3
RPA3-204ENST00000406109 NELL1Q92832 810 aa6.93□□□□□ -1.3
RPA3-204ENST00000406109 GJA10Q969M2 543 aa6.93□□□□□ -1.3
RPA3-204ENST00000406109 NXPE3Q969Y0 559 aa6.93□□□□□ -1.3
RPA3-204ENST00000406109 C8orf76Q96K31 380 aa6.93□□□□□ -1.3
RPA3-204ENST00000406109 FAM167AQ96KS9 214 aa6.93□□□□□ -1.3
RPA3-204ENST00000406109 RPS6KC1Q96S38 1066 aa6.93□□□□□ -1.3
RPA3-204ENST00000406109 FDXACB1Q9BRP7 624 aaPredicted RBP6.93□□□□□ -1.3
RPA3-204ENST00000406109 DDX23Q9BUQ8 820 aaKnown RBP6.93□□□□□ -1.3
RPA3-204ENST00000406109 EMILIN2Q9BXX0 1053 aa6.93□□□□□ -1.3
RPA3-204ENST00000406109 GBP3Q9H0R5 595 aa6.93□□□□□ -1.3
RPA3-204ENST00000406109 IFT122Q9HBG6 1241 aa6.93□□□□□ -1.3
RPA3-204ENST00000406109 BRMS1Q9HCU9 246 aa6.93□□□□□ -1.3
RPA3-204ENST00000406109 ARHGEF3Q9NR81 526 aa6.93□□□□□ -1.3
RPA3-204ENST00000406109 SLC2A4RGQ9NR83 387 aa6.93□□□□□ -1.3
RPA3-204ENST00000406109 FAM105AQ9NUU6 356 aa6.93□□□□□ -1.3
RPA3-204ENST00000406109 MARCH5Q9NX47 278 aa6.93□□□□□ -1.3
RPA3-204ENST00000406109 INPP5FQ9Y2H2 1132 aa6.93□□□□□ -1.3
RPA3-204ENST00000406109 MTF2Q9Y483 593 aaPredicted RBP6.93□□□□□ -1.3
RPA3-204ENST00000406109 CLUHO75153 1309 aa6.93□□□□□ -1.3
RPA3-204ENST00000406109 KALRNO60229 2985 aa6.92□□□□□ -1.3
RPA3-204ENST00000406109 CARNS1A5YM72 827 aa6.92□□□□□ -1.3
RPA3-204ENST00000406109 WDR64B1ANS9 1081 aa6.92□□□□□ -1.3
RPA3-204ENST00000406109 BTBD18B2RXH4 712 aa6.92□□□□□ -1.3
RPA3-204ENST00000406109 M0R2N6 131 aa6.92□□□□□ -1.3
RPA3-204ENST00000406109 C2CD2LO14523 706 aa6.92□□□□□ -1.3
RPA3-204ENST00000406109 NRP1O14786 923 aa6.92□□□□□ -1.3
RPA3-204ENST00000406109 INPPL1O15357 1258 aa6.92□□□□□ -1.3
RPA3-204ENST00000406109 MSH4O15457 936 aa6.92□□□□□ -1.3
RPA3-204ENST00000406109 SOD2P04179 222 aa6.92□□□□□ -1.3
RPA3-204ENST00000406109 SPATA31D3P0C874 917 aa6.92□□□□□ -1.3
RPA3-204ENST00000406109 MYBP10242 640 aa6.92□□□□□ -1.3
RPA3-204ENST00000406109 GBP2P32456 591 aaPredicted RBP6.92□□□□□ -1.3
RPA3-204ENST00000406109 RNASELQ05823 741 aaKnown RBP6.92□□□□□ -1.3
RPA3-204ENST00000406109 NR5A1Q13285 461 aa6.92□□□□□ -1.3
RPA3-204ENST00000406109 GNL2Q13823 731 aaKnown RBP6.92□□□□□ -1.3
RPA3-204ENST00000406109 NPY5RQ15761 445 aa6.92□□□□□ -1.3
RPA3-204ENST00000406109 INF2Q27J81 1249 aa6.92□□□□□ -1.3
RPA3-204ENST00000406109 ZNF528Q3MIS6 628 aa6.92□□□□□ -1.3
RPA3-204ENST00000406109 UBXN11Q5T124 520 aa6.92□□□□□ -1.3
RPA3-204ENST00000406109 TWF2Q6IBS0 349 aaKnown RBP6.92□□□□□ -1.3
RPA3-204ENST00000406109 LILRA6Q6PI73 481 aa6.92□□□□□ -1.3
RPA3-204ENST00000406109 DCLRE1AQ6PJP8 1040 aa6.92□□□□□ -1.3
RPA3-204ENST00000406109 ZC3H14Q6PJT7 736 aaKnown RBP6.92□□□□□ -1.3
RPA3-204ENST00000406109 B3GNT9Q6UX72 402 aa6.92□□□□□ -1.3
RPA3-204ENST00000406109 CYP26C1Q6V0L0 522 aa6.92□□□□□ -1.3
RPA3-204ENST00000406109 SPATA31D4Q6ZUB0 917 aa6.92□□□□□ -1.3
RPA3-204ENST00000406109 PIK3AP1Q6ZUJ8 805 aa6.92□□□□□ -1.3
RPA3-204ENST00000406109 KSR1Q8IVT5 923 aa6.92□□□□□ -1.3
RPA3-204ENST00000406109 DIS3L2Q8IYB7 885 aaKnown RBP6.92□□□□□ -1.3
RPA3-204ENST00000406109 TMC2Q8TDI7 906 aa6.92□□□□□ -1.3
RPA3-204ENST00000406109 FGF14Q92915 247 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms